Search arXivSearch

arXiv · 2401.14705

Additional Look into GAN-based Augmentation for Deep Learning COVID-19 Image Classification

Abstract

The availability of training data is one of the main limitations in deep learning applications for medical imaging. Data augmentation is a popular approach to overcome this problem. A new approach is a Machine Learning based augmentation, in particular usage of Generative Adversarial Networks (GAN). In this case, GANs generate images similar to the original dataset so that the overall training data amount is bigger, which leads to better performance of trained networks. A GAN model consists of two networks, a generator and a discriminator interconnected in a feedback loop which creates a competitive environment. This work is a continuation of the previous research where we trained StyleGAN2-ADA by Nvidia on the limited COVID-19 chest X-ray image dataset. In this paper, we study the dependence of the GAN-based augmentation performance on dataset size with a focus on small samples. Two datasets are considered, one with 1000 images per class (4000 images in total) and the second with 500 images per class (2000 images in total). We train StyleGAN2-ADA with both sets and then, after validating the quality of generated images, we use trained GANs as one of the augmentations approaches in multi-class classification problems. We compare the quality of the GAN-based augmentation approach to two different approaches (classical augmentation and no augmentation at all) by employing transfer learning-based classification of COVID-19 chest X-ray images. The results are quantified using different classification quality metrics and compared to the results from the literature. The GAN-based augmentation approach is found to be comparable with classical augmentation in the case of medium and large datasets but underperforms in the case of smaller datasets. The correlation between the size of the original dataset and the quality of classification is visible independently from the augmentation approach.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Oleksandr Fedoruk, Konrad Klimaszewski, Aleksander Ogonowski, Michał Kruk. 2024-02-02. Additional Look into GAN-based Augmentation for Deep Learning COVID-19 Image Classification. https://doi.org/10.22630/mgv.2023.32.3.6

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

Hyperspectral Image Restoration and Super-resolution with Physics-Aware Deep Learning for Biomedical Applications

Hyperspectral imaging is a powerful bioimaging tool which can uncover novel insights, thanks to its sensitivity to the intrinsic properties of materials. However, this enhanced contrast comes at the cost of system complexity, constrained by an inherent trade-off between spatial, spectral, and temporal resolution. To overcome this limitation, we present a self-supervised deep learning-based approach that restores and enhances pixel resolution post-acquisition without requiring external training data beyond the images to be restored. Fine-tuned using metrics aligned with the imaging model, our physics-aware method achieves a 16$\times$ pixel super-resolution enhancement and a 12$\times$ imaging speedup without the need of additional training data for transfer learning. Applied to both synthetic and experimental data from five different sample types, including healthy and diseased tissues, we demonstrate that the model preserves biological integrity, as we did not detect systematic loss of biological features or biologically consequential hallucinations in tested datasets. We also concretely demonstrate the model's ability to reveal disease-associated metabolic changes that would otherwise remain undetectable. Furthermore, we provide physical insights into the model's inner workings, paving the way for future refinements that could potentially reveal novel high resolution features in an explainable manner. All methods are available as open-source software on GitHub.

eess.IV

OASIS: Online Adaptive Video Compression via Closed-loop Feedback Control

Computer vision systems are a key building block in an autonomous vehicle, responsible for a range of perception tasks. However, they incur massive data transmission over long communication links from multiple cameras, creating a critical bandwidth and energy bottleneck. Although conventional codecs such as H.264 can reduce data rates, they are ill-suited for real-time vision systems due to high processing latency and energy consumption, as well as their reliance on static user-defined compression settings. In light of these challenges, we propose OASIS, an adaptive video compression framework that integrates lightweight in-sensor compression with task-aware compression ratio control. Based on the real-time task performance, it dynamically updates the optimal compression ratio. Experimental results demonstrate that OASIS generalizes across multiple vision tasks, achieving on average a 6x data compression, 5.8x reduction in link power consumption, and 2.5x reduction in link latency, with at most 1.5% performance degradation.

eess.IV

Echo-E$^3$Net: Efficient Endocardial Spatio-Temporal Network for Ejection Fraction Estimation

Left ventricular ejection fraction (LVEF) is a primary marker of cardiac function. However, routine estimation from endocardial measurements requires manual delineation at end-diastole (ED) and end-systole (ES), a process that is time-consuming and subject to inter-observer variability. Reliable automation is especially valuable for point-of-care ultrasound (POCUS), where computational resources are limited and acquisition quality varies. We propose Echo-E$^3$Net, an anatomy-guided spatio-temporal network that explicitly embeds cardiac anatomy into LVEF prediction. A dual-phase Endocardial Border Detector (E$^2$CBD) uses phase-specific cross-attention to localize ED/ES endocardial landmarks and produce phase-aware landmark embeddings, while an Endocardial Feature Aggregator (E$^2$FA) fuses these embeddings with global statistical descriptors of deep feature maps to refine EF regression. Training is guided by a lightweight geometric loss that uses ED and ES endocardial landmarks to regularize EF prediction. On EchoNet-Dynamic and a PSAX subset of EchoNet-Pediatric, Echo-E$^3$Net attains competitive performance using only 1.55M parameters and 8.05 GFLOPs, an order-of-magnitude compute reduction versus recent baselines, supporting real-time deployment. Our code is publicly available at https://github.com/moeinheidari7829/Echo-E3Net.

eess.IV