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Jie Peng

Publications and source records attributed to Jie Peng.

At least 19 recordsLinked to original sources

WorldProbe: When Video World Models Fall Apart under Long-Horizon Spatial Exploration

Video world models generate future visual observations from camera or action inputs, with the goal of synthesizing persistent 3D worlds that can be explored across time and space. Existing benchmarks typically evaluate short interactions or rely on camera trajectories fixed before generation. The performance of video world models under long-horizon exploration with extensive camera motion remains under-explored. We introduce WorldProbe, a diagnostic benchmark that uses a goal-conditioned multimodal agent to adapt camera actions online during generation. WorldProbe comprises 164 test cases across four probing families. Across 10 state-of-the-art models, we generate more than 1,600 rollouts totaling approximately 800 minutes, with horizons up to 180 seconds. Our evaluation across four dimensions reveals both the degradation of local measures and the emergence of long-range inconsistencies. We find that recent models sustain visual and content quality for longer, while long-range memory and evolution remain weak. These results expose a gap between locally stable generation and persistent world consistency that is largely missed by existing benchmarks. Code and benchmark resources are available at https://github.com/Untitled-W/WorldProbe.

cs.CV↗

Ensemble-Aware Structural Encoding (EASE): Conditioning Protein Encoders on Peptide Conformational Ensembles

Protein foundation models provide transferable representations for downstream peptide prediction tasks. However, existing representations typically reduce a peptide to a single sequence or structure, which may miss conformational variability relevant to key peptide properties, including antibacterial activity, hemolysis, toxicity, stability, and binding. For example, protease resistance correlates more strongly with conformational dynamics measured by hydrogen exchange than with average helicity. Therefore, we introduce Ensemble-Aware Structural Encoding (EASE), a framework for effectively extracting structural information from conformational ensembles for peptide representation. To extract useful information from noisy conformers, EASE selects central conformers representing a peptide's major structural states and fuses their individual representations with a permutation-invariant operator to produce a peptide-level representation for downstream prediction. We then evaluate our framework on six peptide property-prediction tasks under leakage-controlled splits. Against matched single-structure baselines, EASE improves performance consistently on six tasks with a mean absolute gain of about 3.0% across two structural encoders. Gains keep growing as we add conformers through K=20. A single peptide conformer therefore provides a limited basis for structural representation, whereas our framework distilling and fusing multiple conformers yields a more informative representation.

cs.LG↗

UDL-RT: A unified differentiable all-sky microwave radiative transfer model with learnable parameterizations

Radiance-based retrievals and data assimilation require radiative transfer models (RTMs) to simulate radiances and quantify their sensitivities to atmospheric and surface conditions. Conventional RTMs often rely on separately maintained forward, tangent-linear, and adjoint codes, complicating model development and extension. Here, we present the Unified Differentiable and Learnable Radiative Transfer model (UDL-RT), a PyTorch-based framework for all-sky microwave radiative transfer that couples neural-network (NN) parameterizations of gaseous absorption, hydrometeor bulk scattering properties (BSPs), and ocean surface emissivity with an explicit radiative transfer solver in a unified differentiable computational graph. Automatic differentiation directly computes Jacobians with respect to input variables, reducing the model maintenance burden. The NN parameterizations offer flexible representations of complex nonlinear relationships. For example, the NN gas-absorption parameterization reduces the standard deviation of brightness-temperature (TB) errors by approximately 60-85% in the water-vapour channels compared with linear regression. Moreover, UDL-RT propagates loss gradients to trainable parameters to optimize physical parameterizations against observations, with GPU-accelerated batched computation supporting efficient iterative learning. Using Microwave Humidity Sounder-2 (MWHS-2) observations, we optimize the snow BSP parameterization through gradient-based learning. The optimized parameterization improves agreement between simulated and observed TB distributions and reduces the systematic bias and skewness of observation-minus-background (O-B) departures. Overall, UDL-RT integrates radiance simulation, sensitivity analysis, and parameterization optimization within a unified framework, supporting future remote sensing retrieval and data assimilation applications.

