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Hanghang Tong

Publications and source records attributed to Hanghang Tong.

At least 55 records · Page 3Linked to original sources

TRIMS: Trajectory-Ranked Instruction Masked Supervision for Diffusion Language Models

Diffusion language models (DLMs) offer a promising path toward low-latency generation through parallel decoding, but their practical efficiency depends heavily on the decoding trajectory. In practice, this advantage often fails to fully materialize because standard training does not provide explicit supervision over token reveal order, creating a train-inference mismatch that leads to suboptimal decoding behavior. We propose Trajectory-Ranked Instruction Masked Supervision (TRIMS), a simple trajectory-guided supervised fine-tuning framework that injects trajectory supervision into standard Masked Diffusion Language Model (MDLM) training with minimal overhead. Instead of relying on costly DLM-based distillation, TRIMS uses lightweight signals from an autoregressive teacher to guide a trajectory-aware masking strategy, encouraging the model to learn more effective decoding orders. Experiments on LLaDA and Dream across math and coding benchmarks show that TRIMS significantly improves the accuracy-parallelism trade-off over both standard MDLM training and train-free acceleration baselines, while achieving competitive performance with prior distillation-based approaches at substantially lower training cost. Further analysis shows that TRIMS leads to better decoding trajectories, validating the effectiveness of trajectory-guided supervision for DLMs.

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Prune as You Generate: Online Rollout Pruning for Faster and Better RLVR

Reinforcement Learning with Verifiable Rewards (RLVR) has significantly advanced the reasoning capabilities of Large Language Models (LLMs). However, methods such as GRPO and DAPO suffer from substantial computational cost, since they rely on sampling many rollouts for each prompt. Moreover, in RLVR the relative advantage is often sparse: many samples become nearly all-correct or all-incorrect, yielding low within-group reward variance and thus weak learning signals. In this paper, we introduce arrol (Accelerating RLVR via online Rollout Pruning), an online rollout pruning method that prunes rollouts during generation while explicitly steering the surviving ones more correctness-balanced to enhance learning signals. Specifically, arrol trains a lightweight quality head on-the-fly to predict the success probability of partial rollouts and uses it to make early pruning decisions. The learned quality head can further weigh candidates to improve inference accuracy during test-time scaling. To improve efficiency, we present a system design that prunes rollouts inside the inference engine and re-batches the remaining ones for log-probability computation and policy updates. Across GRPO and DAPO on Qwen-3 and LLaMA-3.2 models (1B-8B), arrol improves average accuracy by +2.30 to +2.99 while achieving up to 1.7x training speedup, and yielding up to +8.33 additional gains in average accuracy in test-time scaling. The code is available at https://github.com/Hsu1023/ARRoL.

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Continual Low-Rank Adapters for LLM-based Generative Recommender Systems

While large language models (LLMs) achieve strong performance in recommendation, they face challenges in continual learning as users, items, and user preferences evolve over time. Existing LoRA-based continual methods primarily focus on preserving performance on previous tasks, but this overlooks the unique nature of recommendation: the goal is not to predict past preferences, and outdated preferences can even harm performance when current interests shift significantly. To address this, we propose PESO (Proximally rEgularized Single evolving lOra, a continual adaptation method for LoRA in recommendation. PESO introduces a proximal regularizer that anchors the current adapter to its most recent frozen state, enabling the model to flexibly balance adaptation and preservation, and to better capture recent user behaviors. Theoretically, we show that this proximal design provides data-aware, direction-wise guidance in the LoRA subspace. Empirically, PESO consistently outperforms existing LoRA-based continual learning methods.

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ReMix: Reinforcement routing for mixtures of LoRAs in LLM finetuning

Low-rank adapters (LoRAs) are a parameter-efficient finetuning technique that injects trainable low-rank matrices into pretrained models to adapt them to new tasks. Mixture-of-LoRAs models expand neural networks efficiently by routing each layer input to a small subset of specialized LoRAs of the layer. Existing Mixture-of-LoRAs routers assign a learned routing weight to each LoRA to enable end-to-end training of the router. Despite their empirical promise, we observe that the routing weights are typically extremely imbalanced across LoRAs in practice, where only one or two LoRAs often dominate the routing weights. This essentially limits the number of effective LoRAs and thus severely hinders the expressive power of existing Mixture-of-LoRAs models. In this work, we attribute this weakness to the nature of learnable routing weights and rethink the fundamental design of the router. To address this critical issue, we propose a new router designed that we call Reinforcement Routing for Mixture-of-LoRAs (ReMix). Our key idea is using non-learnable routing weights to ensure all active LoRAs to be equally effective, with no LoRA dominating the routing weights. However, our routers cannot be trained directly via gradient descent due to our non-learnable routing weights. Hence, we further propose an unbiased gradient estimator for the router by employing the reinforce leave-one-out (RLOO) technique, where we regard the supervision loss as the reward and the router as the policy in reinforcement learning. Our gradient estimator also enables to scale up training compute to boost the predictive performance of our ReMix. Extensive experiments demonstrate that our proposed ReMix significantly outperform state-of-the-art parameter-efficient finetuning methods under a comparable number of activated parameters.

