Search arXivSearch

arXiv · 2607.24619

Control of morphology and topology in a lattice model of branching morphogenesis

Abstract

We present a lattice model for morphogen-controlled branching morphogenesis which combines ideas and concepts from non-equilibrium physics and developmental biology. In this model, the stochastic occupation dynamics of cells is coupled with signaling molecules (morphogens) produced by the cells. We investigate growth patterns governed by morphogen concentration gradients, spanning regimes ranging from the diffusion-limited aggregation limit to the stochastic surface growth (Eden model) limit. Moreover, we introduce control over topology by a local operator and study growth, degrowth, and steady-state dynamics of branched patterns. The topology-preserving steady-state clusters exhibit a power-law scaling of radius of gyration with cluster size, yielding the exponents $0.68\pm0.01$ in square lattice and $0.67\pm 0.01$ in hexagonal lattice.

Explore related subjects

Keep this discovery

Explore connections, maps & timelines

BibTeXRIS

Christian Hanauer, Frank Jülicher, Efe Ilker. 2026-07-27. Control of morphology and topology in a lattice model of branching morphogenesis. https://arxiv.org/abs/2607.24619

Cite the original work for its findings. Save a collection to share your selection of sources.

KEEP EXPLORING

Related papers

The free energy of the square lattice Ising model with interactions alternating in horizontal and vertical directions

The free energy of the Ising model on the square lattice with alternating interactions in both horizontal and vertical directions is exactly derived. This model is distinct from the checkerboard Ising model. The result includes Onsager's free energy as a special case, and also includes Lee-Yang's free energy with an imaginary field, and relates these two solutions via continuous parameters. The result includes a generalization of Lee-Yang's result to cases with four different couplings. It is also derived that each imaginary magnetic field $iπ/2$ applied to a lattice site corresponds to a single frustrated square in its dual lattice.

cond-mat.stat-mech

Ideal heat engine cycles at maximal efficiency -- the ideal gas and beyond

Given a particular heat engine cycle, what is the optimal working medium that results in the highest efficiency? While one might jump to the conclusion that it must surely be the ideal gas, the situation is actually more intricate. Starting with a general Helmholtz potential that depends polynomially on molar volume and temperature we derive exact expressions for the ideal Stirling, Otto, and Brayton cycles. We find that for the thermodynamic systems described by our ansatz for the Helmholtz potential the maximal efficiency is achieved, if the working medium is described by a fundamental relation linear in temperature. This includes the ideal gas, but also classical harmonic oscillators and phenomenological models of the rubber band.

cond-mat.stat-mech

Local Detailed Balance in the Lorenz Model: Replaces the Butterfly with Frenetic Bursting

The Lorenz system is the canonical low-order model of convective instability, yet its dissipative and driving terms have never been checked against, nor constructed from, an explicit thermodynamic bookkeeping. We derive a modification that satisfies the local-detailed-balance condition for macroscopic relaxation toward nonequilibrium steady states, thereby identifying the thermodynamic force, entropy-production rate and frenesy of the resulting flow. The resulting model produces a transition from a quiescent fixed point to a robust, large-amplitude relaxation oscillation, closely analogous to recharge-discharge oscillator paradigms used for the El Nino-Southern Oscillation. The system alternates between a long, nearly reversible recharge phase and a brief, violently frenetic discharge burst, during which essentially all of the cycle's activity and entropy production is concentrated.

cond-mat.stat-mech