Search arXivSearch

arXiv · 1506.02958

SASfit: A comprehensive tool for small-angle scattering data analysis

Abstract

Small-angle X-ray and neutron scattering experiments are used in many fields of the life sciences and condensed matter research to obtain answers to questions about the shape and size of nano-sized structures, typically in the range of 1 to 100 nm. It provides good statistics for large numbers of structural units for short measurement times. With the ever-increasing quantity and quality of data acquisition, the value of appropriate tools that are able to extract valuable information is steadily increasing. SASfit has been one of the mature programs for small-angle scattering data analysis available for many years. We describe the basic data processing and analysis work-flow along with recent developments in the SASfit program package (version 0.94.6). They include (i) advanced algorithms for reduction of oversampled data sets (ii) improved confidence assessment in the optimized model parameters and (iii) a flexible plug-in system for custom user-provided models. A scattering function of a mass fractal model of branched polymers in solution is provided as an example for implementing a plug-in. The new SASfit release is available for major platforms such as Windows, Linux and Mac OS X. To facilitate documentation, it includes improved indexed user documentation as well as a web-based wiki for peer collaboration and online videos for introduction of basic usage. The usage of SASfit is illustrated by interpretation of the small-angle X-ray scattering curves of monomodal gold nanoparticles (NIST reference material 8011) and bimodal silica nanoparticles (EU reference material ERM-FD-102).

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Ingo Breßler, Joachim Kohlbrecher, Andreas F. Thünemann. 2015-06-09. SASfit: A comprehensive tool for small-angle scattering data analysis. https://arxiv.org/abs/1506.02958

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Learning to bin: differentiable and Bayesian optimization for multi-dimensional discriminants in high-energy physics

Categorizing events using discriminant observables is central to many high-energy physics analyses. Yet, bin boundaries are often chosen manually. A simple, popular choice in multi-classification tasks is to assign events according to the largest per-class score ("argmax") and to apply equidistant binning to the resulting one-dimensional discriminants. We propose a binning optimization for signal significance directly in multi-dimensional discriminants. We use a Gaussian Mixture Model (GMM) to define flexible regions in the score space, which can be interpreted either as bins or as analysis categories. While this GMM-based strategy is applicable in both one and multiple dimensions, we also study a direct bin-boundary optimization in one dimension as a simpler alternative for binary discriminants. On this binning model, we study two optimization strategies: a differentiable and a Bayesian optimization approach. We study two toy setups: a binary classification and a three-class problem with two signals and backgrounds. In the one-dimensional case, both approaches achieve similar gains in signal sensitivity compared to equidistant binning for a given number of bins, while in the multi-dimensional case the differentiable approach performs best. We show that the GMM-based optimization can outperform argmax classification even after optimized binning is applied to the one-dimensional projections. We further study the performance of our methods on the FAIR Universe $H\rightarrowττ$ dataset, where the GMM-based optimization gives the highest signal significance. Both methods are released as lightweight Python plugins intended for straightforward integration into existing analyses.

physics.data-an

When Should Team KPIs Be Absolute or Relative for Match-Outcome Prediction?

In rugby union and association football, team key performance indicators (KPIs) can be represented in absolute terms or relative to the opponent. Relativisation sometimes improves match-outcome prediction and sometimes harms it. There has been no general account of when each occurs. The answer depends on how much the two teams differ in variability and how strongly their KPI values rise and fall together. We combine these properties into the Paired Efficiency Factor (PEF), which generalises Fisher's paired-efficiency result to the unequal-variance conditions typical of competitive sport. The PEF also connects a KPI's statistical efficiency to how much information its relative form carries about the outcome. Combined KPIs can interact in complex ways, so we analyse each indicator on its own. Across 86 team KPIs from professional rugby union and association football, the PEF places every metric in one of four regimes. Anti-correlation is common, especially for high-volume competitive counts, and absolute measures are then usually preferable. Relativisation can still improve prediction when a noisier difference carries more outcome information. An idealised simulation and one representative KPI from each regime confirm both signs under team-blocked cross-validation. The same pairing geometry appears in healthcare, genomics, finance, and manufacturing. The PEF turns an ad hoc feature-engineering choice into a transparent, data-informed diagnostic for when to relativise performance metrics and when not to.

physics.data-an

Comparison of Image Processing Models in Quark Gluon Jet Classification

Quark-gluon discrimination provides a useful test case for studying how different machine-learning architectures learn the spatial structure of QCD radiation. In this work, we compare convolutional neural network (CNN), Vision Transformers (ViT), and hierarchical Swin Transformers using the same three-channel jet-image representation, consisting of charged-particle momentum, neutral-particle momentum, and charged-particle multiplicity from PYTHIA 8 jets. We study their performance for different training-set sizes and fine-tuning configurations, with particular attention to the role of local and global information in the jet images. CNN and Swin models consistently perform better than ViT in the cases studied. Since both CNN and Swin retain a strong local component in their architectures, this suggests that local jet substructure plays an important role in quark-gluon discrimination. The performance of the hierarchical Swin model also suggests that combining local features over larger spatial scales is useful. Block-wise fine-tuning improves the performance of the Transformer models, although the improvement becomes smaller and the training less stable as more blocks are unfrozen. We also find that self-supervised Momentum Contrast (MoCo) pretraining improves the model initialization, particularly when the amount of labeled training data is limited. Based on these observations, we developed a smaller Swin model adopted to the jet-image representation used in this study. It achieves comparable performance with substantially fewer parameters. The results show that it is important to adapt the model architecture and training procedure to the specific input characteristics of High Energy Physics (HEP) data when applying vision models in HEP.

physics.data-an