physics.ao-ph↗

PatientWM: Towards Generalizable Clinical World Models via Unified Patient States

Clinical decisions depend on anticipating how a patient's condition will evolve as treatment is adjusted and new evidence becomes available. Existing medical world models capture patient-state evolution, but often define the evolving state around a particular modality or task, limiting reuse as inputs or prediction targets change. These models also retain history through observation sequences or recurrent or latent summaries rather than exposing preceding patient states and clinical actions as an ordered transition context. This distinction matters because similar current measurements may follow different recent changes, treatment exposures, and observed responses. To tackle these limitations, we propose PatientWM, a clinical world-model framework built around a unified patient state and sequential latent history. Availability-aware encoders integrate observations available at each decision time into the patient state, while typed decoders produce task-specific clinical readouts without defining the state around any single target. PatientWM further conditions each next-state prediction on the current state and supplied action together with a bounded, ordered history of preceding latent patient states and clinical actions, preserving recent treatment and response context. Experiments across MIMIC-III, MIMIC-IV, and three external clinical datasets show superior performance in clinical prediction, multi-step forecasting, and action-planning evaluation. Transfer experiments further demonstrate the generalizability of PatientWM's patient state. Together, these results establish its ability to forecast clinical evolution and support planning.

cs.AI↗

Cross-Modal Latent Influence: Patch-Level Training Sample Attribution for Vision-Language Models

Explaining a vision--language model (VLM) prediction requires tracing training-example influence to the multimodal evidence that mediates it, yet existing attribution methods largely operate only at the sample level. Recent latent-mediated influence methods provide feature-level attribution in language models, but lack the multimodal and spatial structure needed to ground influence in VLMs. We introduce MOSAIC (Multimodal Orthogonalized Sparse Autoencoders for Influence Characterization). It learns a shared sparse image--text latent space whose concepts are 1) sparse within each modality, 2) supported on contiguous image regions, 3) aligned to the phrases that describe them, and 4) approximately decorrelated. It then applies EK-FAC to decompose training-example influence through these concepts and localize their contributions to specific text phrases and image regions. We evaluate MOSAIC on Qwen and Gemma across captioning, chest X-ray understanding, and visual question answering. The learned features are more localized and coherent without degrading task behavior, and ablating influence-ranked latents changes model outputs more than ablating latents ranked by activation or frequency. We find that visual evidence can substantially reorganize training-data attribution while preserving more of the shared latent structure. MOSAIC thus connects where model behavior comes from with what multimodal evidence carries that influence.

cs.AI↗

AutoAdapt: Reliable Few-Shot Adaptation under Clinical Distribution Shifts

Large pretrained clinical models provide a practical way to reuse learned prior knowledge across hospitals by adapting models to them. In practice, a target hospital may only have a small labeled patient cohort, a setting commonly referred to as few-shot adaptation. This requires making multiple decisions, such as which pretrained model to adapt, how much of the model to update, and which patients to use. Nevertheless, this process faces two primary challenges. First, the best adaptation strategy varies across clinical tasks. Second, evaluating and comparing candidate strategies becomes unreliable due to the small patient cohort. In this work, we introduce AutoAdapt with two core designs to deal with these challenges. The Adapter defines an extensible space of adaptation recipes, and the Automator forms a weighted recipe combination from evidence within the adaptation patients. We propose a reliability rule to ensure that only the most effective strategy on most available patients will be selected. These selected strategies then form a combination for effective few-shot adaptation. We conduct extensive experiments across critical care, emergency care, and diagnostic datasets, and the results show that AutoAdapt consistently achieves state-of-the-art performance using only a few patients for adaptation.

