arXiv subjects

J. Nathan Kutz

Publications and source records attributed to J. Nathan Kutz.

At least 73 records · Page 4Linked to original sources

arXiv2024

Data-Driven Discovery of a New Ginzburg-Landau Reduced-Order Model for Vortex Shedding

Vortex shedding is an important physical phenomenon observed across many spatial and temporal scales in fluids. Previous experimental and theoretical studies have established a hierarchy of local and global reduced-order models for vortex shedding based on the Stuart-Landau and Ginzburg-Landau equations. In this work, we employ data-driven methods to discover a new Landau variable for the complex Ginzburg-Landau equation (CGLE) for periodic two-dimensional vortex shedding past a cylinder. We first coarse grain vorticity field data from direct numerical simulations of the fluid by integrating over the vertical spatial dimension, and then time-delay embed this new variable to obtain phase information necessary for CGLE analysis. Finally, we use the sparse identification of nonlinear dynamics (SINDy) to learn an interpretable system of coupled real partial differential equations that balance model complexity and prediction error. We develop local homogeneous models in key regions of the wake, as well as global heterogeneous models that are parameterized by the streamwise coordinate across the entire wake. After computing the normal-form parameters from the discovered equations, we classify the different models and determine behavior and stability in the different regions of the wake, demonstrating the validity of these models across a range of spatiotemporal subdomains. Different dynamics are found to dominate at different stations within the wake. In addition to introducing a novel Landau variable for vortex shedding, this work may also help characterize other vortex shedding systems and inform the design of control schemes.

physics.flu-dyn↗

arXiv2024

Reservoir computing for system identification and predictive control with limited data

Model predictive control (MPC) is an industry standard control technique that iteratively solves an open-loop optimization problem to guide a system towards a desired state or trajectory. Consequently, an accurate forward model of system dynamics is critical for the efficacy of MPC and much recent work has been aimed at the use of neural networks to act as data-driven surrogate models to enable MPC. Perhaps the most common network architecture applied to this task is the recurrent neural network (RNN) due to its natural interpretation as a dynamical system. In this work, we assess the ability of RNN variants to both learn the dynamics of benchmark control systems and serve as surrogate models for MPC. We find that echo state networks (ESNs) have a variety of benefits over competing architectures, namely reductions in computational complexity, longer valid prediction times, and reductions in cost of the MPC objective function.

eess.SY↗

arXiv2024

Towards a Reliable Offline Personal AI Assistant for Long Duration Spaceflight

As humanity prepares for new missions to the Moon and Mars, astronauts will need to operate with greater autonomy, given the communication delays that make real-time support from Earth difficult. For instance, messages between Mars and Earth can take up to 24 minutes, making quick responses impossible. This limitation poses a challenge for astronauts who must rely on in-situ tools to access the large volume of data from spacecraft sensors, rovers, and satellites, data that is often fragmented and difficult to use. To bridge this gap, systems like the Mars Exploration Telemetry-Driven Information System (METIS) are being developed. METIS is an AI assistant designed to handle routine tasks, monitor spacecraft systems, and detect anomalies, all while reducing the reliance on mission control. Current Generative Pretrained Transformer (GPT) Models, while powerful, struggle in safety-critical environments. They can generate plausible but incorrect responses, a phenomenon known as "hallucination," which could endanger astronauts. To overcome these limitations, this paper proposes enhancing systems like METIS by integrating GPTs, Retrieval-Augmented Generation (RAG), Knowledge Graphs (KGs), and Augmented Reality (AR). The idea is to allow astronauts to interact with their data more intuitively, using natural language queries and visualizing real-time information through AR. KGs will be used to easily access live telemetry and multimodal data, ensuring that astronauts have the right information at the right time. By combining AI, KGs, and AR, this new system will empower astronauts to work more autonomously, safely, and efficiently during future space missions.

cs.AI↗

arXiv2024

Deep Generative Modeling for Identification of Noisy, Non-Stationary Dynamical Systems

A significant challenge in many fields of science and engineering is making sense of time-dependent measurement data by recovering governing equations in the form of differential equations. We focus on finding parsimonious ordinary differential equation (ODE) models for nonlinear, noisy, and non-autonomous dynamical systems and propose a machine learning method for data-driven system identification. While many methods tackle noisy and limited data, non-stationarity - where differential equation parameters change over time - has received less attention. Our method, dynamic SINDy, combines variational inference with SINDy (sparse identification of nonlinear dynamics) to model time-varying coefficients of sparse ODEs. This framework allows for uncertainty quantification of ODE coefficients, expanding on previous methods for autonomous systems. These coefficients are then interpreted as latent variables and added to the system to obtain an autonomous dynamical model. We validate our approach using synthetic data, including nonlinear oscillators and the Lorenz system, and apply it to neuronal activity data from C. elegans. Dynamic SINDy uncovers a global nonlinear model, showing it can handle real, noisy, and chaotic datasets. We aim to apply our method to a variety of problems, specifically dynamic systems with complex time-dependent parameters.

