arXiv subjects

Amit Kumar

Publications and source records attributed to Amit Kumar.

At least 37 records · Page 2Linked to original sources

arXiv2026

Building and maintaining a System of Intracellular Compartments

Organelle patterning and its heritability remain central mysteries in cell biology, highlighting the fundamental tension between genetic inheritance and self-assembly. Here, we explore the nonequilibrium assembly and emdedded size control of the Golgi cisternae and endosomes, amid a continuous flux of membrane traffic, within a stochastic framework of mechanochemical fusion-fission cycles that violate detailed balance. Using a dynamical systems approach, we identify distinct, robust regimes, ranging from fixed points to limit cycles with definite phase relations between cisternae. We identify these dynamical regimes with diverse phenotypes, from stable cisternae to periodic, cell-cycle-dependent dissolution/reassembly of cisternae to cisternal progression. We analyse its dynamic response to systematic perturbations or driving protocols and make definite predictions that may be tested experimentally. Our analysis reveals that the two competing models of Golgi organization - vesicular transport and cisternal progression - are, in fact, two phases of the same underlying nonequilibrium process. We see that cisternal size homeostasis is brought about by a size-dependent embedded control system driven by fusion-fission kernels. Finally, our framework offers a strategy for controlling cisternal number and chemical identity by modulating the interplay between glycosylation enzymes and membrane fission-fusion dynamics.

cond-mat.soft↗

arXiv2026

Glauber quark and gluon contributions to quark energy loss at next-to-leading order and next-to-leading twist

The higher-twist formalism is used at $O(α^2_s)$ to compute all possible medium-induced single-scattering emission kernels for an incoming highly energetic and virtual quark traversing the nuclear environment. The effects of the heavy-quark mass scale are taken into account [Phys. Rev. C 94, 054902 (2016)] both in the initial state as well as in the final state, along with interactions involving both in-medium Glauber gluons and quarks [Nucl. Phys. A 793, 128 (2007)], as well as coherence effects [Phys. Rev. C 105, 024908 (2022)]. As this study is a continuation of our work on medium-induced photon production [Phys. Rev. C 112, 025204 (2025)], the general factorization procedure for $e$-$A$ deep-inelastic scattering is still used. An incoming quark energy loss in the nuclear medium yields four possible scattering kernels $K_i$ with the following final states: (i) $q+g$, (ii) $g+g$, (iii) $q+\bar{q}'$, where the quark $q$ may have a flavor different from the antiquark $\bar{q}'$, and (iv) $q+q'$, where, again, $q$ may have a flavor different from $q'$. The collisional kernels include full phase factors from all non-vanishing diagrams and complete first-order derivative in the longitudinal direction ($k^-$) as well as second-order derivative in the transverse momentum ($k_{\perp}$) gradient expansion. Furthermore, in-medium parton distribution functions and the related jet transport coefficients have a hard transverse-momentum dependence (of the emitted quark or gluon) present within the phase factor.

hep-ph↗

arXiv2026

Multifaceted Hero Developers and Bug-Fixing Outcomes Across Severity

Open-source projects often rely on a small group of highly active contributors known as hero developers. Prior work shows that hero developers are common in many OSS and enterprise projects, yet who qualifies as a hero depends heavily on the chosen contribution metric. Code-based metrics identify implementation-focused developers, whereas discussion-based metrics highlight coordination and communication; these metrics capture distinct facets of contribution. We conducted a measurement-sensitive study of multifaceted heroism across 77 Apache Software Foundation projects using three technical measures (commit count, distinct files touched, churn) and two social measures (issue-comment count, number of distinct issues commented on). We examined hero prevalence, overlap among hero sets, and severity-wise bug-fixing outcomes via fix and reopen rates. Results show that hero projects are common under all measures, but identified heroes differ substantially across facets. The pooled Jaccard overlap between technical and social hero sets is only 0.10. Cross-facet asymmetry is evident: 71.4% of technical heroes exhibit strong social activity, while only 24.2% of social heroes show strong technical activity. Fix-rate and reopen-rate differences are modest, yet hero-category rankings vary across severity levels and outcome measures. These findings indicate that heroism is not a single, metric-independent role. A multifaceted perspective offers a more reliable understanding of key contributors and better supports developer prioritisation and severity-aware bug assignment.