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Flow Matching Meets Biology and Life Science: A Survey

Over the past decade, advances in generative modeling, such as generative adversarial networks, masked autoencoders, and diffusion models, have significantly transformed biological research and discovery, enabling breakthroughs in molecule design, protein generation, catalysis discovery, drug discovery, and beyond. At the same time, biological applications have served as valuable testbeds for evaluating the capabilities of generative models. Recently, flow matching has emerged as a powerful and efficient alternative to diffusion-based generative modeling, with growing interest in its application to problems in biology and life sciences. This paper presents the first comprehensive survey of recent developments in flow matching and its applications in biological domains. We begin by systematically reviewing the foundations and variants of flow matching, and then categorize its applications into three major areas: biological sequence modeling, molecule generation and design, and peptide and protein generation. For each, we provide an in-depth review of recent progress. We also summarize commonly used datasets and software tools, and conclude with a discussion of potential future directions. The corresponding curated resources are available at https://github.com/Violet24K/Awesome-Flow-Matching-Meets-Biology.

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Language in the Flow of Time: Time-Series-Paired Texts Weaved into a Unified Temporal Narrative

While many advances in time series models focus exclusively on numerical data, research on multimodal time series, particularly those involving contextual textual information, remains in its infancy. With recent progress in large language models and time series learning, we revisit the integration of paired texts with time series through the Platonic Representation Hypothesis, which posits that representations of different modalities converge to shared spaces. In this context, we identify that time-series-paired texts may naturally exhibit periodic properties that closely mirror those of the original time series. Building on this insight, we propose a novel framework, Texts as Time Series (TaTS), which considers the time-series-paired texts to be auxiliary variables of the time series. TaTS can be plugged into any existing numerical-only time series models and effectively enable them to handle time series data with paired texts. Through extensive experiments on both multimodal time series forecasting and imputation tasks across benchmark datasets with various existing time series models, we demonstrate that TaTS can enhance multimodal predictive performance without modifying model architectures. Our Code is available at https://github.com/iDEA-iSAIL-Lab-UIUC/TaTS.

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RM-R1: Reward Modeling as Reasoning

Reward modeling is essential for aligning large language models with human preferences through reinforcement learning. To provide accurate reward signals, a reward model (RM) should stimulate deep thinking and conduct interpretable reasoning before assigning a score or a judgment. Inspired by recent advances of long chain-of-thought on reasoning-intensive tasks, we hypothesize and validate that integrating reasoning into reward modeling significantly enhances RM's interpretability and performance. We introduce a new class of generative reward models, Reasoning Reward Models (ReasRMs), which formulate reward modeling as a reasoning task. We propose a reasoning-oriented training pipeline and train a family of ReasRMs, RM-R1. RM-R1 features a chain-of-rubrics (CoR) mechanism -- self-generating sample-level chat rubrics or math/code solutions, and evaluating candidate responses against them. The training of RM-R1 consists of two key stages: (1) distillation of high-quality reasoning chains and (2) reinforcement learning with verifiable rewards. Empirically, our models achieve superior performance across three reward model benchmarks on average, outperforming much larger open-weight models (e.g., INF-ORM-Llama3.1-70B) and proprietary ones (e.g., GPT-4o) by up to 4.9%. Beyond final performance, we perform thorough analyses to understand the key ingredients of successful ReasRM training.

