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arXiv · 1009.1078

Discrete Nonlinear Schrodinger Equation, Solitons and Organizing Principles for Protein Folding

Nora Molkenthin·Shuangwei Hu·Antti J. Niemi
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Abstract

We introduce a novel generalization of the discrete nonlinear Schrödinger equation. It supports solitons that describe how proteins fold. As an example we scrutinize the villin headpiece HP35, an archetypal protein for testing both experimental and theoretical approaches to protein folding. Using explicit soliton profiles we construct its carbon backbone with an unprecedented accuracy.

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Nora Molkenthin, Shuangwei Hu, Antti J. Niemi. 2010-09-06. Discrete Nonlinear Schrodinger Equation, Solitons and Organizing Principles for Protein Folding. https://doi.org/10.1103/physrevlett.106.078102

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