cs.SE↗

arXiv2026

Broadband impulsive stimulated Raman spectroscopy reveals electronic state-specific vibronic coupling and vibrational coherence transfer through nonadiabatic electronic coupling

Vibrational wavepacket dynamics in the ground (X) and excited (B) electronic states of iodine under impulsive-pump/broadband-probe excitation are revisited. A method for accurate chirp correction, necessary to determine the zero time for each component of spectrally dispersed data and thereby separate coherent vibrational dynamics from coherent artifacts and population kinetics, is introduced. While from these processed time-domain data the absolute Raman cross-section in the ground electronic state can be calculated using steady-state absorption, we show that the same can be done using the pump-probe data itself, and further extend this method as a benchmark to calculate the same for the excited electronic state; these cross-sections report on vibronic couplings specific to these states. Further, since the Fourier transform of the processed data yields information on vibrational modes averaged over the dephasing time, a wavelet analysis is performed to yield a joint time-frequency distribution of the vibrational modes, demonstrating how the time evolution of their frequencies can be extracted. The vibrational modes of the ground and excited electronic states are shown to exhibit distinct dispersion characteristics. Since overlapping spectral features appear at different time windows, such an analysis can disentangle spectral congestion, even from a simple one-dimensional measurement. Most interestingly, a rapid time-dependent spectral shift and decay of the B state mode, followed by the appearance and growth of the A-state mode, directly correlates with the pre-dissociation, followed by solvent caging-induced recombination. Thus, the present work reveals transfer of vibrational coherence from one electronic state (B) to another (A), mediated via nonadiabatic coupling to the intermediate dissociative state (a), underscoring the importance of electronic coherence.

physics.chem-ph↗

arXiv2026

Super-resolved reconstruction of single-photon emitter locations from $g^{(2)}(0)$ maps

Single-photon sources are vital for emerging quantum technologies. In particular, Nitrogen-vacancy (NV) centers in diamond are promising due to their room-temperature stability, long spin coherence, and compatibility with nanophotonic structures. A key challenge, however, is the reliable identification of isolated NV centers, since conventional confocal microscopy is diffraction-limited and cannot resolve emitter distributions within a focal spot. Besides, the associated intensity scanning is a time-expensive procedure. Here, we introduce a raster-scanned $g^{(2)}(0)$ mapping technique combined with an inversion-based reconstruction algorithm. By directly measuring local photon antibunching across the field of view, we extract the effective emitter number within each focal spot and reconstruct occupancy maps on a sub-focal-spot grid. This enables recovery of the number and spatial distribution of emitters within regions smaller than the confocal focal spot, thereby offering possibilities of going beyond the diffraction limit. Our simulations confirm robust reconstruction of NV-center distributions. The method provides a practical diagnostic tool for locating single-photon sources in an efficient and accurate manner, at much lesser time and effort compared to conventional intensity scanning. It offers valuable feedback for nanophotonic device fabrication, supporting more precise and scalable integration of NV-based quantum photonic technologies.

quant-ph↗

arXiv2026

Efficient imaging of quantum emitters using compressive sensing

Optical imaging of quantum emitters is essential for a wide range of quantum applications. Conventional confocal imaging relies on point-by-point raster scanning, which is inherently time-consuming and photon-inefficient, particularly for sparse emitter distributions and photon-limited samples. Here, we demonstrate a compressive sensing-based imaging approach, where spatially structured wide-field excitation replaces raster scanning, enabling reconstruction of sparse emitters. In our implementation, random binary patterns are used to acquire compressive measurements, from which the spatial fluorescence distribution is reconstructed using a GPSR-BB algorithm. We experimentally demonstrate this approach using nitrogen-vacancy (NV) centers in diamond as a representative platform, with high-fidelity image reconstruction achieved using only approximately $20\%$ of the measurements required for conventional raster scanning. In addition to intensity reconstruction, we extend this framework to reconstruct spatial maps of the second-order correlation function $g^{(2)}(0)$ from compressive measurements. This enables identification of single-photon emitters through antibunching signatures using significantly reduced data.

