arXiv subjects

Chuan Shi

Publications and source records attributed to Chuan Shi.

At least 109 records · Page 6Linked to original sources

arXiv2022

MA-GCL: Model Augmentation Tricks for Graph Contrastive Learning

Contrastive learning (CL), which can extract the information shared between different contrastive views, has become a popular paradigm for vision representation learning. Inspired by the success in computer vision, recent work introduces CL into graph modeling, dubbed as graph contrastive learning (GCL). However, generating contrastive views in graphs is more challenging than that in images, since we have little prior knowledge on how to significantly augment a graph without changing its labels. We argue that typical data augmentation techniques (e.g., edge dropping) in GCL cannot generate diverse enough contrastive views to filter out noises. Moreover, previous GCL methods employ two view encoders with exactly the same neural architecture and tied parameters, which further harms the diversity of augmented views. To address this limitation, we propose a novel paradigm named model augmented GCL (MA-GCL), which will focus on manipulating the architectures of view encoders instead of perturbing graph inputs. Specifically, we present three easy-to-implement model augmentation tricks for GCL, namely asymmetric, random and shuffling, which can respectively help alleviate high- frequency noises, enrich training instances and bring safer augmentations. All three tricks are compatible with typical data augmentations. Experimental results show that MA-GCL can achieve state-of-the-art performance on node classification benchmarks by applying the three tricks on a simple base model. Extensive studies also validate our motivation and the effectiveness of each trick. (Code, data and appendix are available at https://github.com/GXM1141/MA-GCL. )

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arXiv2022

Uncovering the Structural Fairness in Graph Contrastive Learning

Recent studies show that graph convolutional network (GCN) often performs worse for low-degree nodes, exhibiting the so-called structural unfairness for graphs with long-tailed degree distributions prevalent in the real world. Graph contrastive learning (GCL), which marries the power of GCN and contrastive learning, has emerged as a promising self-supervised approach for learning node representations. How does GCL behave in terms of structural fairness? Surprisingly, we find that representations obtained by GCL methods are already fairer to degree bias than those learned by GCN. We theoretically show that this fairness stems from intra-community concentration and inter-community scatter properties of GCL, resulting in a much clear community structure to drive low-degree nodes away from the community boundary. Based on our theoretical analysis, we further devise a novel graph augmentation method, called GRAph contrastive learning for DEgree bias (GRADE), which applies different strategies to low- and high-degree nodes. Extensive experiments on various benchmarks and evaluation protocols validate the effectiveness of the proposed method.

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arXiv2022

Revisiting Graph Contrastive Learning from the Perspective of Graph Spectrum

Graph Contrastive Learning (GCL), learning the node representations by augmenting graphs, has attracted considerable attentions. Despite the proliferation of various graph augmentation strategies, some fundamental questions still remain unclear: what information is essentially encoded into the learned representations by GCL? Are there some general graph augmentation rules behind different augmentations? If so, what are they and what insights can they bring? In this paper, we answer these questions by establishing the connection between GCL and graph spectrum. By an experimental investigation in spectral domain, we firstly find the General grAph augMEntation (GAME) rule for GCL, i.e., the difference of the high-frequency parts between two augmented graphs should be larger than that of low-frequency parts. This rule reveals the fundamental principle to revisit the current graph augmentations and design new effective graph augmentations. Then we theoretically prove that GCL is able to learn the invariance information by contrastive invariance theorem, together with our GAME rule, for the first time, we uncover that the learned representations by GCL essentially encode the low-frequency information, which explains why GCL works. Guided by this rule, we propose a spectral graph contrastive learning module (SpCo), which is a general and GCL-friendly plug-in. We combine it with different existing GCL models, and extensive experiments well demonstrate that it can further improve the performances of a wide variety of different GCL methods.

