Search arXivSearch

arXiv · 2205.06133

Orbital Mixer: Using Atomic Orbital Features for Basis Dependent Prediction of Molecular Wavefunctions

Abstract

Leveraging ab initio data at scale has enabled the development of machine learning models capable of extremely accurate and fast molecular property prediction. A central paradigm of many previous works focuses on generating predictions for only a fixed set of properties. Recent lines of research instead aim to explicitly learn the electronic structure via molecular wavefunctions from which other quantum chemical properties can directly be derived. While previous methods generate predictions as a function of only the atomic configuration, in this work we present an alternate approach that directly purposes basis dependent information to predict molecular electronic structure. The backbone of our model, Orbital Mixer, uses MLP Mixer layers within a simple, intuitive, and scalable architecture and achieves competitive Hamiltonian and molecular orbital energy and coefficient prediction accuracies compared to the state-of-the-art.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Kirill Shmilovich, Devin Willmott, Ivan Batalov, Mordechai Kornbluth, Jonathan Mailoa, J. Zico Kolter. 2022-05-12. Orbital Mixer: Using Atomic Orbital Features for Basis Dependent Prediction of Molecular Wavefunctions. https://doi.org/10.1021/acs.jctc.2c00555

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

A subcell-refined entropy-residual-driven limiting strategy for high-order discontinuous Galerkin methods

Fine-grained, subcell-level dissipation control is essential for achieving robust high-order discontinuous Galerkin (DG) simulations of nonlinear hyperbolic systems in under-resolved regimes while preserving accuracy. This paper proposes a subcell-refined entropy-residual-driven limiting strategy for DG on Legendre-Gauss-Lobatto nodes. The limiter introduces only nearest-neighbor pairwise dissipation within each element, with closed-form coefficients that supply the minimal dissipation required to restore the element entropy inequality. The strategy is a diagonal, locally stable approximation of classical entropy-stable methods, and a generalized subcell framework reveals split-form DG and residual-distribution-based entropy correction schemes as particular choices of the limiting coefficients. For the Euler equations, a physically consistent jump operator separately models thermal and shear entropy production while preserving velocity and pressure equilibrium; a subcell refinement of the Zhang-Shu positivity limiter ensures pointwise positivity. Extensive numerical tests confirm that the scheme maintains optimal high-order accuracy, strictly enforces entropy dissipation, and significantly reduces the difficulty of a posteriori positivity-preserving procedures.

physics.comp-ph

VNS Tokamak for Medical Isotope Production

The Volumetric Neutron Source (VNS) tokamak is a proposed fusion reactor for testing components under fusion neutron irradiation, and has potential use for radioisotope production. The VNS geometry is modeled in the Serpent 2.2.2 and OpenMC 0.15.2 neutronics codes. Coupled neutron-photon simulations compared fluxes, spectra, and selected reaction rates in the blanket and vacuum vessel. Good agreement was found overall, with the largest difference found in (n, 2n) reactions. On an HPC cluster, Serpent 2 was found to have shorter computation time in coupled simulations, while OpenMC was faster in neutron only simulations. Radioisotope production yields were simulated in Serpent 2.2.2 for capsule and Cobalt plate irradiation facilities. Results indicate potential for large volume production of 99Mo, 131I, 225Ac, 177Lu, 192Ir, 64Cu, 67Cu, 161Tb, and 153Sm while 203Pb indicates lower potential. 100Mo and LEU target heating was calculated, suggesting the LEU target mass or the cooling may need adjustment. Optimized 60Co production yielded 1.2 GBq/mg and 100,000 TBq after a 3-year irradiation period. Sensitivity to plant outage for 99Mo, 131I, 177Lu, and 60Co was simulated, suggesting irradiation can be restarted for the same isotope loading and demonstrated long-lived 60Co to be robust to long plant dwell-time.

physics.comp-ph

MadVfold: accelerating NLO event generation and reducing negative weights with SIMD vectorization and GPUs

NLO simulations are essential for LHC physics analyses but are expensive, as they are not only slow but also lead to negative weights, which imply the need to simulate much larger samples of events. Folding is a powerful technique to reduce negative weights but is itself expensive. In this paper I propose ``vectorized folding'' as a new idea to speed up these calculations using SIMD and GPUs, and I present its CUDACPP-based implementation for MG5aMC in MadVfold, including its extension for unfolded NLO event generation. Preliminary results show overall speedups around 6x to 9x with folding and 3x without it. This work is based on a test-centric, LLM-assisted software development process.

physics.comp-ph