physics.optics↗

arXiv2026

Leveraging Commit Size Context and Hyper Co-Change Graph Centralities for Defect Prediction

File-level defect prediction models traditionally rely on product and process metrics. While process metrics effectively complement product metrics, they often overlook commit size the number of files changed per commit despite its strong association with software quality. Network centrality measures on dependency graphs have also proven to be valuable product level indicators. Motivated by this, we first redefine process metrics as commit size aware process metric vectors, transforming conventional scalar measures into 100 dimensional profiles that capture the distribution of changes across commit size strata. We then model change history as a hyper co change graph, where hyperedges naturally encode commit-size semantics. Vector centralities computed on these hypergraphs quantify size-aware node importance for source files. Experiments on nine long-lived Apache projects using five popular classifiers show that replacing scalar process metrics with the proposed commit size aware vectors, alongside product metrics, consistently improves predictive performance. These findings establish that commit size aware process metrics and hypergraph based vector centralities capture higher-order change semantics, leading to more discriminative, better calibrated, and statistically superior defect prediction models.

cs.SE↗

arXiv2026

Thermodynamics, Shadow, and Quasinormal Modes of AdS Ayón--Beato--García Massive Black Hole

We investigate the thermodynamics, photon sphere, and dynamical stability of an AdS Ayón--Beato--García (ABG) massive black hole with graviton mass and magnetic charge. The Gibbs free energy exhibits distinct limiting behaviors: it reduces to that of an AdS massive black hole when magnetic charge vanishes, to that of an AdS ABG black hole when graviton mass is zero, and smoothly interpolates to the AdS massive Reissner-Nordström case in the asymptotic regime. Furthermore, the photon sphere and shadow analysis indicate that increasing the graviton mass expands their radii, while increasing the magnetic charge causes contraction, in agreement with earlier studies of black hole spacetimes. Quasinormal mode (QNM) calculations further confirm dynamical stability, as the imaginary part remains negative, ensuring decay of perturbations. Additionally, the real part of the frequency decreases with graviton mass, while the imaginary part initially grows before saturating at higher values. Together, these results provide meaningful insights into the interplay between graviton mass, magnetic charge, and stability, thereby enriching the understanding of black holes in modified gravity theories.

gr-qc↗

arXiv2026

Learning-Augmented Algorithms for $k$-median via Online Learning

The field of learning-augmented algorithms seeks to use ML techniques on past instances of a problem to inform an algorithm designed for a future instance. In this paper, we introduce a novel model for learning-augmented algorithms inspired by online learning. In this model, we are given a sequence of instances of a problem and the goal of the learning-augmented algorithm is to use prior instances to propose a solution to a future instance of the problem. The performance of the algorithm is measured by its average performance across all the instances, where the performance on a single instance is the ratio between the cost of the algorithm's solution and that of an optimal solution for that instance. We apply this framework to the classic $k$-median clustering problem, and give an efficient learning algorithm that can approximately match the average performance of the best fixed $k$-median solution in hindsight across all the instances. We also experimentally evaluate our algorithm and show that its empirical performance is close to optimal, and also that it automatically adapts the solution to a dynamically changing sequence.