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arXiv2022

Debiasing Graph Neural Networks via Learning Disentangled Causal Substructure

Most Graph Neural Networks (GNNs) predict the labels of unseen graphs by learning the correlation between the input graphs and labels. However, by presenting a graph classification investigation on the training graphs with severe bias, surprisingly, we discover that GNNs always tend to explore the spurious correlations to make decision, even if the causal correlation always exists. This implies that existing GNNs trained on such biased datasets will suffer from poor generalization capability. By analyzing this problem in a causal view, we find that disentangling and decorrelating the causal and bias latent variables from the biased graphs are both crucial for debiasing. Inspiring by this, we propose a general disentangled GNN framework to learn the causal substructure and bias substructure, respectively. Particularly, we design a parameterized edge mask generator to explicitly split the input graph into causal and bias subgraphs. Then two GNN modules supervised by causal/bias-aware loss functions respectively are trained to encode causal and bias subgraphs into their corresponding representations. With the disentangled representations, we synthesize the counterfactual unbiased training samples to further decorrelate causal and bias variables. Moreover, to better benchmark the severe bias problem, we construct three new graph datasets, which have controllable bias degrees and are easier to visualize and explain. Experimental results well demonstrate that our approach achieves superior generalization performance over existing baselines. Furthermore, owing to the learned edge mask, the proposed model has appealing interpretability and transferability. Code and data are available at: https://github.com/googlebaba/DisC.

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arXiv2022

Data-Free Adversarial Knowledge Distillation for Graph Neural Networks

Graph neural networks (GNNs) have been widely used in modeling graph structured data, owing to its impressive performance in a wide range of practical applications. Recently, knowledge distillation (KD) for GNNs has enabled remarkable progress in graph model compression and knowledge transfer. However, most of the existing KD methods require a large volume of real data, which are not readily available in practice, and may preclude their applicability in scenarios where the teacher model is trained on rare or hard to acquire datasets. To address this problem, we propose the first end-to-end framework for data-free adversarial knowledge distillation on graph structured data (DFAD-GNN). To be specific, our DFAD-GNN employs a generative adversarial network, which mainly consists of three components: a pre-trained teacher model and a student model are regarded as two discriminators, and a generator is utilized for deriving training graphs to distill knowledge from the teacher model into the student model. Extensive experiments on various benchmark models and six representative datasets demonstrate that our DFAD-GNN significantly surpasses state-of-the-art data-free baselines in the graph classification task.

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arXiv2022

KGNN: Distributed Framework for Graph Neural Knowledge Representation

Knowledge representation learning has been commonly adopted to incorporate knowledge graph (KG) into various online services. Although existing knowledge representation learning methods have achieved considerable performance improvement, they ignore high-order structure and abundant attribute information, resulting unsatisfactory performance on semantics-rich KGs. Moreover, they fail to make prediction in an inductive manner and cannot scale to large industrial graphs. To address these issues, we develop a novel framework called KGNN to take full advantage of knowledge data for representation learning in the distributed learning system. KGNN is equipped with GNN based encoder and knowledge aware decoder, which aim to jointly explore high-order structure and attribute information together in a fine-grained fashion and preserve the relation patterns in KGs, respectively. Extensive experiments on three datasets for link prediction and triplet classification task demonstrate the effectiveness and scalability of KGNN framework.

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arXiv2022

Space4HGNN: A Novel, Modularized and Reproducible Platform to Evaluate Heterogeneous Graph Neural Network

Heterogeneous Graph Neural Network (HGNN) has been successfully employed in various tasks, but we cannot accurately know the importance of different design dimensions of HGNNs due to diverse architectures and applied scenarios. Besides, in the research community of HGNNs, implementing and evaluating various tasks still need much human effort. To mitigate these issues, we first propose a unified framework covering most HGNNs, consisting of three components: heterogeneous linear transformation, heterogeneous graph transformation, and heterogeneous message passing layer. Then we build a platform Space4HGNN by defining a design space for HGNNs based on the unified framework, which offers modularized components, reproducible implementations, and standardized evaluation for HGNNs. Finally, we conduct experiments to analyze the effect of different designs. With the insights found, we distill a condensed design space and verify its effectiveness.

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arXiv2022

An Effective Graph Learning based Approach for Temporal Link Prediction: The First Place of WSDM Cup 2022

Temporal link prediction, as one of the most crucial work in temporal graphs, has attracted lots of attention from the research area. The WSDM Cup 2022 seeks for solutions that predict the existence probabilities of edges within time spans over temporal graph. This paper introduces the solution of AntGraph, which wins the 1st place in the competition. We first analysis the theoretical upper-bound of the performance by removing temporal information, which implies that only structure and attribute information on the graph could achieve great performance. Based on this hypothesis, then we introduce several well-designed features. Finally, experiments conducted on the competition datasets show the superiority of our proposal, which achieved AUC score of 0.666 on dataset A and 0.902 on dataset B, the ablation studies also prove the efficiency of each feature. Code is publicly available at https://github.com/im0qianqian/WSDM2022TGP-AntGraph.

