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arXiv · 1603.01739

Grading of Mammalian Cumulus Oocyte Complexes using Machine Learning for in Vitro Embryo Culture

Viswanath P Sudarshan·Tobias Weiser·Phalgun Chintala·Subhamoy Mandal·Rahul Dutta
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Abstract

Visual observation of Cumulus Oocyte Complexes provides only limited information about its functional competence, whereas the molecular evaluations methods are cumbersome or costly. Image analysis of mammalian oocytes can provide attractive alternative to address this challenge. However, it is complex, given the huge number of oocytes under inspection and the subjective nature of the features inspected for identification. Supervised machine learning methods like random forest with annotations from expert biologists can make the analysis task standardized and reduces inter-subject variability. We present a semi-automatic framework for predicting the class an oocyte belongs to, based on multi-object parametric segmentation on the acquired microscopic image followed by a feature based classification using random forests.

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Viswanath P Sudarshan, Tobias Weiser, Phalgun Chintala, Subhamoy Mandal, Rahul Dutta. 2016-03-05. Grading of Mammalian Cumulus Oocyte Complexes using Machine Learning for in Vitro Embryo Culture. https://arxiv.org/abs/1603.01739

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