cs.CV↗

Training and Scaling Compute-Optimal Physiological Waveform Foundation Models

We investigate the scaling laws and compute-optimal training of physiological waveform foundation models (FMs). We train Aether, a family of over one hundred FMs ranging from 20M to 2.1B parameters, on up to 36.3M hours of physiological waveforms. We construct eight clinical prediction tasks from MIMIC-III and evaluate the FMs through linear probing. The 720M FM outperforms all existing baseline FMs across all eight tasks. A scaling law of model size, pretraining hours, and labeled patients predicts downstream ranking error, i.e. $1-\mathrm{AUROC}$, effectively with $0.5\%$ prediction MAE at held-out resource scales and $0.9\%$ MAE when extrapolating to 2.1B parameters. We present three findings: (1) Compute-optimal training scales both FM size and pretraining hours. Under the fitted law, a $10.0\times$ increase in compute FLOPs scales model size by $1.2\times$ and pretraining hours by $8.2\times$. (2) Larger FMs use waveform data more efficiently, and greater pretraining exposure increases the benefit of model scaling. Starting from 25M parameters and 4.8M pretraining hours, doubling FM size reduces the predicted hours needed for the same performance by $51.8\%$. (3) Pretraining and clinical supervision reinforce each other: more labeled patients increase the return to pretraining, while larger FMs and longer pretraining reduce labeling requirements. For the example of the 720M FM, extending pretraining from 120K to 36.3M hours reduces the predicted patient requirement by $61\%$ at a target ranking error. These findings provide a quantitative training recipe and a promising and durable scaling path for physiological waveform modeling and downstream clinical prediction.

cs.LG↗

AdaHVLA: Adaptive Harnesses for Long-Horizon Vision-Language-Action Execution

Vision-language-action (VLA) models offer strong local control and instruction following but often struggle with long-horizon tasks requiring persistent memory and planning. Task harnesses provide persistent context for agent reasoning by retaining task history and tracking progress across execution stages. To bring these complementary capabilities together, we introduce AdaHVLA, an adaptive harness that refines code-based coordination policies through robot experience to better align agent reasoning and memory with VLA execution. Its decoupled multiagent adaptation process separates evidence analysis, harness revision, and behavioral assessment into distinct working contexts, using testable coordination hypotheses to guide revisions and subsequent rollouts to assess their predicted effects. A stateful revision graph links execution evidence, hypotheses, revisions, and observed effects, preserving alternative harnesses and adaptation memory to guide refinement across repeated attempts and continued adaptation across tasks and environments. In simulation, AdaHVLA raises mean test success on NaVILA-LH from 22.5\% to as high as 57.5\% and improves manipulation test success across three VLA backbones by up to 30.8 percentage points over the initial harness. Real-world deployment further illustrates how the adapted policies support stable execution across task stages.

cs.RO↗

M2G-LLM: Enhancing Clinical Prediction via Multimodal Graph Reasoning and LLM Context Injection

Integrating diverse data modalities --- such as clinical notes, laboratory results, and medical imaging --- is essential for advancing clinical decision-making. While Large Language Models (LLMs) have shown remarkable performance in processing unstructured clinical text, their limited capacity to incorporate non-text modalities hinders their broader utility in healthcare applications. Here, we introduce M2G-LLM (Multimodal MedGraph-LLM), a novel framework that enhances LLMs with multimodal integration and alignment via Graph Neural Networks (GNNs). Our approach models temporal relationships between patient visits, propagates information across clinically similar patients, and aligns heterogeneous data sources to construct enriched multimodal context vectors. These vectors are injected into the intermediate layers of the LLM, enabling joint reasoning over textual and non-textual modalities. We evaluate M2G-LLM on the MIMIC-IV and MIMIC-CXR datasets, demonstrating improvements in clinical prediction tasks over strong baseline models. Our results highlight the promise of combining the language understanding of LLMs with the relational reasoning capabilities of GNNs for comprehensive, multimodal healthcare analysis.

cs.LG↗

Bridging Language and Physics: Automated Design of Continuum Robots with Large Language Models

