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Hui Xue

Publications and source records attributed to Hui Xue.

At least 127 records · Page 7Linked to original sources

Advancing low-field MRI with a universal denoising imaging transformer: Towards fast and high-quality imaging

Recent developments in low-field (LF) magnetic resonance imaging (MRI) systems present remarkable opportunities for affordable and widespread MRI access. A robust denoising method to overcome the intrinsic low signal-noise-ratio (SNR) barrier is critical to the success of LF MRI. However, current data-driven MRI denoising methods predominantly handle magnitude images and rely on customized models with constrained data diversity and quantity, which exhibit limited generalizability in clinical applications across diverse MRI systems, pulse sequences, and organs. In this study, we present ImT-MRD: a complex-valued imaging transformer trained on a vast number of clinical MRI scans aiming at universal MR denoising at LF systems. Compared with averaging multiple-repeated scans for higher image SNR, the model obtains better image quality from fewer repetitions, demonstrating its capability for accelerating scans under various clinical settings. Moreover, with its complex-valued image input, the model can denoise intermediate results before advanced post-processing and prepare high-quality data for further MRI research. By delivering universal and accurate denoising across clinical and research tasks, our model holds great promise to expedite the evolution of LF MRI for accessible and equal biomedical applications.

eess.IV↗

Convolutional Neural Network Transformer (CNNT) for Fluorescence Microscopy image Denoising with Improved Generalization and Fast Adaptation

Deep neural networks have been applied to improve the image quality of fluorescence microscopy imaging. Previous methods are based on convolutional neural networks (CNNs) which generally require more time-consuming training of separate models for each new imaging experiment, impairing the applicability and generalization. Once the model is trained (typically with tens to hundreds of image pairs) it can then be used to enhance new images that are like the training data. In this study, we proposed a novel imaging-transformer based model, Convolutional Neural Network Transformer (CNNT), to outperform the CNN networks for image denoising. In our scheme we have trained a single CNNT based backbone model from pairwise high-low SNR images for one type of fluorescence microscope (instance structured illumination, iSim). Fast adaption to new applications was achieved by fine-tuning the backbone on only 5-10 sample pairs per new experiment. Results show the CNNT backbone and fine-tuning scheme significantly reduces the training time and improves the image quality, outperformed training separate models using CNN approaches such as - RCAN and Noise2Fast. Here we show three examples of the efficacy of this approach on denoising wide-field, two-photon and confocal fluorescence data. In the confocal experiment, which is a 5 by 5 tiled acquisition, the fine-tuned CNNT model reduces the scan time form one hour to eight minutes, with improved quality.

q-bio.QM↗

Imaging transformer for MRI denoising with the SNR unit training: enabling generalization across field-strengths, imaging contrasts, and anatomy

The ability to recover MRI signal from noise is key to achieve fast acquisition, accurate quantification, and high image quality. Past work has shown convolutional neural networks can be used with abundant and paired low and high-SNR images for training. However, for applications where high-SNR data is difficult to produce at scale (e.g. with aggressive acceleration, high resolution, or low field strength), training a new denoising network using a large quantity of high-SNR images can be infeasible. In this study, we overcome this limitation by improving the generalization of denoising models, enabling application to many settings beyond what appears in the training data. Specifically, we a) develop a training scheme that uses complex MRIs reconstructed in the SNR units (i.e., the images have a fixed noise level, SNR unit training) and augments images with realistic noise based on coil g-factor, and b) develop a novel imaging transformer (imformer) to handle 2D, 2D+T, and 3D MRIs in one model architecture. Through empirical evaluation, we show this combination improves performance compared to CNN models and improves generalization, enabling a denoising model to be used across field-strengths, image contrasts, and anatomy.

eess.IV↗

Inline AI: Open-source Deep Learning Inference for Cardiac MR

Cardiac Magnetic Resonance (CMR) is established as a non-invasive imaging technique for evaluation of heart function, anatomy, and myocardial tissue characterization. Quantitative biomarkers are central for diagnosis and management of heart disease. Deep learning (DL) is playing an ever more important role in extracting these quantitative measures from CMR images. While many researchers have reported promising results in training and evaluating models, model deployment into the imaging workflow is less explored. A new imaging AI framework, the InlineAI, was developed and open-sourced. The main innovation is to enable the model inference inline as a part of imaging computation, instead of as an offline post-processing step and to allow users to plug in their models. We demonstrate the system capability on three applications: long-axis CMR cine landmark detection, short-axis CMR cine analysis of function and anatomy, and quantitative perfusion mapping. The InlineAI allowed models to be deployed into imaging workflow in a streaming manner directly on the scanner. The model was loaded and inference on incoming images were performed while the data acquisition was ongoing, and results were sent back to scanner. Several biomarkers were extracted from model outputs in the demonstrated applications and reported as curves and tabular values. All processes are full automated. the model inference was completed within 6-45s after the end of imaging data acquisition.

