Search arXivSearch

arXiv · 2111.09630

Research Notes: Gradient sensing in Bayesian chemotaxis

Abstract

Bayesian chemotaxis is an information-based target search problem inspired by biological chemotaxis. It is defined by a decision strategy coupled to the dynamic estimation of target position from detections of signaling molecules. We extend the case of a point-like agent previously introduced in [Vergassola et al., Nature 2007], which establishes concentration sensing as the dominant contribution to information processing, to the case of a circular agent of small finite size. We identify gradient sensing and a Laplacian correction to concentration sensing as the two leading-order expansion terms in the expected entropy variation. Numerically, we find that the impact of gradient sensing is most relevant because it provides direct directional information to break symmetry in likelihood distributions, which are generally circle-shaped by concentration sensing.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Andrea Auconi, Maja Novak, Benjamin M. Friedrich. 2021-11-18. Research Notes: Gradient sensing in Bayesian chemotaxis. https://doi.org/10.1209/0295-5075%2Fac6620

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Signature of mechanically induced cell extrusions in cell size distribution

How a growing tissue organizes its own homeostatic state is a central question in the physics of living matter. We show that when a growing epithelial sheet counteracts increasing cell density by mechanically squeezing cells out of its plane, a homeostatic in-plane pressure emerges as a generalization of a yield stress. We find that in the quasistatic growth limit the homeostatic state is marginally stable, with a pseudogap in the distribution of local distances to the extrusion threshold pressure. Because such mechanically induced extrusions arise from an instability of individual cells, the pseudogap is imprinted in the distribution of cell areas. This provides an image-based way to test for presence of mechanically induced extrusions and we identify this signature in the developing wing epithelium of \textit{D.~melanogaster}. We expect the same principles to apply to confined three-dimensional tissues.

physics.bio-ph

Fluidization in Growth-Induced Morphogenesis

Elastic buckling has explained shape formation in growing tissues, yet the role of tissue fluidity remains elusive. We derive a minimal fluidized growth-elasticity model as a nonlinear analogue of Maxwell rheology. Analysis of a growing strip reveals a different picture of growth-induced morphogenesis: rather than emerging at a critical stress, symmetry breaking develops continuously during growth. Fluidity regulates stress evolution, the rate of shape-symmetry breaking, and flow patterns, establishing it as an active regulator of morphogenesis beyond its intuitive role in stress relaxation.

physics.bio-ph

The Motile-Units model: Interacting spins model of cell polarization and motility

We introduce a coarse-grained interacting-spin model for two-dimensional cell motility, in which the cell perimeter is discretized into stochastic binary spins that switch between active and inactive states. Each perimeter spin represents a "motile-unit" that is a source of protrusive force and retrograde flow when active. Long-range interactions between the motile-units arise through a polarity cue advected by the collective actin retrograde flow, providing a minimal realization of spontaneous symmetry breaking and self-propulsion. The model exhibits three dynamical phases, a random walk phase, persistent random walk phase, and an intermittent bistable phase characterized by run-and-tumble migration. Additional nearest-neighbor interactions modulate speed and persistence without altering the overall phase structure. Owing to its simplicity, the framework naturally incorporates external cues, reproducing chemotactic migration, steering by localized optogenetic activation, and directional decision-making (symmetry breaking) under competing stimuli. The model introduces a new class of active-particle model in which both speed and polarity emerge from internal stochastic spin dynamics, rather than being imposed as particle-level variables, offering a framework for the study of cell migration and extends the scope of active-matter physics.

physics.bio-ph