cs.DS↗

arXiv2026

Quantifying quasiparticle chirality in a chiral topological semimetal

Recently, the projection of the electron's spin on its crystal momentum has been proposed as a metric to quantify electronic chirality of Bloch states in crystals, which is expected to affect a wide range of physical properties, such as magnetoelectric and optical responses. However, a direct experimental quantification of this chirality metric over an entire iso-energy surface has remained elusive. Here, we have used spin- and angle-resolved photoemission spectroscopy to directly probe the electronic chirality by measuring the bulk spin texture of Kramers-Weyl and Weyl cones in RhSi, a chiral topological semimetal with strong spin-orbit coupling (SOC). After quantifying the SOC splitting of Weyl cones, we determine their spin direction along different azimuthal angles to extract energy dependent the deviations (up to ~40°) from perfect parallel spin-momentum locking. From these deviations we define an energy-dependent normalized electron chirality density (NECD), a directly accessible metric of bulk electronic chirality. In RhSi, the NECD decreases from 1 at the Kramers-Weyl point to ~0.8 at ~200 meV below it. Finally, we show that this experimentally grounded NECD provides predictive power for magneto-optical and transport responses of chiral materials, exemplified by the longitudinal Edelstein effect.

cond-mat.mes-hall↗

arXiv2026

Fluctuation-Dissipation Relation for Hard Partons in a Gluonic Plasma

We derive a fluctuation dissipation relation connecting the drag and diffusion jet transport coefficients for an energetic light quark traversing a non-perturbative thermalized gluon plasma. The hard quark is taken to be close to on-shell, with an energy scale parametrically larger than the medium temperature. We introduce a general complex-valued function for each transport coefficient. Evaluating these in the deep Euclidean momentum region enables their expression in terms of local operators. Using contour-integration techniques, we relate these local operators, after vacuum subtraction, to the physical transport coefficients that arise along a branch cut, close to light-like dispersion. The derived relation relates the longitudinal drag coefficient to the longitudinal and transverse diffusion coefficients, and the thermal gluon condensate.

hep-ph↗

arXiv2026

Suppression of Spectral Gap and Flat Bands on a Cuprate Superconductor Side-Surface

Side surfaces of cuprate superconductors are expected to display a suppressed $d$-wave order parameter and zero-energy topological flat bands with a large density of states, making them susceptible to symmetry broken orders. Yet such surfaces have never been investigated with momentum-resolved, surface-sensitive probes, because high-temperature superconductors rarely cleave along them. Using focused-ion-beam milling to define a controlled breaking point, we expose pristine (110) side surfaces of overdoped La$_{2-x}$Sr$_x$CuO$_4$ ($x=0.22$) suitable for angle-resolved photoemission. We observe the suppression of the superconducting spectral gap within our energy resolution ($\sim 4~\mathrm{meV}$), and surprisingly, the expected zero-energy flat band peak is also suppressed, despite the high topographic quality of the surface. Self-consistent Bogoliubov--de~Gennes calculations show that the measured geometric roughness of the cleaved surface is too weak to eliminate these modes. The calculations further demonstrate that bulk inhomogeneities characteristic of high-temperature superconductors, modelled as moderate Anderson-type disorder, can broaden the flat-band states beyond detectability. Our results provide the first momentum-resolved view of the electronic structure on a cuprate side surface and reveal disorder as the key factor currently preventing appearance of flat bands and their associated correlated orders.

cond-mat.supr-con↗

arXiv2026

Time-Domain Photometry and Activity Evolution of Interstellar Comet 3I/ATLAS with BHTOM