eess.IV↗

Zippo: Zipping Color and Transparency Distributions into a Single Diffusion Model

Beyond the superiority of the text-to-image diffusion model in generating high-quality images, recent studies have attempted to uncover its potential for adapting the learned semantic knowledge to visual perception tasks. In this work, instead of translating a generative diffusion model into a visual perception model, we explore to retain the generative ability with the perceptive adaptation. To accomplish this, we present Zippo, a unified framework for zipping the color and transparency distributions into a single diffusion model by expanding the diffusion latent into a joint representation of RGB images and alpha mattes. By alternatively selecting one modality as the condition and then applying the diffusion process to the counterpart modality, Zippo is capable of generating RGB images from alpha mattes and predicting transparency from input images. In addition to single-modality prediction, we propose a modality-aware noise reassignment strategy to further empower Zippo with jointly generating RGB images and its corresponding alpha mattes under the text guidance. Our experiments showcase Zippo's ability of efficient text-conditioned transparent image generation and present plausible results of Matte-to-RGB and RGB-to-Matte translation.

cs.CV↗

TRELM: Towards Robust and Efficient Pre-training for Knowledge-Enhanced Language Models

KEPLMs are pre-trained models that utilize external knowledge to enhance language understanding. Previous language models facilitated knowledge acquisition by incorporating knowledge-related pre-training tasks learned from relation triples in knowledge graphs. However, these models do not prioritize learning embeddings for entity-related tokens. Moreover, updating the entire set of parameters in KEPLMs is computationally demanding. This paper introduces TRELM, a Robust and Efficient Pre-training framework for Knowledge-Enhanced Language Models. We observe that entities in text corpora usually follow the long-tail distribution, where the representations of some entities are suboptimally optimized and hinder the pre-training process for KEPLMs. To tackle this, we employ a robust approach to inject knowledge triples and employ a knowledge-augmented memory bank to capture valuable information. Furthermore, updating a small subset of neurons in the feed-forward networks (FFNs) that store factual knowledge is both sufficient and efficient. Specifically, we utilize dynamic knowledge routing to identify knowledge paths in FFNs and selectively update parameters during pre-training. Experimental results show that TRELM reduces pre-training time by at least 50% and outperforms other KEPLMs in knowledge probing tasks and multiple knowledge-aware language understanding tasks.

cs.CL↗

One-Dimensional Adapter to Rule Them All: Concepts, Diffusion Models and Erasing Applications

The prevalent use of commercial and open-source diffusion models (DMs) for text-to-image generation prompts risk mitigation to prevent undesired behaviors. Existing concept erasing methods in academia are all based on full parameter or specification-based fine-tuning, from which we observe the following issues: 1) Generation alternation towards erosion: Parameter drift during target elimination causes alternations and potential deformations across all generations, even eroding other concepts at varying degrees, which is more evident with multi-concept erased; 2) Transfer inability & deployment inefficiency: Previous model-specific erasure impedes the flexible combination of concepts and the training-free transfer towards other models, resulting in linear cost growth as the deployment scenarios increase. To achieve non-invasive, precise, customizable, and transferable elimination, we ground our erasing framework on one-dimensional adapters to erase multiple concepts from most DMs at once across versatile erasing applications. The concept-SemiPermeable structure is injected as a Membrane (SPM) into any DM to learn targeted erasing, and meantime the alteration and erosion phenomenon is effectively mitigated via a novel Latent Anchoring fine-tuning strategy. Once obtained, SPMs can be flexibly combined and plug-and-play for other DMs without specific re-tuning, enabling timely and efficient adaptation to diverse scenarios. During generation, our Facilitated Transport mechanism dynamically regulates the permeability of each SPM to respond to different input prompts, further minimizing the impact on other concepts. Quantitative and qualitative results across ~40 concepts, 7 DMs and 4 erasing applications have demonstrated the superior erasing of SPM. Our code and pre-tuned SPMs are available on the project page https://lyumengyao.github.io/projects/spm.

