Search arXivSearch

arXiv · 2307.00479

Domain Transfer Through Image-to-Image Translation for Uncertainty-Aware Prostate Cancer Classification

Abstract

Prostate Cancer (PCa) is a prevalent disease among men, and multi-parametric MRIs offer a non-invasive method for its detection. While MRI-based deep learning solutions have shown promise in supporting PCa diagnosis, acquiring sufficient training data, particularly in local clinics remains challenging. One potential solution is to take advantage of publicly available datasets to pre-train deep models and fine-tune them on the local data, but multi-source MRIs can pose challenges due to cross-domain distribution differences. These limitations hinder the adoption of explainable and reliable deep-learning solutions in local clinics for PCa diagnosis. In this work, we present a novel approach for unpaired image-to-image translation of prostate multi-parametric MRIs and an uncertainty-aware training approach for classifying clinically significant PCa, to be applied in data-constrained settings such as local and small clinics. Our approach involves a novel pipeline for translating unpaired 3.0T multi-parametric prostate MRIs to 1.5T, thereby augmenting the available training data. Additionally, we introduce an evidential deep learning approach to estimate model uncertainty and employ dataset filtering techniques during training. Furthermore, we propose a simple, yet efficient Evidential Focal Loss, combining focal loss with evidential uncertainty, to train our model effectively. Our experiments demonstrate that the proposed method significantly improves the Area Under ROC Curve (AUC) by over 20% compared to the previous work. Our code is available at https://github.com/med-i-lab/DT_UE_PCa

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Meng Zhou, Amoon Jamzad, Jason Izard, Alexandre Menard, Robert Siemens, Parvin Mousavi. 2024-06-03. Domain Transfer Through Image-to-Image Translation for Uncertainty-Aware Prostate Cancer Classification. https://arxiv.org/abs/2307.00479

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

VideoPulse: Neonatal heart rate and peripheral capillary oxygen saturation (SpO2) estimation from contact free video

Remote photoplethysmography (rPPG) enables contact free monitoring of vital signs and is especially valuable for neonates, since conventional methods often require sustained skin contact with adhesive probes that can irritate fragile skin and increase infection control burden. We present VideoPulse, a neonatal dataset and an end to end pipeline that estimates neonatal heart rate and peripheral capillary oxygen saturation (SpO2) from facial video. VideoPulse contains 157 recordings totaling 2.6 hours from 52 neonates with diverse face orientations. Our pipeline performs face alignment and artifact aware supervision using denoised pulse oximeter signals, then applies 3D CNN backbones for heart rate and SpO2 regression with label distribution smoothing and weighted regression for SpO2. Predictions are produced in 2 second windows. On the NBHR neonatal dataset, we obtain heart rate MAE 2.97 bpm using 2 second windows (2.80 bpm at 6 second windows) and SpO2 MAE 1.69 percent. Under cross dataset evaluation, the NBHR trained heart rate model attains 5.34 bpm MAE on VideoPulse, and fine tuning an NBHR pretrained SpO2 model on VideoPulse yields MAE 1.68 percent. These results indicate that short unaligned neonatal video segments can support accurate heart rate and SpO2 estimation, enabling low cost non invasive monitoring in neonatal intensive care.

eess.IV

Synthetic Fingerprints for Children Under Four: Generation and Biometric Evaluation

Fingerprint recognition in children under four is of interest for longitudinal identity applications, but research in this age range is constrained by the limited availability and sensitivity of real fingerprint data. Synthetic data may provide a useful complementary resource if generated samples are carefully evaluated for biometric quality, similarity to the real training data, and identity diversity. This paper presents an evaluation and selection protocol for synthetic fingerprints generated from a small pediatric dataset. The protocol was applied to 32,000 candidates produced by an age-conditioned generator fine-tuned with 205 fingerprints from nine children. Candidates were evaluated using NFIQ 2, NBIS minutiae extrac-tion and matching, fingerprint-pattern classification, similarity to the complete real reference set, and pairwise similarity among retained synthetic samples. After candidate filtering and a final symmetric pairwise verification, 1,985 synthetic fingerprints remained. The youngest age group continued to produce retained samples within the sampling budget, whereas the oldest original age group produced 24 retained prints. A data-derived two-group age representation improved pattern-distribution agreement for the younger group. Repeated renderings of fixed synthetic iden-tities produced minutiae-based mated scores comparable to the real mated scores, although a DINOv2 texture representation showed substantially greater within-generator similarity. The results indicate that synthetic pediatric fingerprints can support controlled research use, but their evaluation should include both real-to-synthetic similarity and synthetic-to-synthetic diversity, and conclusions should remain specific to the matchers and measurements used.

eess.IV

Adaptive Color Grading

Independent control of tonescale regions (e.g., shadows, highlights) is essential for painters, photographers and cinematographers to bring 2D images to life. In image manipulation software this is most directly addressed by color grading modules, which use intensity thresholds to segment distinct illumination regions for local manipulation. In this work we develop an open source color grading tool and use it to annotate a large dataset of video frames with tonescale region thresholds. Using these thresholds we conduct modeling experiments with strategies based on both practitioners' conventional wisdom and machine learning. Results show that K-nearest neighbors is an effective prediction strategy, outperforming state-of-the-art end-to-end methods for image enhancement. This outcome demonstrates the benefit of focusing on a compact set of core parameters when modeling creative stylization processes. Our adaptive color grading interface and data are available at https://github.com/SamsungLabs/adaptive-color-grading.

eess.IV