arXiv subjects

Elena Sergeeva

Publications and source records attributed to Elena Sergeeva.

4 recordsLinked to original sources

arXiv2026

Recasting Visual Language Models as EEG Foundation Models for Clinical Neurodiagnostics

Historically automated electroencephalography (EEG) systems was done using task-specific supervised models trained on purposely annotated data. A more recent modeling paradigm relies on creating a unified representation, or a 'foundation model', for multiple modality-specific tasks through large-scale domain-specific pretraining on the unannotated EEG signal. The quality of this unified representation directly depends on the availability of the modality-specific datasets. At the same time, generalist Vision Language Models (VLMs) exhibit broad few-shot learning capacities as well as good fine-tuning adaptability to different visual and language tasks. Can VLMs learn how to read and interpret EEG visually, emulating to a degree the way human clinicians inspect the EEG patterns? In this work we make a case that they can: we show that generalist VLMs without large-scale EEG pretraining perform competitively across a collection of clinical neuro-diagnostic tasks, can adapt to different tasks in a few-shot learning setting better than specialist foundation models, and exhibit better performance with model scaling when modality-specific models fail to exhibit.

cs.LG↗

arXiv2023

Right, No Matter Why: AI Fact-checking and AI Authority in Health-related Inquiry Settings

Previous research on expert advice-taking shows that humans exhibit two contradictory behaviors: on the one hand, people tend to overvalue their own opinions undervaluing the expert opinion, and on the other, people often defer to other people's advice even if the advice itself is rather obviously wrong. In our study, we conduct an exploratory evaluation of users' AI-advice accepting behavior when evaluating the truthfulness of a health-related statement in different "advice quality" settings. We find that even feedback that is confined to just stating that "the AI thinks that the statement is false/true" results in more than half of people moving their statement veracity assessment towards the AI suggestion. The different types of advice given influence the acceptance rates, but the sheer effect of getting a suggestion is often bigger than the suggestion-type effect.

cs.CL↗

arXiv2021

Explainable Deep Learning in Healthcare: A Methodological Survey from an Attribution View

The increasing availability of large collections of electronic health record (EHR) data and unprecedented technical advances in deep learning (DL) have sparked a surge of research interest in developing DL based clinical decision support systems for diagnosis, prognosis, and treatment. Despite the recognition of the value of deep learning in healthcare, impediments to further adoption in real healthcare settings remain due to the black-box nature of DL. Therefore, there is an emerging need for interpretable DL, which allows end users to evaluate the model decision making to know whether to accept or reject predictions and recommendations before an action is taken. In this review, we focus on the interpretability of the DL models in healthcare. We start by introducing the methods for interpretability in depth and comprehensively as a methodological reference for future researchers or clinical practitioners in this field. Besides the methods' details, we also include a discussion of advantages and disadvantages of these methods and which scenarios each of them is suitable for, so that interested readers can know how to compare and choose among them for use. Moreover, we discuss how these methods, originally developed for solving general-domain problems, have been adapted and applied to healthcare problems and how they can help physicians better understand these data-driven technologies. Overall, we hope this survey can help researchers and practitioners in both artificial intelligence (AI) and clinical fields understand what methods we have for enhancing the interpretability of their DL models and choose the optimal one accordingly.

cs.LG↗

arXiv2018

CliNER 2.0: Accessible and Accurate Clinical Concept Extraction

Clinical notes often describe important aspects of a patient's stay and are therefore critical to medical research. Clinical concept extraction (CCE) of named entities - such as problems, tests, and treatments - aids in forming an understanding of notes and provides a foundation for many downstream clinical decision-making tasks. Historically, this task has been posed as a standard named entity recognition (NER) sequence tagging problem, and solved with feature-based methods using handengineered domain knowledge. Recent advances, however, have demonstrated the efficacy of LSTM-based models for NER tasks, including CCE. This work presents CliNER 2.0, a simple-to-install, open-source tool for extracting concepts from clinical text. CliNER 2.0 uses a word- and character- level LSTM model, and achieves state-of-the-art performance. For ease of use, the tool also includes pre-trained models available for public use.

cs.CL↗