Large language models (LLMs) have recently emerged as a promising tool for automating robot design from high-level specifications, yet they remain ineffective for robots operating under complex physical interactions. This limitation stems from the gap between language-based reasoning and the physical consequences of embodiment, often resulting in designs with low physical validity. In this work, we propose a multi-layered framework, AID-SR, that establishes a closed loop by translating simulator-observed physical states into structured feedback for the LLM designer. Combined with semantic critique, human feedback, and iterative refinement, the framework promotes the generation of physically feasible and functionally meaningful robot designs. We evaluate our approach on tendon-driven continuum robots across a benchmark of 14 tasks spanning reaching, grasping, locomotion, and manipulation. The proposed framework achieves 96.2% rate for passing the simulation feasibility check and by applying a common reinforcement learning training, 26.7% robots can successfully fulfill the corresponding task. We then fabricate three designed robots of AID-SR that successfully complete the task in real-world. These extensive experiments across simulation and real-world environments demonstrate and break the wall of utilizing the LLMs for automated design of continuum robots. The source code and experimental resources are publicly available at https://github.com/UNITES-Lab/AID-SR.

cs.RO↗

From Leakage to Fidelity: Reliable Benchmarking for Temporal Cascade Prediction

Temporal cascade prediction is widely studied, yet its empirical foundations remain fragile. Most existing works report results under random cascade splits that mix past and future signals, rely on datasets with limited features and no downstream conversion labels, and compare increasingly complex models without systematically examining whether benchmark conclusions are protocol-dependent. This paper argues that the field should move from leakage-prone evaluation toward fidelity-aware benchmarking. We introduce a protocol suite and renewed evaluation standard for temporal cascade prediction, centered on the Full Temporal protocol, overlap-based leakage diagnostics, and analyses of performance inflation and temporal drift. To broaden the scope of benchmark tasks, we also present Taoke, a real-world e-commerce cascade dataset with rich promoter/product features and observed purchase conversions, enabling both first-stage popularity forecasting and second-stage conversion forecasting under a shared benchmark asset. Finally, we include CasTemp as a lightweight reference method and additionally probe a larger same-task internal extension to verify that this pipeline remains operational at substantially greater scale. Together, these components turn cascade prediction from a protocol-sensitive leaderboard exercise into a more reliable analysis and benchmarking problem, while still providing a practical reference pipeline for large-scale evaluation and conversion-aware modeling.

cs.LG↗

CAST: Context- and Anomaly Structure-Conditioned Time Series Anomaly Generation

Anomalous time series play a critical role in safety-critical domains, yet they are inherently scarce, heterogeneous, and costly to obtain. Existing time series generation methods predominantly focus on synthesizing normal data, providing limited value when anomalous samples are needed. We identify two fundamental challenges in anomaly generation: (i) the scarcity of anomaly data, and (ii) the heterogeneous morphological characteristics of anomalies. To address these challenges, we propose CAST, a Context- and Anomaly Structure-conditioned Time series anomaly generation framework with principled two-stage pretraining and finetuning strategy. In pretraining stage, we leverage abundant normal time series data to learn underlying system dynamics and substantially mitigate the limited availability of anomaly data. During finetuning, CAST explicitly conditions the generator on learned anomaly structure representations, enabling it to capture heterogeneous anomaly morphologies under similar contextual conditions. Extensive experiments on multiple real-world univariate and multivariate datasets demonstrate that CAST consistently outperforms state-of-the-art anomaly generation methods in terms of both generation fidelity and downstream task utility, highlighting the effectiveness of the proposed approach.

cs.LG↗

HarnessRisk: A Lifecycle-Oriented Benchmark for Agent Harness Safety

Large language models are increasingly deployed through agent harnesses that manage tools, extensions, persistent state, permissions, and external actions. Existing safety benchmarks mainly target individual attack mechanisms or a limited subset of operational settings, making it difficult to compare how safety failures emerge across different harness responsibilities. We present HarnessRisk, a lifecycle oriented benchmark that organizes agent harness safety into six operational phases including Harness Configuration, Capability Extension, Runtime Operation, State Persistence, Action Control, and Incident Recovery. HarnessRisk contains 128 sandboxed cases, each pairing a benign user objective with an adversarial instruction embedded in an untrusted workflow artifact. We evaluate each trajectory using Utility, Attack Success Rate, Persistence, and Detection. Across three harnesses, six language models, and 14 model and harness configurations, attack success ranges from 12.6% to 80.9%, while Utility remains between 75.0% and 97.6%. Harness Configuration is the most vulnerable phase across all three harnesses, showing that attacks can succeed by altering security sensitive parameters within otherwise authorized workflows. We also find that explicit risk recognition does not reliably lead to safe action, as some configurations detect risks in more than 90% of runs while retaining substantial attack success. These results highlight the need to evaluate agent safety across multiple harness responsibilities and at the level of the deployed model and harness configuration.

