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arXiv · 1210.3771

Detecting the homology of DNA-sequences based on the variety of optimal alignments: a case study

Erik Hirmo·Jüri Lember·Heinrich Matzinger
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Abstract

We consider a novel approach of measuring the homology of DNA sequences based of the variety of optimal alignments in the longest common subsequence sense. The proposed approach is compared with BLAST in measuring the homology of four genes.

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Erik Hirmo, Jüri Lember, Heinrich Matzinger. 2012-10-14. Detecting the homology of DNA-sequences based on the variety of optimal alignments: a case study. https://arxiv.org/abs/1210.3771

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