cs.LG↗

arXiv2024

AI Assistants for Spaceflight Procedures: Combining Generative Pre-Trained Transformer and Retrieval-Augmented Generation on Knowledge Graphs With Augmented Reality Cues

This paper describes the capabilities and potential of the intelligent personal assistant (IPA) CORE (Checklist Organizer for Research and Exploration), designed to support astronauts during procedures onboard the International Space Station (ISS), the Lunar Gateway station, and beyond. We reflect on the importance of a reliable and flexible assistant capable of offline operation and highlight the usefulness of audiovisual interaction using augmented reality elements to intuitively display checklist information. We argue that current approaches to the design of IPAs in space operations fall short of meeting these criteria. Therefore, we propose CORE as an assistant that combines Knowledge Graphs (KGs), Retrieval-Augmented Generation (RAG) for a Generative Pre-Trained Transformer (GPT), and Augmented Reality (AR) elements to ensure an intuitive understanding of procedure steps, reliability, offline availability, and flexibility in terms of response style and procedure updates.

cs.AI↗

arXiv2024

Robust State Estimation from Partial Out-Core Measurements with Shallow Recurrent Decoder for Nuclear Reactors

Reliable, real-time state estimation in nuclear reactors is of critical importance for monitoring, control and safety. It further empowers the development of digital twins that are sufficiently accurate for real-world deployment. As nuclear engineering systems are typically characterised by extreme environments, their in-core sensing is a challenging task, even more so in Generation-IV reactor concepts, which feature molten salt or liquid metals as thermal carriers. The emergence of data-driven methods allows for new techniques for accurate and robust estimation of the full state space vector characterising the reactor (mainly composed by neutron fluxes and the thermal-hydraulics fields). These techniques can combine different sources of information, including computational proxy models and local noisy measurements on the system, in order to robustly estimate the state. This work leverages the Shallow Recurrent Decoder (SHRED) architecture to estimate the entire state vector of a reactor from three, out-of-core time-series neutron flux measurements alone. Specifically, the Molten Salt Fast Reactor, in the EVOL geometry (Evaluation and Viability of Liquid Fuel Fast Reactor System project), is demonstrated as a test case, with neutron flux measurements alone allowing for reconstruction of the 20 coupled field variables of the dynamics. This approach can further quantify the uncertainty associated with the state estimation due to its considerably low training cost on compressed data. The accurate reconstruction of every characteristic field in real-time makes this approach suitable for monitoring and control purposes in the framework of a reactor digital twin.

physics.ins-det↗

arXiv2024

Machine Learning in Viscoelastic Fluids via Energy-Based Kernel Embedding

The ability to measure differences in collected data is of fundamental importance for quantitative science and machine learning, motivating the establishment of metrics grounded in physical principles. In this study, we focus on the development of such metrics for viscoelastic fluid flows governed by a large class of linear and nonlinear stress models. To do this, we introduce a kernel function corresponding to a given viscoelastic stress model that implicitly embeds flowfield snapshots into a Reproducing Kernel Hilbert Space (RKHS) whose squared norm equals the total mechanical energy. Working implicitly with lifted representations in the RKHS via the kernel function provides natural and unambiguous metrics for distances and angles between flowfields without the need for hyperparameter tuning. Additionally, we present a solution to the preimage problem for our kernels, enabling accurate reconstruction of flowfields from their RKHS representations. Through numerical experiments on an unsteady viscoelastic lid-driven cavity flow, we demonstrate the utility of our kernels for extracting energetically-dominant coherent structures in viscoelastic flows across a range of Reynolds and Weissenberg numbers. Specifically, the features extracted by Kernel Principal Component Analysis (KPCA) of flowfield snapshots using our kernel functions yield reconstructions with superior accuracy in terms of mechanical energy compared to conventional methods such as ordinary Principal Component Analysis (PCA) with naïvely-defined state vectors or KPCA with ad-hoc choices of kernel functions. Our findings underscore the importance of principled choices of metrics in both scientific and machine learning investigations of complex fluid systems.