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arXiv2022

Confidence May Cheat: Self-Training on Graph Neural Networks under Distribution Shift

Graph Convolutional Networks (GCNs) have recently attracted vast interest and achieved state-of-the-art performance on graphs, but its success could typically hinge on careful training with amounts of expensive and time-consuming labeled data. To alleviate labeled data scarcity, self-training methods have been widely adopted on graphs by labeling high-confidence unlabeled nodes and then adding them to the training step. In this line, we empirically make a thorough study for current self-training methods on graphs. Surprisingly, we find that high-confidence unlabeled nodes are not always useful, and even introduce the distribution shift issue between the original labeled dataset and the augmented dataset by self-training, severely hindering the capability of self-training on graphs. To this end, in this paper, we propose a novel Distribution Recovered Graph Self-Training framework (DR-GST), which could recover the distribution of the original labeled dataset. Specifically, we first prove the equality of loss function in self-training framework under the distribution shift case and the population distribution if each pseudo-labeled node is weighted by a proper coefficient. Considering the intractability of the coefficient, we then propose to replace the coefficient with the information gain after observing the same changing trend between them, where information gain is respectively estimated via both dropout variational inference and dropedge variational inference in DR-GST. However, such a weighted loss function will enlarge the impact of incorrect pseudo labels. As a result, we apply the loss correction method to improve the quality of pseudo labels. Both our theoretical analysis and extensive experiments on five benchmark datasets demonstrate the effectiveness of the proposed DR-GST, as well as each well-designed component in DR-GST.

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arXiv2022

Debiased Graph Neural Networks with Agnostic Label Selection Bias

Most existing Graph Neural Networks (GNNs) are proposed without considering the selection bias in data, i.e., the inconsistent distribution between the training set with test set. In reality, the test data is not even available during the training process, making selection bias agnostic. Training GNNs with biased selected nodes leads to significant parameter estimation bias and greatly impacts the generalization ability on test nodes. In this paper, we first present an experimental investigation, which clearly shows that the selection bias drastically hinders the generalization ability of GNNs, and theoretically prove that the selection bias will cause the biased estimation on GNN parameters. Then to remove the bias in GNN estimation, we propose a novel Debiased Graph Neural Networks (DGNN) with a differentiated decorrelation regularizer. The differentiated decorrelation regularizer estimates a sample weight for each labeled node such that the spurious correlation of learned embeddings could be eliminated. We analyze the regularizer in causal view and it motivates us to differentiate the weights of the variables based on their contribution on the confounding bias. Then, these sample weights are used for reweighting GNNs to eliminate the estimation bias, thus help to improve the stability of prediction on unknown test nodes. Comprehensive experiments are conducted on several challenging graph datasets with two kinds of label selection biases. The results well verify that our proposed model outperforms the state-of-the-art methods and DGNN is a flexible framework to enhance existing GNNs.

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arXiv2022

Compact Graph Structure Learning via Mutual Information Compression

Graph Structure Learning (GSL) recently has attracted considerable attentions in its capacity of optimizing graph structure as well as learning suitable parameters of Graph Neural Networks (GNNs) simultaneously. Current GSL methods mainly learn an optimal graph structure (final view) from single or multiple information sources (basic views), however the theoretical guidance on what is the optimal graph structure is still unexplored. In essence, an optimal graph structure should only contain the information about tasks while compress redundant noise as much as possible, which is defined as "minimal sufficient structure", so as to maintain the accurancy and robustness. How to obtain such structure in a principled way? In this paper, we theoretically prove that if we optimize basic views and final view based on mutual information, and keep their performance on labels simultaneously, the final view will be a minimal sufficient structure. With this guidance, we propose a Compact GSL architecture by MI compression, named CoGSL. Specifically, two basic views are extracted from original graph as two inputs of the model, which are refinedly reestimated by a view estimator. Then, we propose an adaptive technique to fuse estimated views into the final view. Furthermore, we maintain the performance of estimated views and the final view and reduce the mutual information of every two views. To comprehensively evaluate the performance of CoGSL, we conduct extensive experiments on several datasets under clean and attacked conditions, which demonstrate the effectiveness and robustness of CoGSL.