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PLANETALIGN: A Comprehensive Python Library for Benchmarking Network Alignment

Network alignment (NA) aims to identify node correspondence across different networks and serves as a critical cornerstone behind various downstream multi-network learning tasks. Despite growing research in NA, there lacks a comprehensive library that facilitates the systematic development and benchmarking of NA methods. In this work, we introduce PLANETALIGN, a comprehensive Python library for network alignment that features a rich collection of built-in datasets, methods, and evaluation pipelines with easy-to-use APIs. Specifically, PLANETALIGN integrates 18 datasets and 14 NA methods with extensible APIs for easy use and development of NA methods. Our standardized evaluation pipeline encompasses a wide range of metrics, enabling a systematic assessment of the effectiveness, scalability, and robustness of NA methods. Through extensive comparative studies, we reveal practical insights into the strengths and limitations of existing NA methods. We hope that PLANETALIGN can foster a deeper understanding of the NA problem and facilitate the development and benchmarking of more effective, scalable, and robust methods in the future. The source code of PLANETALIGN is available at https://github.com/yq-leo/PlanetAlign.

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MC-Search: Evaluating and Enhancing Multimodal Agentic Search with Structured Long Reasoning Chains

With the increasing demand for step-wise, cross-modal, and knowledge-grounded reasoning, multimodal large language models (MLLMs) are evolving beyond the traditional fixed retrieve-then-generate paradigm toward more sophisticated agentic multimodal retrieval-augmented generation (MM-RAG). Existing benchmarks, however, mainly focus on simplified QA with short retrieval chains, leaving adaptive planning and multimodal reasoning underexplored. We present MC-Search, the first benchmark for agentic MM-RAG with long, step-wise annotated reasoning chains spanning five representative reasoning structures. Each example specifies sub-questions, retrieval modalities, supporting facts, and intermediate answers, with fidelity ensured by HAVE (Hop-wise Attribution and Verification of Evidence), resulting in 3,333 high-quality examples averaging 3.7 hops. Beyond answer accuracy, MC-Search introduces new process-level metrics for reasoning quality, stepwise retrieval and planning accuracy. By developing a unified agentic MM-RAG pipeline, we benchmark six leading MLLMs and reveal systematic issues such as over- and under-retrieval and modality-misaligned planning. Finally, we introduce Search-Align, a process-supervised fine-tuning framework leveraging verified reasoning chains, showing that our data not only enables faithful evaluation but also improves planning and retrieval fidelity in open-source MLLMs.

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Mixture of Sequence: Theme-Aware Mixture-of-Experts for Long-Sequence Recommendation

Sequential recommendation has rapidly advanced in click-through rate prediction due to its ability to model dynamic user interests. A key challenge, however, lies in modeling long sequences: users often exhibit significant interest shifts, introducing substantial irrelevant or misleading information. Our empirical analysis corroborates this challenge and uncovers a recurring behavioral pattern in long sequences (\textit{session hopping}): user interests remain stable within short temporal spans (\textit{sessions}) but shift drastically across sessions and may reappear after multiple sessions. To address this challenge, we propose the Mixture of Sequence (MoS) framework, a model-agnostic MoE approach that achieves accurate predictions by extracting theme-specific and multi-scale subsequences from noisy raw user sequences. First, MoS employs a theme-aware routing mechanism to adaptively learn the latent themes of user sequences and organizes these sequences into multiple coherent subsequences. Each subsequence contains only sessions aligned with a specific theme, thereby effectively filtering out irrelevant or even misleading information introduced by user interest shifts in session hopping. In addition, to alleviate potential information loss, we introduce a multi-scale fusion mechanism, which leverages three types of experts to capture global sequence characteristics, short-term user behaviors, and theme-specific semantic patterns. Together, these two mechanisms endow MoS with the ability to deliver accurate recommendations from multi-faceted and multi-scale perspectives. Experimental results demonstrate that MoS consistently achieves the SOTA performance while introducing fewer FLOPs compared with other MoE counterparts, providing strong evidence of its excellent balance between utility and efficiency. The code is available at https://github.com/xiaolin-cs/MoS.

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dLLM: Simple Diffusion Language Modeling

Although diffusion language models (DLMs) are evolving quickly, many recent models converge on a set of shared components. These components, however, are distributed across ad-hoc research codebases or lack transparent implementations, making them difficult to reproduce or extend. As the field accelerates, there is a clear need for a unified framework that standardizes these common components while remaining flexible enough to support new methods and architectures. To address this gap, we introduce dLLM, an open-source framework that unifies the core components of diffusion language modeling -- training, inference, and evaluation -- and makes them easy to customize for new designs. With dLLM, users can reproduce, finetune, deploy, and evaluate open-source large DLMs such as LLaDA and Dream through a standardized pipeline. The framework also provides minimal, reproducible recipes for building small DLMs from scratch with accessible compute, including converting any BERT-style encoder or autoregressive LM into a DLM. We also release the checkpoints of these small DLMs to make DLMs more accessible and accelerate future research.