cs.CV↗

Spectral Invariant Learning for Dynamic Graphs under Distribution Shifts

Dynamic graph neural networks (DyGNNs) currently struggle with handling distribution shifts that are inherent in dynamic graphs. Existing work on DyGNNs with out-of-distribution settings only focuses on the time domain, failing to handle cases involving distribution shifts in the spectral domain. In this paper, we discover that there exist cases with distribution shifts unobservable in the time domain while observable in the spectral domain, and propose to study distribution shifts on dynamic graphs in the spectral domain for the first time. However, this investigation poses two key challenges: i) it is non-trivial to capture different graph patterns that are driven by various frequency components entangled in the spectral domain; and ii) it remains unclear how to handle distribution shifts with the discovered spectral patterns. To address these challenges, we propose Spectral Invariant Learning for Dynamic Graphs under Distribution Shifts (SILD), which can handle distribution shifts on dynamic graphs by capturing and utilizing invariant and variant spectral patterns. Specifically, we first design a DyGNN with Fourier transform to obtain the ego-graph trajectory spectrums, allowing the mixed dynamic graph patterns to be transformed into separate frequency components. We then develop a disentangled spectrum mask to filter graph dynamics from various frequency components and discover the invariant and variant spectral patterns. Finally, we propose invariant spectral filtering, which encourages the model to rely on invariant patterns for generalization under distribution shifts. Experimental results on synthetic and real-world dynamic graph datasets demonstrate the superiority of our method for both node classification and link prediction tasks under distribution shifts.

cs.LG↗

Understanding the Weakness of Large Language Model Agents within a Complex Android Environment

Large language models (LLMs) have empowered intelligent agents to execute intricate tasks within domain-specific software such as browsers and games. However, when applied to general-purpose software systems like operating systems, LLM agents face three primary challenges. Firstly, the action space is vast and dynamic, posing difficulties for LLM agents to maintain an up-to-date understanding and deliver accurate responses. Secondly, real-world tasks often require inter-application cooperation}, demanding farsighted planning from LLM agents. Thirdly, agents need to identify optimal solutions aligning with user constraints, such as security concerns and preferences. These challenges motivate AndroidArena, an environment and benchmark designed to evaluate LLM agents on a modern operating system. To address high-cost of manpower, we design a scalable and semi-automated method to construct the benchmark. In the task evaluation, AndroidArena incorporates accurate and adaptive metrics to address the issue of non-unique solutions. Our findings reveal that even state-of-the-art LLM agents struggle in cross-APP scenarios and adhering to specific constraints. Additionally, we identify a lack of four key capabilities, i.e., understanding, reasoning, exploration, and reflection, as primary reasons for the failure of LLM agents. Furthermore, we provide empirical analysis on the failure of reflection, and improve the success rate by 27% with our proposed exploration strategy. This work is the first to present valuable insights in understanding fine-grained weakness of LLM agents, and offers a path forward for future research in this area. Environment, benchmark, and evaluation code for AndroidArena are released at https://github.com/AndroidArenaAgent/AndroidArena.

cs.AI↗

Improving Scene Text Image Super-resolution via Dual Prior Modulation Network

Scene text image super-resolution (STISR) aims to simultaneously increase the resolution and legibility of the text images, and the resulting images will significantly affect the performance of downstream tasks. Although numerous progress has been made, existing approaches raise two crucial issues: (1) They neglect the global structure of the text, which bounds the semantic determinism of the scene text. (2) The priors, e.g., text prior or stroke prior, employed in existing works, are extracted from pre-trained text recognizers. That said, such priors suffer from the domain gap including low resolution and blurriness caused by poor imaging conditions, leading to incorrect guidance. Our work addresses these gaps and proposes a plug-and-play module dubbed Dual Prior Modulation Network (DPMN), which leverages dual image-level priors to bring performance gain over existing approaches. Specifically, two types of prior-guided refinement modules, each using the text mask or graphic recognition result of the low-quality SR image from the preceding layer, are designed to improve the structural clarity and semantic accuracy of the text, respectively. The following attention mechanism hence modulates two quality-enhanced images to attain a superior SR result. Extensive experiments validate that our method improves the image quality and boosts the performance of downstream tasks over five typical approaches on the benchmark. Substantial visualizations and ablation studies demonstrate the advantages of the proposed DPMN. Code is available at: https://github.com/jdfxzzy/DPMN.

cs.CV↗

DoubleAUG: Single-domain Generalized Object Detector in Urban via Color Perturbation and Dual-style Memory

