Search arXivSearch

arXiv · 1801.01267

How to estimate the sample mean and standard deviation from the five number summary?

Abstract

In some clinical studies, researchers may report the five number summary (including the sample median, the first and third quartiles, and the minimum and maximum values) rather than the sample mean and standard deviation. To conduct meta-analysis for pooling studies, one needs to first estimate the sample mean and standard deviation from the five number summary. A number of studies have been proposed in the recent literature to solve this problem. However, none of the existing estimators for the standard deviation is satisfactory for practical use. After a brief review of the existing literature, we point out that Wan et al.'s method (BMC Med Res Methodol 14:135, 2014) has a serious limitation in estimating the standard deviation from the five number summary. To improve it, we propose a smoothly weighted estimator by incorporating the sample size information and derive the optimal weight for the new estimator. For ease of implementation, we also provide an approximation formula of the optimal weight and a shortcut formula for estimating the standard deviation from the five number summary. The performance of the proposed estimator is evaluated through two simulation studies. In comparison with Wan et al.'s estimator, our new estimator provides a more accurate estimate for normal data and performs favorably for non-normal data. In real data analysis, our new method is also able to provide a more accurate estimate of the true sample standard deviation than the existing method. In this paper, we propose an optimal estimator of the standard deviation from the five number summary. Together with the optimal mean estimator in Luo et al. (Stat Methods Med Res, in press, 2017), our new methods have improved the existing literature and will make a solid contribution to meta-analysis and evidence-based medicine.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Jiandong Shi, Dehui Luo, Hong Weng, Xian-Tao Zeng, Lu Lin, Tiejun Tong. 2018-01-04. How to estimate the sample mean and standard deviation from the five number summary?. https://arxiv.org/abs/1801.01267

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Bias-Correction for Privacy-Protected Spatial Autoregressive Models with Application to Restaurant Network Analysis

Spatial autoregressive (SAR) models and their extensions are important tools for studying network effects. However, with an increasing emphasis on data privacy, data providers often implement protection measures that render standard SAR models inapplicable. In this study, we introduce a privacy-protected SAR model that incorporates noise into both the response and covariates to meet privacy requirements. With noise present in both components, the traditional quasi-maximum likelihood estimator becomes difficult to compute because the likelihood function cannot be directly formulated. To bypass this hurdle, we begin with a pseudo-likelihood approach, initially omitting the noise in the covariates. A Newton-Raphson algorithm is then applied to compute the estimator; however, the estimator is biased. To address this, we propose a bias-corrected Newton-Raphson-type algorithm that simultaneously accounts for noise in both the response and covariates. We further show, under appropriate regularity conditions, that the resulting estimator is consistent and asymptotically normal. To further enhance computational efficiency, we also develop a bias-corrected least squares estimator. Several extensions are discussed, and the finite-sample performance of the proposed methods is evaluated through extensive simulations. We apply the proposed methodology to restaurant transaction data from a third-party payment platform. Our method identifies a statistically significant competitive network effect among restaurants and further reveals meaningful restaurant-customer interaction patterns.

stat.ME

A variational framework for modal estimation

Multivariate mode estimation arises in many statistical problems such as inverse problems, multimodal sampling, and density-based clustering, but becomes challenging in moderate to high dimensions, especially when the underlying density is not directly evaluable. We introduce GERVE (Gibbs-measure Entropy-Regularized Variational Estimation), a sample-based method for estimating multivariate modes by approximating Gibbs distributions directly from samples, without estimating or evaluating the density. GERVE uses Gaussian-mixture variational annealing and natural-gradient optimization, producing a mixture concentrated in high-density regions whose component responsibilities also provide a clustering of the observations. We prove theoretical guarantees in two regimes: as the Gibbs temperature goes to zero, the optimal variational mixture concentrates around the global modes of the population density; at fixed positive temperature, we prove existence, consistency, and asymptotic normality of empirical maximizers and propose a bootstrap procedure for uncertainty quantification. Simulations and a real-data experiment show that GERVE accurately recovers modes and produces meaningful clusters.

stat.ME

Objective Model Prior Probabilities in Variable Selection

For many years it was routine to use equal model prior probabilities in Bayesian model uncertainty analysis. At least twenty years ago it became clear that this was problematic, leading to support of much too large models in the increasingly huge model spaces being considered in genomics and other fields. A popular replacement was to adopt a suggestion of Harold Jeffreys for the variable selection problem in which a total of $k$ possible variables are being considered for inclusion in the model: give the collection of all models containing $d$ variables ($d = 0, . . . , k$) prior probability $1/(k + 1)$ and then divide this prior probability equally among the models in the collection. Many other choices of model prior probabilities that impose severe parsimony have also been introduced. We begin by reviewing the problems with using equal model prior probabilities and then discuss some serious problems with the Jeffreys choice. Finally, we introduce and study a number of objective alternative choices of model prior probabilities, from both numerical and theoretical perspectives.

stat.ME