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arXiv · 1411.0297

A simple model for the distribution of plasmid lengths

Alice Ledda·Luca Ferretti
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Abstract

Plasmids are major players in Horizontal Gene Transfer mechanisms, hence they are highly variable in their gene content and length. We propose a model for the fitness of a plasmid as a function of its length, which predicts diminishing returns. We infer the distribution of plasmid lengths by a simple evolutionary model and we show that there is a positive correlation between the presence and efficiency of the conjugation machinery and the length of the plasmid. The model predicts an "insertion load" on plasmids, which could explain also the fact that plasmids are widespread in bacterial populations but rarely established. Finally we discuss how the typical length of plasmids increases with the amount of stress in the environment, focusing on the recent human-driven increase in antibiotic concentrations.

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Alice Ledda, Luca Ferretti. 2014-11-02. A simple model for the distribution of plasmid lengths. https://arxiv.org/abs/1411.0297

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