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arXiv2022

Be Confident! Towards Trustworthy Graph Neural Networks via Confidence Calibration

Despite Graph Neural Networks (GNNs) have achieved remarkable accuracy, whether the results are trustworthy is still unexplored. Previous studies suggest that many modern neural networks are over-confident on the predictions, however, surprisingly, we discover that GNNs are primarily in the opposite direction, i.e., GNNs are under-confident. Therefore, the confidence calibration for GNNs is highly desired. In this paper, we propose a novel trustworthy GNN model by designing a topology-aware post-hoc calibration function. Specifically, we first verify that the confidence distribution in a graph has homophily property, and this finding inspires us to design a calibration GNN model (CaGCN) to learn the calibration function. CaGCN is able to obtain a unique transformation from logits of GNNs to the calibrated confidence for each node, meanwhile, such transformation is able to preserve the order between classes, satisfying the accuracy-preserving property. Moreover, we apply the calibration GNN to self-training framework, showing that more trustworthy pseudo labels can be obtained with the calibrated confidence and further improve the performance. Extensive experiments demonstrate the effectiveness of our proposed model in terms of both calibration and accuracy.

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arXiv2021

Quantum parameter estimation in a dissipative environment

We investigate the performance of quantum parameter estimation based on a qubit probe in a dissipative bosonic environment beyond the traditional paradigm of weak-coupling and rotating-wave approximations. By making use of an exactly numerical hierarchical equations of motion method, we analyze the influences of the non-Markovian memory effect induced by the environment and the form of probe-environment interaction on the estimation precision. It is found that (i) the non-Markovianity can effectively boost the estimation performance and (ii) the estimation precision can be improved by introducing a perpendicular probe-environment interaction. Our results indicate the scheme of parameter estimation in a noisy environment can be optimized via engineering the decoherence mechanism.

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arXiv2021

Criticality-enhanced quantum sensor at finite temperature

Conventional criticality-based quantum metrological schemes work only at zero or very low temperature because the quantum uncertainty around the quantum phase-transition point is generally erased by thermal fluctuations with the increase of temperature. Such an ultralow-temperature requirement severely restricts the development of quantum critical metrology. In this paper, we propose a thermodynamic-criticality-enhanced quantum sensing scenario at finite temperature. In our scheme, a qubit is employed as a quantum sensor to estimate parameters of interest in the Dicke model which experiences a thermodynamic phase transition. It is revealed that the thermodynamic criticality of the Dicke model can significantly improve the sensing precision. Enriching the scope of quantum critical metrology, our finding provides a possibility to realize highly sensitive quantum sensing without cooling.

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arXiv2021

Self-supervised Heterogeneous Graph Neural Network with Co-contrastive Learning

Heterogeneous graph neural networks (HGNNs) as an emerging technique have shown superior capacity of dealing with heterogeneous information network (HIN). However, most HGNNs follow a semi-supervised learning manner, which notably limits their wide use in reality since labels are usually scarce in real applications. Recently, contrastive learning, a self-supervised method, becomes one of the most exciting learning paradigms and shows great potential when there are no labels. In this paper, we study the problem of self-supervised HGNNs and propose a novel co-contrastive learning mechanism for HGNNs, named HeCo. Different from traditional contrastive learning which only focuses on contrasting positive and negative samples, HeCo employs cross-viewcontrastive mechanism. Specifically, two views of a HIN (network schema and meta-path views) are proposed to learn node embeddings, so as to capture both of local and high-order structures simultaneously. Then the cross-view contrastive learning, as well as a view mask mechanism, is proposed, which is able to extract the positive and negative embeddings from two views. This enables the two views to collaboratively supervise each other and finally learn high-level node embeddings. Moreover, two extensions of HeCo are designed to generate harder negative samples with high quality, which further boosts the performance of HeCo. Extensive experiments conducted on a variety of real-world networks show the superior performance of the proposed methods over the state-of-the-arts.

