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arXiv · 2003.04726

New advances in enumerative biclustering algorithms with online partitioning

Rosana Veroneze·Fernando J. Von Zuben
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Abstract

This paper further extends RIn-Close_CVC, a biclustering algorithm capable of performing an efficient, complete, correct and non-redundant enumeration of maximal biclusters with constant values on columns in numerical datasets. By avoiding a priori partitioning and itemization of the dataset, RIn-Close_CVC implements an online partitioning, which is demonstrated here to guide to more informative biclustering results. The improved algorithm is called RIn-Close_CVC3, keeps those attractive properties of RIn-Close_CVC, as formally proved here, and is characterized by: a drastic reduction in memory usage; a consistent gain in runtime; additional ability to handle datasets with missing values; and additional ability to operate with attributes characterized by distinct distributions or even mixed data types. The experimental results include synthetic and real-world datasets used to perform scalability and sensitivity analyses. As a practical case study, a parsimonious set of relevant and interpretable mixed-attribute-type rules is obtained in the context of supervised descriptive pattern mining.

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Rosana Veroneze, Fernando J. Von Zuben. 2020-03-07. New advances in enumerative biclustering algorithms with online partitioning. https://arxiv.org/abs/2003.04726

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