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FeDecider: An LLM-Based Framework for Federated Cross-Domain Recommendation

Federated cross-domain recommendation (Federated CDR) aims to collaboratively learn personalized recommendation models across heterogeneous domains while preserving data privacy. Recently, large language model (LLM)-based recommendation models have demonstrated impressive performance by leveraging LLMs' strong reasoning capabilities and broad knowledge. However, adopting LLM-based recommendation models in Federated CDR scenarios introduces new challenges. First, there exists a risk of overfitting with domain-specific local adapters. The magnitudes of locally optimized parameter updates often vary across domains, causing biased aggregation and overfitting toward domain-specific distributions. Second, unlike traditional recommendation models (e.g., collaborative filtering, bipartite graph-based methods) that learn explicit and comparable user/item representations, LLMs encode knowledge implicitly through autoregressive text generation training. This poses additional challenges for effectively measuring the cross-domain similarities under heterogeneity. To address these challenges, we propose an LLM-based framework for federated cross-domain recommendation, FeDecider. Specifically, FeDecider tackles the challenge of scale-specific noise by disentangling each client's low-rank updates and sharing only their directional components. To handle the need for flexible and effective integration, each client further learns personalized weights that achieve the data-aware integration of updates from other domains. Extensive experiments across diverse datasets validate the effectiveness of our proposed FeDecider.

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Pave Your Own Path: Graph Gradual Domain Adaptation on Fused Gromov-Wasserstein Geodesics

Graph neural networks, despite their impressive performance, are highly vulnerable to distribution shifts on graphs. Existing graph domain adaptation (graph DA) methods often implicitly assume a mild shift between source and target graphs, limiting their applicability to real-world scenarios with large shifts. Gradual domain adaptation (GDA) has emerged as a promising approach for addressing large shifts by gradually adapting the source model to the target domain via a path of unlabeled intermediate domains. Existing GDA methods exclusively focus on independent and identically distributed (IID) data with a predefined path, leaving their extension to non-IID graphs without a given path an open challenge. To bridge this gap, we present Gadget, the first GDA framework for non-IID graph data. First (theoretical foundation), the Fused Gromov-Wasserstein (FGW) distance is adopted as the domain discrepancy for non-IID graphs, based on which, we derive an error bound on node, edge and graph-level tasks, showing that the target domain error is proportional to the length of the path. Second (optimal path), guided by the error bound, we identify the FGW geodesic as the optimal path, which can be efficiently generated by our proposed algorithm. The generated path can be seamlessly integrated with existing graph DA methods to handle large shifts on graphs, improving state-of-the-art graph DA methods by up to 6.8% in accuracy on real-world datasets.

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Graph homophily booster: Reimagining the role of discrete features in heterophilic graph learning

Graph neural networks (GNNs) have emerged as a powerful tool for modeling graph-structured data. However, existing GNNs often struggle with heterophilic graphs, where connected nodes tend to have dissimilar features or labels. While numerous methods have been proposed to address this challenge, they primarily focus on architectural designs without directly targeting the root cause of the heterophily problem. These approaches still perform even worse than the simplest MLPs on challenging heterophilic datasets. For instance, our experiments show that 21 latest GNNs still fall behind the MLP on the Actor dataset. This critical challenge calls for an innovative approach to addressing graph heterophily beyond architectural designs. To bridge this gap, we propose and study a new and unexplored paradigm: directly increasing the graph homophily via a carefully designed graph transformation. In this work, we present a simple yet effective framework called GRAPHITE to address graph heterophily. To the best of our knowledge, this work is the first method that explicitly transforms the graph to directly improve the graph homophily. Stemmed from the exact definition of homophily, our proposed GRAPHITE creates feature nodes to facilitate homophilic message passing between nodes that share similar features. Furthermore, we both theoretically and empirically show that our proposed GRAPHITE significantly increases the homophily of originally heterophilic graphs, with only a slight increase in the graph size. Extensive experiments on challenging datasets demonstrate that our proposed GRAPHITE significantly outperforms state-of-the-art methods on heterophilic graphs while achieving comparable accuracy with state-of-the-art methods on homophilic graphs.

