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arXiv · 1905.10979

Scalable K-Medoids via True Error Bound and Familywise Bandits

Aravindakshan Babu·Saurabh Agarwal·Sudarshan Babu·Hariharan Chandrasekaran
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Abstract

K-Medoids(KM) is a standard clustering method, used extensively on semi-metric data.Error analyses of KM have traditionally used an in-sample notion of error,which can be far from the true error and suffer from generalization gap. We formalize the true K-Medoid error based on the underlying data distribution.We decompose the true error into fundamental statistical problems of: minimum estimation (ME) and minimum mean estimation (MME). We provide a convergence result for MME. We show $\errMME$ decreases no slower than $Θ(\frac{1}{n^{\frac{2}{3}}})$, where $n$ is a measure of sample size. Inspired by this bound, we propose a computationally efficient, distributed KM algorithm namely MCPAM. MCPAM has expected runtime $\mathcal{O}(km)$,where $k$ is the number of medoids and $m$ is number of samples. MCPAM provides massive computational savings for a small tradeoff in accuracy. We verify the quality and scaling properties of MCPAM on various datasets. And achieve the hitherto unachieved feat of calculating the KM of 1 billion points on semi-metric spaces.

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Aravindakshan Babu, Saurabh Agarwal, Sudarshan Babu, Hariharan Chandrasekaran. 2019-10-29. Scalable K-Medoids via True Error Bound and Familywise Bandits. https://arxiv.org/abs/1905.10979

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