Object detection in urban scenarios is crucial for autonomous driving in intelligent traffic systems. However, unlike conventional object detection tasks, urban-scene images vary greatly in style. For example, images taken on sunny days differ significantly from those taken on rainy days. Therefore, models trained on sunny day images may not generalize well to rainy day images. In this paper, we aim to solve the single-domain generalizable object detection task in urban scenarios, meaning that a model trained on images from one weather condition should be able to perform well on images from any other weather conditions. To address this challenge, we propose a novel Double AUGmentation (DoubleAUG) method that includes image- and feature-level augmentation schemes. In the image-level augmentation, we consider the variation in color information across different weather conditions and propose a Color Perturbation (CP) method that randomly exchanges the RGB channels to generate various images. In the feature-level augmentation, we propose to utilize a Dual-Style Memory (DSM) to explore the diverse style information on the entire dataset, further enhancing the model's generalization capability. Extensive experiments demonstrate that our proposed method outperforms state-of-the-art methods. Furthermore, ablation studies confirm the effectiveness of each module in our proposed method. Moreover, our method is plug-and-play and can be integrated into existing methods to further improve model performance.

cs.CV↗

Large Language Models Can be Lazy Learners: Analyze Shortcuts in In-Context Learning

Large language models (LLMs) have recently shown great potential for in-context learning, where LLMs learn a new task simply by conditioning on a few input-label pairs (prompts). Despite their potential, our understanding of the factors influencing end-task performance and the robustness of in-context learning remains limited. This paper aims to bridge this knowledge gap by investigating the reliance of LLMs on shortcuts or spurious correlations within prompts. Through comprehensive experiments on classification and extraction tasks, we reveal that LLMs are "lazy learners" that tend to exploit shortcuts in prompts for downstream tasks. Additionally, we uncover a surprising finding that larger models are more likely to utilize shortcuts in prompts during inference. Our findings provide a new perspective on evaluating robustness in in-context learning and pose new challenges for detecting and mitigating the use of shortcuts in prompts.

cs.CL↗

Model Inversion Attack via Dynamic Memory Learning

Model Inversion (MI) attacks aim to recover the private training data from the target model, which has raised security concerns about the deployment of DNNs in practice. Recent advances in generative adversarial models have rendered them particularly effective in MI attacks, primarily due to their ability to generate high-fidelity and perceptually realistic images that closely resemble the target data. In this work, we propose a novel Dynamic Memory Model Inversion Attack (DMMIA) to leverage historically learned knowledge, which interacts with samples (during the training) to induce diverse generations. DMMIA constructs two types of prototypes to inject the information about historically learned knowledge: Intra-class Multicentric Representation (IMR) representing target-related concepts by multiple learnable prototypes, and Inter-class Discriminative Representation (IDR) characterizing the memorized samples as learned prototypes to capture more privacy-related information. As a result, our DMMIA has a more informative representation, which brings more diverse and discriminative generated results. Experiments on multiple benchmarks show that DMMIA performs better than state-of-the-art MI attack methods.

cs.CV↗

Revisiting and Exploring Efficient Fast Adversarial Training via LAW: Lipschitz Regularization and Auto Weight Averaging

Fast Adversarial Training (FAT) not only improves the model robustness but also reduces the training cost of standard adversarial training. However, fast adversarial training often suffers from Catastrophic Overfitting (CO), which results in poor robustness performance. Catastrophic Overfitting describes the phenomenon of a sudden and significant decrease in robust accuracy during the training of fast adversarial training. Many effective techniques have been developed to prevent Catastrophic Overfitting and improve the model robustness from different perspectives. However, these techniques adopt inconsistent training settings and require different training costs, i.e, training time and memory costs, leading to unfair comparisons. In this paper, we conduct a comprehensive study of over 10 fast adversarial training methods in terms of adversarial robustness and training costs. We revisit the effectiveness and efficiency of fast adversarial training techniques in preventing Catastrophic Overfitting from the perspective of model local nonlinearity and propose an effective Lipschitz regularization method for fast adversarial training. Furthermore, we explore the effect of data augmentation and weight averaging in fast adversarial training and propose a simple yet effective auto weight averaging method to improve robustness further. By assembling these techniques, we propose a FGSM-based fast adversarial training method equipped with Lipschitz regularization and Auto Weight averaging, abbreviated as FGSM-LAW. Experimental evaluations on four benchmark databases demonstrate the superiority of the proposed method over state-of-the-art fast adversarial training methods and the advanced standard adversarial training methods.