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arXiv2021

Lorentzian Graph Convolutional Networks

Graph convolutional networks (GCNs) have received considerable research attention recently. Most GCNs learn the node representations in Euclidean geometry, but that could have a high distortion in the case of embedding graphs with scale-free or hierarchical structure. Recently, some GCNs are proposed to deal with this problem in non-Euclidean geometry, e.g., hyperbolic geometry. Although hyperbolic GCNs achieve promising performance, existing hyperbolic graph operations actually cannot rigorously follow the hyperbolic geometry, which may limit the ability of hyperbolic geometry and thus hurt the performance of hyperbolic GCNs. In this paper, we propose a novel hyperbolic GCN named Lorentzian graph convolutional network (LGCN), which rigorously guarantees the learned node features follow the hyperbolic geometry. Specifically, we rebuild the graph operations of hyperbolic GCNs with Lorentzian version, e.g., the feature transformation and non-linear activation. Also, an elegant neighborhood aggregation method is designed based on the centroid of Lorentzian distance. Moreover, we prove some proposed graph operations are equivalent in different types of hyperbolic geometry, which fundamentally indicates their correctness. Experiments on six datasets show that LGCN performs better than the state-of-the-art methods. LGCN has lower distortion to learn the representation of tree-likeness graphs compared with existing hyperbolic GCNs. We also find that the performance of some hyperbolic GCNs can be improved by simply replacing the graph operations with those we defined in this paper.

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arXiv2021

Extract the Knowledge of Graph Neural Networks and Go Beyond it: An Effective Knowledge Distillation Framework

Semi-supervised learning on graphs is an important problem in the machine learning area. In recent years, state-of-the-art classification methods based on graph neural networks (GNNs) have shown their superiority over traditional ones such as label propagation. However, the sophisticated architectures of these neural models will lead to a complex prediction mechanism, which could not make full use of valuable prior knowledge lying in the data, e.g., structurally correlated nodes tend to have the same class. In this paper, we propose a framework based on knowledge distillation to address the above issues. Our framework extracts the knowledge of an arbitrary learned GNN model (teacher model), and injects it into a well-designed student model. The student model is built with two simple prediction mechanisms, i.e., label propagation and feature transformation, which naturally preserves structure-based and feature-based prior knowledge, respectively. In specific, we design the student model as a trainable combination of parameterized label propagation and feature transformation modules. As a result, the learned student can benefit from both prior knowledge and the knowledge in GNN teachers for more effective predictions. Moreover, the learned student model has a more interpretable prediction process than GNNs. We conduct experiments on five public benchmark datasets and employ seven GNN models including GCN, GAT, APPNP, SAGE, SGC, GCNII and GLP as the teacher models. Experimental results show that the learned student model can consistently outperform its corresponding teacher model by 1.4% - 4.7% on average. Code and data are available at https://github.com/BUPT-GAMMA/CPF

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arXiv2021

Interpreting and Unifying Graph Neural Networks with An Optimization Framework

Graph Neural Networks (GNNs) have received considerable attention on graph-structured data learning for a wide variety of tasks. The well-designed propagation mechanism which has been demonstrated effective is the most fundamental part of GNNs. Although most of GNNs basically follow a message passing manner, litter effort has been made to discover and analyze their essential relations. In this paper, we establish a surprising connection between different propagation mechanisms with a unified optimization problem, showing that despite the proliferation of various GNNs, in fact, their proposed propagation mechanisms are the optimal solution optimizing a feature fitting function over a wide class of graph kernels with a graph regularization term. Our proposed unified optimization framework, summarizing the commonalities between several of the most representative GNNs, not only provides a macroscopic view on surveying the relations between different GNNs, but also further opens up new opportunities for flexibly designing new GNNs. With the proposed framework, we discover that existing works usually utilize naive graph convolutional kernels for feature fitting function, and we further develop two novel objective functions considering adjustable graph kernels showing low-pass or high-pass filtering capabilities respectively. Moreover, we provide the convergence proofs and expressive power comparisons for the proposed models. Extensive experiments on benchmark datasets clearly show that the proposed GNNs not only outperform the state-of-the-art methods but also have good ability to alleviate over-smoothing, and further verify the feasibility for designing GNNs with our unified optimization framework.

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