physics.flu-dyn↗

arXiv2024

Automating the Practice of Science -- Opportunities, Challenges, and Implications

Automation transformed various aspects of our human civilization, revolutionizing industries and streamlining processes. In the domain of scientific inquiry, automated approaches emerged as powerful tools, holding promise for accelerating discovery, enhancing reproducibility, and overcoming the traditional impediments to scientific progress. This article evaluates the scope of automation within scientific practice and assesses recent approaches. Furthermore, it discusses different perspectives to the following questions: Where do the greatest opportunities lie for automation in scientific practice?; What are the current bottlenecks of automating scientific practice?; and What are significant ethical and practical consequences of automating scientific practice? By discussing the motivations behind automated science, analyzing the hurdles encountered, and examining its implications, this article invites researchers, policymakers, and stakeholders to navigate the rapidly evolving frontier of automated scientific practice.

cs.CY↗

arXiv2024

Long Sequence Decoder Network for Mobile Sensing

The reconstruction and estimation of spatio-temporal patterns poses significant challenges when sensor measurements are limited. The use of mobile sensors adds additional complexity due to the change in sensor locations over time. In such cases, historical measurement and sensor information are useful for better performance, including models such as Kalman filters, recurrent neural networks (RNNs) or transformer models. However, many of these approaches often fail to efficiently handle long sequences of data in such scenarios and are sensitive to noise. In this paper, we consider a model-free approach using the {\em structured state space sequence} (S4D) model as a deep learning layer in traditional sequence models to learn a better representation of historical sensor data. Specifically, it is integrated with a shallow decoder network for reconstruction of the high-dimensional state space. We also introduce a novel initialization of the S4D model using a Butterworth filter design to reduce noise in the inputs. Consequently, we construct a robust S4D (rS4D) model by appending the filtering S4D layer before the original S4D structure. This robust variant enhances the capability to accurately reconstruct spatio-temporal patterns with noisy mobile sensor measurements in long sequence. Numerical experiments demonstrate that our model achieves better performance compared with previous approaches. Our results underscore the efficacy of leveraging state space models within the context of spatio-temporal data reconstruction and estimation using limited mobile sensor resources, particularly in terms of long-sequence dependency and robustness to noise.

math.DS↗

arXiv2024

Sensing with shallow recurrent decoder networks

Sensing is a universal task in science and engineering. Downstream tasks from sensing include inferring full state estimates of a system (system identification), control decisions, and forecasting. These tasks are exceptionally challenging to achieve with limited sensors, noisy measurements, and corrupt or missing data. We propose a SHallow REcurrent Decoder (SHRED) neural network structure for sensing which incorporates (i) a recurrent neural network (LSTM) to learn a latent representation of the temporal dynamics of the sensors, and (ii) a shallow decoder that learns a mapping between this latent representation and the high-dimensional state space. By explicitly accounting for the time-history, or trajectory, of the sensor measurements, SHRED enables accurate reconstructions with far fewer sensors, outperforms existing techniques when more measurements are available, and is agnostic towards sensor placement. In addition, a compressed representation of the high-dimensional state is directly obtained from sensor measurements, which provides an on-the-fly compression for modeling physical and engineering systems. Forecasting is also achieved from the sensor time-series data alone, producing an efficient paradigm for predicting temporal evolution with an exceptionally limited number of sensors. In the example cases explored, including turbulent flows, complex spatio-temporal dynamics can be characterized with exceedingly limited sensors that can be randomly placed with minimal loss of performance.

math.DS↗

arXiv2024

Shallow Recurrent Decoder for Reduced Order Modeling of Plasma Dynamics

Reduced order models are becoming increasingly important for rendering complex and multiscale spatio-temporal dynamics computationally tractable. The computational efficiency of such surrogate models is especially important for design, exhaustive exploration and physical understanding. Plasma simulations, in particular those applied to the study of ${\bf E}\times {\bf B}$ plasma discharges and technologies, such as Hall thrusters, require substantial computational resources in order to resolve the multidimentional dynamics that span across wide spatial and temporal scales. Although high-fidelity computational tools are available to simulate such systems over limited conditions and in highly simplified geometries, simulations of full-size systems and/or extensive parametric studies over many geometric configurations and under different physical conditions are computationally intractable with conventional numerical tools. Thus, scientific studies and industrially oriented modeling of plasma systems, including the important ${\bf E}\times {\bf B}$ technologies, stand to significantly benefit from reduced order modeling algorithms. We develop a model reduction scheme based upon a {\em Shallow REcurrent Decoder} (SHRED) architecture. The scheme uses a neural network for encoding limited sensor measurements in time (sequence-to-sequence encoding) to full state-space reconstructions via a decoder network. Based upon the theory of separation of variables, the SHRED architecture is capable of (i) reconstructing full spatio-temporal fields with as little as three point sensors, even the fields that are not measured with sensor feeds but that are in dynamic coupling with the measured field, and (ii) forecasting the future state of the system using neural network roll-outs from the trained time encoding model.