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Geometric-disentangelment Unlearning

Large language models (LLMs) can internalize private or harmful content, motivating unlearning that removes a forget set while preserving retaining knowledge. However, forgetting updates often cause collateral degradation on retaining knowledge, creating a persistent trade-off. Existing LLM unlearning methods are often heuristic, and other theoretical approaches rely on offline feature constructions that do not capture update-time forget-retain interaction in LLMs. To address this limitation, we aim to develop an LLM unlearning method that reduces the forget-retain trade-off with theoretical guarantees. We take a first-principles view by formalizing "no side effects" as local retain invariance under small parameter updates, and prove an equivalence under optimizer-induced geometry: the retain loss is locally invariant if and only if the update direction is orthogonal to the subspace spanned by retain gradients. Based on the insight, we propose Geometric-disentanglement Unlearning (GU), a lightweight and theoretically grounded projection that can be plug-and-play to existing gradient-based unlearning methods to mitigate forget-retain side effects. Experiments on TOFU, MUSE, and WMDP-cyber show that GU strengthens forgetting while reducing retain drift. When added to SimNPO, it achieves up to 62\% improved forgetting Extraction Strength (ES) and 31\% higher retain ES. We open-sourced our code in https://github.com/Lemutisme/Geometric-Unlearning.

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How to Make LMs Strong Node Classifiers?

Language Models (LMs) are increasingly challenging the dominance of domain-specific models, such as Graph Neural Networks (GNNs) and Graph Transformers (GTs), in graph learning tasks. Following this trend, we propose a novel approach that empowers off-the-shelf LMs to achieve performance comparable to state-of-the-art (SOTA) GNNs on node classification tasks, without requiring any architectural modification. By preserving the LM's original architecture, our approach retains a key benefit of LM instruction tuning: the ability to jointly train on diverse datasets, fostering greater flexibility and efficiency. To achieve this, we introduce two key augmentation strategies: (1) Enriching LMs' input using topological and semantic retrieval methods, which provide richer contextual information, and (2) guiding the LMs' classification process through a lightweight GNN classifier that effectively prunes class candidates. Our experiments on real-world datasets show that backbone Flan-T5 LMs equipped with these augmentation strategies outperform SOTA text-output node classifiers and are comparable to top-performing vector-output node classifiers. By bridging the gap between specialized node classifiers and general LMs, this work paves the way for more versatile and widely applicable graph learning models. We will open-source the code upon publication.

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Do VLMs Have a Moral Backbone? A Study on the Fragile Morality of Vision-Language Models

Despite substantial efforts toward improving the moral alignment of Vision-Language Models (VLMs), it remains unclear whether their ethical judgments are stable in realistic settings. This work studies moral robustness in VLMs, defined as the ability to preserve moral judgments under textual and visual perturbations that do not alter the underlying moral context. We systematically probe VLMs with a diverse set of model-agnostic multimodal perturbations and find that their moral stances are highly fragile, frequently flipping under simple manipulations. Our analysis reveals systematic vulnerabilities across perturbation types, moral domains, and model scales, including a sycophancy trade-off where stronger instruction-following models are more susceptible to persuasion. We further show that lightweight inference-time interventions can partially restore moral stability. These results demonstrate that moral alignment alone is insufficient and that moral robustness is a necessary criterion for the responsible deployment of VLMs.

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Harnessing Consistency for Robust Test-Time LLM Ensemble

Different large language models (LLMs) exhibit diverse strengths and weaknesses, and LLM ensemble serves as a promising approach to integrate their complementary capabilities. Despite substantial progress in improving ensemble quality, limited attention has been paid to the robustness of ensembles against potential erroneous signals, which often arise from heterogeneous tokenization schemes and varying model expertise. Our analysis shows that ensemble failures typically arise from both the token level and the model level: the former reflects severe disagreement in token predictions, while the latter involves low confidence and pronounced disparities among models. In light of this, we propose CoRE, a plug-and-play technique that harnesses model consistency for robust LLM ensemble, which can be seamlessly integrated with diverse ensemble methods. *Token-level consistency* captures fine-grained disagreements by applying a low-pass filter to downweight uncertain tokens with high inconsistency, often due to token misalignment, thereby improving robustness at a granular level. *Model-level consistency* models global agreement by promoting model outputs with high self-confidence and minimal divergence from others, enhancing robustness at a coarser level. Extensive experiments across diverse benchmarks, model combinations, and ensemble strategies demonstrate that CoRE consistently improves ensemble performance and robustness. Our code is available at https://github.com/zhichenz98/CoRE-EACL26.

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