Polyp Segmentation Generalisability of Pretrained Backbones

Edward Sanderson; Bogdan J. Matuszewski

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arXiv · 2405.15524

Polyp Segmentation Generalisability of Pretrained Backbones

Edward Sanderson·Bogdan J. Matuszewski

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Abstract

It has recently been demonstrated that pretraining backbones in a self-supervised manner generally provides better fine-tuned polyp segmentation performance, and that models with ViT-B backbones typically perform better than models with ResNet50 backbones. In this paper, we extend this recent work to consider generalisability. I.e., we assess the performance of models on a different dataset to that used for fine-tuning, accounting for variation in network architecture and pretraining pipeline (algorithm and dataset). This reveals how well models with different pretrained backbones generalise to data of a somewhat different distribution to the training data, which will likely arise in deployment due to different cameras and demographics of patients, amongst other factors. We observe that the previous findings, regarding pretraining pipelines for polyp segmentation, hold true when considering generalisability. However, our results imply that models with ResNet50 backbones typically generalise better, despite being outperformed by models with ViT-B backbones in evaluation on the test set from the same dataset used for fine-tuning.

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Edward Sanderson, Bogdan J. Matuszewski. 2024-05-24. Polyp Segmentation Generalisability of Pretrained Backbones. https://arxiv.org/abs/2405.15524

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