Search arXivSearch

arXiv · 2309.13163

Dissimilarity between synchronization processes on networks

Abstract

In this study, we present a general framework for comparing two dynamical processes that describe the synchronization of oscillators coupled through networks of the same size. We introduce a measure of dissimilarity defined in terms of a metric on a hypertorus, allowing us to compare the phases of coupled oscillators. In the first part, this formalism is implemented to examine systems of networked identical phase oscillators that evolve with the Kuramoto model. In particular, we analyze the effect of the weight of an edge in the synchronization of two oscillators, the introduction of new sets of edges in interacting cycles, the effect of bias in the couplings, and the addition of a link in a ring. We also compare the synchronization of nonisomorphic graphs with four nodes. Finally, we explore the dissimilarities generated when we contrast the Kuramoto model with its linear approximation for different random initial phases in deterministic and random networks. The approach introduced provides a general tool for comparing synchronization processes on networks, allowing us to understand the dynamics of a complex system as a consequence of the coupling structure and the processes that can occur in it.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Alejandro P. Riascos. 2024-04-01. Dissimilarity between synchronization processes on networks. https://doi.org/10.1103/physreve.109.044301

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Information geometry of perturbed gradient flow systems on hypergraphs: A perspective towards nonequilibrium physics

This article serves to concisely review the link between gradient flow systems on hypergraphs and information geometry which has been established within the last five years. Gradient flow systems describe a wealth of physical phenomena and provide powerful analytical technquies which are based on the variational energy-dissipation principle. Modern nonequilbrium physics has complemented this classical principle with thermodynamic uncertaintly relations, speed limits, entropy production rate decompositions, and many more. In this article, we formulate these modern principles within the framework of perturbed gradient flow systems on hypergraphs. In particular, we discuss the geometry induced by the Bregman divergence, the physical implications of dual foliations, as well as the corresponding infinitesimal Riemannian geometry for gradient flow systems. Through the geometrical perspective, we are naturally led to new concepts such as moduli spaces for perturbed gradient flow systems and thermodynamical area which is crucial for understanding speed limits. We hope to encourage the readers working in either of the two fields to further expand on and foster the interaction between the two fields.

cond-mat.stat-mech

Kinetic Interference in Translational Control: A Path-Measure Framework for Collision-Triggered Transcript Decay

I connect two literatures developed independently: the path-measure formulation of non-equilibrium statistical mechanics, where a trajectory action decomposes into a time-antisymmetric (entropic) and time-symmetric (frenetic) sector, and the stochastic modelling of ribosomal traffic on messenger RNA. The biological target is a proposed intervention -- antisense oligonucleotide (ASO) interference with wobble-uridine (U34) modification of transfer RNA -- whose intended effect is not to abolish translation but to perturb its timing, driving ribosome collisions and collision-triggered transcript decay preferentially on high-flux, codon-biased transcripts. Dynamical-activity and large-deviation analyses of generic lattice exclusion models -- notably the symmetric and totally asymmetric simple exclusion processes -- are well established. To my knowledge their formalization specifically for ribosomal traffic queues, translation elongation, and collision-triggered no-go decay remains unoccupied; this paper addresses that narrower gap, not the general one. Two claims here are load-bearing and untested. First, selectivity: transcripts whose loss is therapeutically desirable are separable, by vulnerable-codon-pair burden, from transcripts whose loss is toxic. Second, non-redundancy: the frenetic decomposition yields predictions, specific to ribosomal queueing and collision-triggered decay, not already obtainable from rate-level exclusion-process models or existing activity/large-deviation analyses of exclusion processes. This paper establishes neither. It specifies both as falsifiable tests with pre-registered decision rules, including outcomes under which the framework should be abandoned or narrowed. It is a research programme proposal, not a result. No new experimental, computational, or bioinformatic results are reported.

cond-mat.stat-mech

Thermodynamic efficiency of communication channels

We identify a broad class of communication channels that captures common physical constraints in both artificial and natural systems and derive bounds on their thermodynamic cost. We find that the entropy production per channel use is bounded from below by the input-output mutual information, and their ratio -mutual information divided by entropy production- defines the thermodynamic efficiency. Unlike previous studies of energy-constrained communication channels, our analysis shows that thermodynamic costs must be assigned not only to the input symbols themselves, but also to transitions between successive symbols. As a result, maximizing thermodynamic efficiency favors a biased input that switches only rarely, rather than the capacity-achieving input. For the binary symmetric channel, this preference emerges through a pitchfork bifurcation that spontaneously breaks the symmetry of the channel. A minimal model of cellular sensing exhibits the same phenomenon.

cond-mat.stat-mech