Dariusz Jarosz | Search arXiv

arXiv2026

Strategies for Deploying AI Agents in Production at Scientific User Facilities

Agentic artificial intelligence (AI) is moving beyond research demonstrations toward production use at scientific user facilities, including light sources, neutron sources, nanoscience centers, and autonomous laboratories. Its scientific value extends beyond increasing throughput. Agents can perform repeatable tasks in calibration, measurement execution, and quality control, as well as initial analyses that turn data into reviewable evidence, allowing scientists to focus on hypotheses, unexpected observations, and interpretation. Drawing on deployments of LLM-driven agents at the APS, this perspective distills practical strategies with an emphasis on elements that can be reused across instruments and facilities. We discuss agent harnesses for beamline control, facility knowledge retrieval, and data analysis while keeping the underlying design principles independent of any specific implementation. These principles cover inference endpoints, tool-server architectures, non-text data, computationally intensive services, reusable skills, and governed learning throughout an instrument's lifecycle. We also consider how network and Linux operations, governed shared memory, and deterministic orchestration can extend these patterns across facility services. Because LLM capabilities continue to evolve, these recommendations represent a snapshot of the technology as of the date on the cover.

cs.SE↗

arXiv2026

A corrective agentic hybrid RAG and an operations-grounded evaluation for a scientific facility

Scientific user facilities accumulate decades of operational knowledge that no single search index covers: electronic logbooks, technical documents, internal wikis, operations chat messages, maintenance records, and live control-system data. We present APS-RAG, Advanced Photon Source Retrieval Augmented Generation, a deployed platform that makes the institutional knowledge at the Advanced Photon Source (APS) accessible to staff through natural-language queries, along with an operations-grounded evaluation. The retrieval engine fuses dense, sparse, and knowledge-graph (KG) channels with query-type-adaptive reciprocal-rank fusion, adds a corrective agentic loop, and runs a native-tool ReAct executor over a Model Context Protocol (MCP) tooling layer. We construct APS-Bench, a 50-question, question-answering (QA) dataset with auditable gold answers. Every retrieval-augmented variant numerically improves strict vital-nugget recall over a naive BM25 baseline (63.8%), with the full corrective Agentic GraphRAG scoring (70.3%). The cross-encoder reranker contributes significantly to answer quality: removing it and allowing the LLM to score relevance drastically reduces strict vital recall by 32.8%. The graph channel and corrective loop contribute positively as expected, but the performance gains are marginal. Additionally, we also compare the performance of open-source and closed-source LLMs in final answer synthesis. We release the APS-Bench construction methodology, the six-layer evaluation harness, and the underlying codebase, along with the '/aps-rag' retrieval agent skill framework, to support reproduction and adoption at other facilities. Together, the deployed platform and its operations-grounded evaluation present a promising workflow for trustworthy, statistically grounded AI assistance in facility operations, transferable to other large scientific instruments.

physics.acc-ph↗