Time-domain photometric monitoring is essential for characterizing cometary evolution, particularly for rare interstellar objects with limited observing opportunities. We aimed to characterize the pre-perihelion photometric behavior and dust activity of the interstellar comet 3I/ATLAS, and to test the capability of the Black Hole Target and Observation Manager (BHTOM) platform and telescope network for coordinated high-cadence non-sidereal observations. We obtained 70 days of time-series photometry of 3I/ATLAS from 2025 July 4 - September 11 using 16 telescopes and 1554 images. The data were processed and calibrated with the BHTOM pipeline. High-cadence, multi-band imaging was used to measure the rotation period and color evolution, while the dust activity was quantified via Afp measurements. We present a pre-perihelion light curve of 3I/ATLAS from Rh = 3.18 - 2.19 au, which exhibited a steady increase of ~3 magnitudes with no evidence of anomalous behavior. We measured a rotation period of P_rot = 15.98 +/- 0.08 h. The relative dust production increased from A(0)fp ~600 - 1100 cm, and the upper limit on the dust mass-loss rate increased from \leq 217 kg/s to \leq 328 kg/s. We measured an activity index of n = -1.24 +/- 0.02, consistent with a well-developed dust coma. The colors were statistically non-changing, with only a weak, non-significant tendency for 3I/ATLAS to become bluer at 3.5 > Rh > 2.2 au.

astro-ph.EP↗

arXiv2026

Low-Field Ferroelectric Switching realised by Forced Harmonic Oscillation of Domain Walls

Conventionally, dc fields are used for switching dipole orientations in ferroelectrics. Such fields tilt the potential surface experienced by domain walls and thereby lower activation energies for their movement: escape from tilted potential wells is then realised by thermal excitation, allowing a "creep" process of pinning and depinning to develop. Borrowing ideas of domain wall resonance from the magnetic racetrack community, we show that ac fields, applied at the right frequency, can cause switching at much lower field magnitudes than dc ones (by factors of 4-5). Ferroelectric wall motion appears to be overdamped in the system studied (relaxor strontium barium niobate) and so the maximum in switching efficacy observed, at ~100 kHz, cannot be associated with resonant amplification, which needs an underdamped environment. Instead, in this high viscosity system, the frequency at which the maximum switching efficacy occurs seems to represent a compromise between the attempt frequency for wall depinning (which increases with frequency) and the extent to which energy is transferred to the wall within each field cycle (which decreases with frequency). Notwithstanding the absence of true resonance, the observation that ac excitation can dramatically reduce the bias levels needed for ferroelectric switching could still have significant ramifications for low energy memory technology.

cond-mat.mtrl-sci↗

arXiv2026

Inference-Time Rethinking with Latent Thought Vectors for Math Reasoning

Standard chain-of-thought reasoning generates a solution in a single forward pass, committing irrevocably to each token and lacking a mechanism to recover from early errors. We introduce Inference-Time Rethinking, a generative framework that enables iterative self-correction by decoupling declarative latent thought vectors from procedural generation. We factorize reasoning into a continuous latent thought vector (what to reason about) and a decoder that verbalizes the trace conditioned on this vector (how to reason). Beyond serving as a declarative buffer, latent thought vectors compress the reasoning structure into a continuous representation that abstracts away surface-level token variability, making gradient-based optimization over reasoning strategies well-posed. Our prior model maps unstructured noise to a learned manifold of valid reasoning patterns, and at test time we employ a Gibbs-style procedure that alternates between generating a candidate trace and optimizing the latent vector to better explain that trace, effectively navigating the latent manifold to refine the reasoning strategy. Training a 0.2B-parameter model from scratch on GSM8K, our method with 30 rethinking iterations surpasses baselines with 10 to 15 times more parameters, including a 3B counterpart. This result demonstrates that effective mathematical reasoning can emerge from sophisticated inference-time computation rather than solely from massive parameter counts.

cs.CL↗

arXiv2026

Role of lattice structure and breaking of antiferromagnetic spin order in enhancement of ferromagnetic, electronic, and magneto-electric properties in Fe$_{2-x}$Sc$_x$O$_3$ system