physics.plasm-ph↗

arXiv2024

Optimized Dynamic Mode Decomposition for Reconstruction and Forecasting of Atmospheric Chemistry Data

We introduce the optimized dynamic mode decomposition algorithm for constructing an adaptive and computationally efficient reduced order model and forecasting tool for global atmospheric chemistry dynamics. By exploiting a low-dimensional set of global spatio-temporal modes, interpretable characterizations of the underlying spatial and temporal scales can be computed. Forecasting is also achieved with a linear model that uses a linear superposition of the dominant spatio-temporal features. The DMD method is demonstrated on three months of global chemistry dynamics data, showing its significant performance in computational speed and interpretability. We show that the presented decomposition method successfully extracts known major features of atmospheric chemistry, such as summertime surface pollution and biomass burning activities. Moreover, the DMD algorithm allows for rapid reconstruction of the underlying linear model, which can then easily accommodate non-stationary data and changes in the dynamics.

cs.LG↗

arXiv2024

Data-driven local operator finding for reduced-order modelling of plasma systems: I. Concept and verifications

Reduced-order plasma models that can efficiently predict plasma behavior across various settings and configurations are highly sought after yet elusive. The demand for such models has surged in the past decade due to their potential to facilitate scientific research and expedite the development of plasma technologies. In line with the advancements in computational power and data-driven methods, we introduce the "Phi Method" in this two-part article. Part I presents this novel algorithm, which employs constrained regression on a candidate term library informed by numerical discretization schemes to discover discretized systems of differential equations. We demonstrate Phi Method's efficacy in deriving reliable and robust reduced-order models (ROMs) for three test cases: the Lorenz attractor, flow past a cylinder, and a 1D Hall-thruster-representative plasma. Part II will delve into the method's application for parametric dynamics discovery. Our results show that ROMs derived from the Phi Method provide remarkably accurate predictions of systems' behavior, whether derived from steady-state or transient-state data. This underscores the method's potential for transforming plasma system modeling.

physics.plasm-ph↗

arXiv2024

Data-driven local operator finding for reduced-order modelling of plasma systems: II. Application to parametric dynamics

Real-world systems often exhibit dynamics influenced by various parameters, either inherent or externally controllable, necessitating models capable of reliably capturing these parametric behaviors. Plasma technologies exemplify such systems. For example, phenomena governing global dynamics in Hall thrusters (a spacecraft propulsion technology) vary with various parameters, such as the "self-sustained electric field". In this Part II, following on the introduction of our novel data-driven local operator finding algorithm, Phi Method, in Part I, we showcase the method's effectiveness in learning parametric dynamics to predict system behavior across unseen parameter spaces. We present two adaptations: the "parametric Phi Method" and the "ensemble Phi Method", which are demonstrated through 2D fluid-flow-past-a-cylinder and 1D Hall-thruster-plasma-discharge problems. Comparative evaluation against parametric OPT-DMD in the fluid case demonstrates superior predictive performance of the parametric Phi Method. Across both test cases, parametric and ensemble Phi Method reliably recover governing parametric PDEs and offer accurate predictions over test parameters. Ensemble ROM analysis underscores Phi Method's robust learning of dominant dynamic coefficients with high confidence.

physics.plasm-ph↗

arXiv2024

Motif distribution and function of sparse deep neural networks

We characterize the connectivity structure of feed-forward, deep neural networks (DNNs) using network motif theory. To address whether a particular motif distribution is characteristic of the training task, or function of the DNN, we compare the connectivity structure of 350 DNNs trained to simulate a bio-mechanical flight control system with different randomly initialized parameters. We develop and implement algorithms for counting second- and third-order motifs and calculate their significance using their Z-score. The DNNs are trained to solve the inverse problem of the flight dynamics model in Bustamante, et al. (2022) (i.e., predict the controls necessary for controlled flight from the initial and final state-space inputs) and are sparsified through an iterative pruning and retraining algorithm Zahn, et al. (2022). We show that, despite random initialization of network parameters, enforced sparsity causes DNNs to converge to similar connectivity patterns as characterized by their motif distributions. The results suggest how neural network function can be encoded in motif distributions, suggesting a variety of experiments for informing function and control.