cs.CV↗

COCO-O: A Benchmark for Object Detectors under Natural Distribution Shifts

Practical object detection application can lose its effectiveness on image inputs with natural distribution shifts. This problem leads the research community to pay more attention on the robustness of detectors under Out-Of-Distribution (OOD) inputs. Existing works construct datasets to benchmark the detector's OOD robustness for a specific application scenario, e.g., Autonomous Driving. However, these datasets lack universality and are hard to benchmark general detectors built on common tasks such as COCO. To give a more comprehensive robustness assessment, we introduce COCO-O(ut-of-distribution), a test dataset based on COCO with 6 types of natural distribution shifts. COCO-O has a large distribution gap with training data and results in a significant 55.7% relative performance drop on a Faster R-CNN detector. We leverage COCO-O to conduct experiments on more than 100 modern object detectors to investigate if their improvements are credible or just over-fitting to the COCO test set. Unfortunately, most classic detectors in early years do not exhibit strong OOD generalization. We further study the robustness effect on recent breakthroughs of detector's architecture design, augmentation and pre-training techniques. Some empirical findings are revealed: 1) Compared with detection head or neck, backbone is the most important part for robustness; 2) An end-to-end detection transformer design brings no enhancement, and may even reduce robustness; 3) Large-scale foundation models have made a great leap on robust object detection. We hope our COCO-O could provide a rich testbed for robustness study of object detection. The dataset will be available at https://github.com/alibaba/easyrobust/tree/main/benchmarks/coco_o.

cs.CV↗

Robust Automatic Speech Recognition via WavAugment Guided Phoneme Adversarial Training

Developing a practically-robust automatic speech recognition (ASR) is challenging since the model should not only maintain the original performance on clean samples, but also achieve consistent efficacy under small volume perturbations and large domain shifts. To address this problem, we propose a novel WavAugment Guided Phoneme Adversarial Training (wapat). wapat use adversarial examples in phoneme space as augmentation to make the model invariant to minor fluctuations in phoneme representation and preserve the performance on clean samples. In addition, wapat utilizes the phoneme representation of augmented samples to guide the generation of adversaries, which helps to find more stable and diverse gradient-directions, resulting in improved generalization. Extensive experiments demonstrate the effectiveness of wapat on End-to-end Speech Challenge Benchmark (ESB). Notably, SpeechLM-wapat outperforms the original model by 6.28% WER reduction on ESB, achieving the new state-of-the-art.

cs.SD↗

From Adversarial Arms Race to Model-centric Evaluation: Motivating a Unified Automatic Robustness Evaluation Framework

Textual adversarial attacks can discover models' weaknesses by adding semantic-preserved but misleading perturbations to the inputs. The long-lasting adversarial attack-and-defense arms race in Natural Language Processing (NLP) is algorithm-centric, providing valuable techniques for automatic robustness evaluation. However, the existing practice of robustness evaluation may exhibit issues of incomprehensive evaluation, impractical evaluation protocol, and invalid adversarial samples. In this paper, we aim to set up a unified automatic robustness evaluation framework, shifting towards model-centric evaluation to further exploit the advantages of adversarial attacks. To address the above challenges, we first determine robustness evaluation dimensions based on model capabilities and specify the reasonable algorithm to generate adversarial samples for each dimension. Then we establish the evaluation protocol, including evaluation settings and metrics, under realistic demands. Finally, we use the perturbation degree of adversarial samples to control the sample validity. We implement a toolkit RobTest that realizes our automatic robustness evaluation framework. In our experiments, we conduct a robustness evaluation of RoBERTa models to demonstrate the effectiveness of our evaluation framework, and further show the rationality of each component in the framework. The code will be made public at \url{https://github.com/thunlp/RobTest}.

cs.CL↗

Joint Generative-Contrastive Representation Learning for Anomalous Sound Detection

In this paper, we propose a joint generative and contrastive representation learning method (GeCo) for anomalous sound detection (ASD). GeCo exploits a Predictive AutoEncoder (PAE) equipped with self-attention as a generative model to perform frame-level prediction. The output of the PAE together with original normal samples, are used for supervised contrastive representative learning in a multi-task framework. Besides cross-entropy loss between classes, contrastive loss is used to separate PAE output and original samples within each class. GeCo aims to better capture context information among frames, thanks to the self-attention mechanism for PAE model. Furthermore, GeCo combines generative and contrastive learning from which we aim to yield more effective and informative representations, compared to existing methods. Extensive experiments have been conducted on the DCASE2020 Task2 development dataset, showing that GeCo outperforms state-of-the-art generative and discriminative methods.

eess.AS↗