The strategy of breaking antiferromagnetic (AFM) ground state in alpha-Fe2O3 by doping non-magnetic Sc3+ ions at the Fe3+ sites has been used in Fe2-xScxO3 system (x = 0.2-1.0). The material has been stabilized in single-phase (rhombohedral alpha-Fe2O3) or mix-phase (rhombohedral alpha-Fe2O3 and cubic Sc2O3-types) structure by varying Sc content and heat treatment temperature. Neutron diffraction confirmed perturbed AFM ground state down to low temperature with magnetic moment 2.75-4.68 muB per Fe site and Morin transition 260 K. DC magnetic measurement showed magnetic coercivity 0.2 to 6 kOe. The material showed transformation from insulating state (conductivity 10-14-10-10 S per cm and polarization 0.5-2 micro-C per cm2) to high conductive state (conductivity 10-10 -10-7 S per cm and polarization greater than 2 micro-C per cm2) above the Morin transition. The room temperature measurements showed maximum current density 35-186 micro-A per cm2, electric polarization 2.7-15.6 micro-C per cm2, magneto-electric voltage up to 5 mV with coupling constant 0.62-10.11 mV per Oe.cm and magneto-conductance up to 90 %. The results will open the door for suitably modifying the lattice-structure, magnetic spin order, and charge-spin coupling in hematite based material and their application in low power spintronic devices.

cond-mat.mtrl-sci↗

arXiv2026

Clustering Dynamics of SiO2-Pt Active Janus Colloids

Active colloid clustering is central to understanding non-equilibrium self-organization, with implications for programmable active materials and synthetic or biological assemblies. While most prior studies have focused on dimers or small aggregates, the dynamics of larger clusters remain relatively unexplored. Here, we experimentally investigate chemically active, monodisperse SiO2-Pt Janus colloid (JC) clusters as large as n=9 in a dynamic clustering regime, where clusters continuously form, dissolve, and merge as swimmer density increases. We show that clusters move in circular trajectories, and that both their translational and rotational dynamics can be predicted directly from the orientations of constituent JCs. Furthermore, we identify that their formation undergoes a mechanistic transition: while small clusters are mediated by chemical interactions, larger clusters are predominantly formed by steric effects. This transition arises from a mismatch of motilities between incoming JCs and clusters, combined with increased Pt-surface exposure. Our results extend prior dimer-focused studies to larger aggregates and establish a predictive description that bridges individual swimmer behavior with collective dynamics.

cond-mat.soft↗

arXiv2025

SN 2024aecx: a fast-evolving Type IIb supernova with a prominent shock-cooling peak

SN 2024aecx is a nearby ($\sim$11 Mpc) Type IIb SN discovered within $\sim$1 d after explosion. In this paper we report high-cadence photometric (typically 0.5$\sim$1 day) and spectroscopic follow-up observations, conducted from as early as 0.27 d post discovery out to the nebular phase at 158.4 d. We analyze the environment of SN 2024aecx and derive a new distance (11.3$\pm$1.1 Mpc), metallicity and host extinction. The light curve exhibits a hot and luminous shock-cooling peak at the first few days, followed by a main peak with very rapid post-maximum decline. The earliest spectra are blue and featureless, while from 2.3 d after discovery prominent P-Cygni profiles emerge. At nebular phase, the emission lines exhibit asymmetric and double-peaked profiles, indicating asphericity and/or early dust formation in the ejecta. Nebular spectral modelling indicates a blueshifted O-rich clump moving toward observer, and the $[\text{OI}]/[\text{CaII}]$ line ratio suggests an intermediate-mass progenitor. We simulated the progenitor and explosion using a two-component model of shock cooling and radioactive $^{56}$Ni heating; our model favors an extended, low-mass H-rich envelope with $M_{\mathrm{e}} = 0.04\pm{0.01} M_{\odot}$ and a low ejecta mass of$M_{\mathrm{ej}} = 1.55^{+0.18}_{-0.14} M_{\odot}$. And the nebular-phase spectra and light-curve modelling both suggest that it most likely originated from an intermediate-mass binary progenitor system. The comprehensive monitoring of SN 2024aecx, coupled with the detailed characterization of its local environment, establishes it as a benchmark event for probing the progenitors and explosion mechanisms of Type IIb SNe.

astro-ph.SR↗