cs.LG↗

arXiv2024

Multi-Hierarchical Surrogate Learning for Structural Dynamical Crash Simulations Using Graph Convolutional Neural Networks

Crash simulations play an essential role in improving vehicle safety, design optimization, and injury risk estimation. Unfortunately, numerical solutions of such problems using state-of-the-art high-fidelity models require significant computational effort. Conventional data-driven surrogate modeling approaches create low-dimensional embeddings for evolving the dynamics in order to circumvent this computational effort. Most approaches directly operate on high-resolution data obtained from numerical discretization, which is both costly and complicated for mapping the flow of information over large spatial distances. Furthermore, working with a fixed resolution prevents the adaptation of surrogate models to environments with variable computing capacities, different visualization resolutions, and different accuracy requirements. We thus propose a multi-hierarchical framework for structurally creating a series of surrogate models for a kart frame, which is a good proxy for industrial-relevant crash simulations, at different levels of resolution. For multiscale phenomena, macroscale features are captured on a coarse surrogate, whereas microscale effects are resolved by finer ones. The learned behavior of the individual surrogates is passed from coarse to finer levels through transfer learning. In detail, we perform a mesh simplification on the kart model to obtain multi-resolution representations of it. We then train a graph-convolutional neural network-based surrogate that learns parameter-dependent low-dimensional latent dynamics on the coarsest representation. Subsequently, another, similarly structured surrogate is trained on the residual of the first surrogate using a finer resolution. This step can be repeated multiple times. By doing so, we construct multiple surrogates for the same system with varying hardware requirements and increasing accuracy.

cs.LG↗

arXiv2024

PyDMD: A Python package for robust dynamic mode decomposition

The dynamic mode decomposition (DMD) is a simple and powerful data-driven modeling technique that is capable of revealing coherent spatiotemporal patterns from data. The method's linear algebra-based formulation additionally allows for a variety of optimizations and extensions that make the algorithm practical and viable for real-world data analysis. As a result, DMD has grown to become a leading method for dynamical system analysis across multiple scientific disciplines. PyDMD is a Python package that implements DMD and several of its major variants. In this work, we expand the PyDMD package to include a number of cutting-edge DMD methods and tools specifically designed to handle dynamics that are noisy, multiscale, parameterized, prohibitively high-dimensional, or even strongly nonlinear. We provide a complete overview of the features available in PyDMD as of version 1.0, along with a brief overview of the theory behind the DMD algorithm, information for developers, tips regarding practical DMD usage, and introductory coding examples. All code is available at https://github.com/PyDMD/PyDMD .

stat.CO↗

arXiv2023

Nonlinear parametric models of viscoelastic fluid flows

Reduced-order models have been widely adopted in fluid mechanics, particularly in the context of Newtonian fluid flows. These models offer the ability to predict complex dynamics, such as instabilities and oscillations, at a considerably reduced computational cost. In contrast, the reduced-order modeling of non-Newtonian viscoelastic fluid flows remains relatively unexplored. This work leverages the sparse identification of nonlinear dynamics algorithm to develop interpretable reduced-order models for viscoelastic flows. In particular, we explore a benchmark oscillatory viscoelastic flow on the four-roll mill geometry using the classical Oldroyd-B fluid. This flow exemplifies many canonical challenges associated with non-Newtonian flows, including transitions, asymmetries, instabilities, and bifurcations arising from the interplay of viscous and elastic forces, all of which require expensive computations in order to resolve the fast timescales and long transients characteristic of such flows. First, we demonstrate the effectiveness of our data-driven surrogate model to predict the transient evolution and accurately reconstruct the spatial flow field for fixed flow parameters. We then develop a fully parametric, nonlinear model capable of capturing the dynamic variations as a function of the Weissenberg number. While the training data is predominantly concentrated on a limit cycle regime for moderate Wi, we show that the parameterized model can be used to extrapolate, accurately predicting the dominant dynamics in the case of high Weissenberg numbers. The proposed methodology represents an initial step in the field of reduced-order modeling for viscoelastic flows with the potential to be further refined and enhanced for the design, optimization, and control of a wide range of non-Newtonian fluid flows using machine learning and reduced-order modeling techniques.

physics.flu-dyn↗