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arXiv · 2002.09033

Simulation Of Reaction Systems By The Strictly Minimal Ones

Wen Chean Teh·Adrian Atanasiu
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Abstract

Reaction systems, introduced by Ehrenfeucht and Rozenberg, are elementary computational models based on biochemical reactions transpiring within the living cells. Numerous studies focus on mathematical aspects of minimal reaction systems due to their simplicity and rich generative power. In 2014 Manzoni, Pocas, and Porreca showed that every reaction system can be simulated by some minimal reaction system over an extended background set. Motivated by their work, we introduce the concepts of strictly minimal and hybrid reaction systems. Using our new concepts, the result of Manzoni et al. is revisited and strengthened. We also show that extension of the background set by polynomially bounded many elements is not sufficient to guarantee the aforementioned simulation. Finally, an analogous result for strong simulation is obtained.

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Wen Chean Teh, Adrian Atanasiu. 2020-02-16. Simulation Of Reaction Systems By The Strictly Minimal Ones. https://arxiv.org/abs/2002.09033

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