cs.CR↗

Nonlinear Fourier spectral signatures of rogue waves observed in Bose-Einstein condensates

Modulation instability provides an important framework for understanding rogue wave (RW) formation on continuous backgrounds. However, the formation mechanism and nonlinear spectral structures of RWs in Bose-Einstein condensate (BEC) matter-wave systems with vanishing boundary conditions remain largely unexplored. Here, we employ the nonlinear Fourier transform (NFT), based on the integrable structure of the focusing nonlinear Schrödinger equation and the Zakharov-Shabat scattering problem, to investigate two representative classes of first-order RWs in BEC systems. Through nonlinear spectral analysis and Darboux reconstruction, we demonstrate that both Gaussian-wave-packet-induced extreme localization events and experimentally observed Peregrine solitons are governed by the coherent dynamics of discrete soliton modes encoded in the nonlinear spectrum. For Gaussian initial states, increasing the initial width leads to an increasing number of discrete eigenvalues, resulting in a transition from fundamental solitons and bound states to Christmas-tree-like RW structures. For experimentally observed Peregrine solitons, localized perturbations reshape the discrete spectral configuration and phase evolution, enabling coherent focusing of multiple bound soliton modes. Furthermore, we reveal the spectral mechanism of higher-order RWs and propose an inverse spectral-engineering approach based on discrete-spectrum phase matching. Our results provide a nonlinear spectral perspective for understanding and controlling RW formation in matter-wave systems with vanishing boundary conditions.

nlin.PS↗

Can Generative Recommendation Reach Cold Items? A Temporal Perspective on Semantic-ID Generation

Semantic-ID-based generative recommendation represents items as sequences of shared semantic tokens, enabling token recombination beyond isolated item IDs. However, closed-world recombination does not necessarily imply temporal open-token cold-start induction, where new items enter the item catalog with unseen atomic tokens or weakly supported SID paths. In this work, we revisit SID-based generative recommendation under an absolute-time temporal protocol that separates seen and unseen targets and diagnoses the cold item reachability at the token level. Through seen/unseen-hit analysis, coldness taxonomy, and oracle-prefix probing, we show that current SID-based models can occasionally reach future items supported by observed tokens and prefixes, but struggle with unseen atomic tokens and unsupported SID paths. We further explain this boundary by interpreting SID generation as hierarchical semantic bucketing: early tokens select coarse semantic regions, while later tokens refine item-specific paths. These findings show that SID generation is compositional but not fully open-ended, and suggest future directions in more independent SID spaces, scoring-based interfaces, and dynamic textual context.

cs.AI↗

A Replicate-and-Quantize Strategy for Plug-and-Play Load Balancing of Sparse Mixture-of-Experts LLMs

Sparse Mixture-of-Experts (SMoE) architectures are increasingly used to scale large language models efficiently, delivering strong accuracy under fixed compute budgets. However, SMoE models often suffer from severe load imbalance across experts, where a small subset of experts receives most tokens while others are underutilized. Prior work has focused mainly on training-time solutions such as routing regularization or auxiliary losses, leaving inference-time behavior, which is critical for deployment, less explored. We present a systematic analysis of expert routing during inference and identify three findings: (i) load imbalance persists and worsens with larger batch sizes, (ii) selection frequency does not reliably reflect expert importance, and (iii) overall expert workload and importance can be estimated using a small calibration set. These insights motivate inference-time mechanisms that rebalance workloads without retraining or router modification. We propose Replicate-and-Quantize (R&Q), a training-free and near-lossless framework for dynamic workload rebalancing. In each layer, heavy-hitter experts are replicated to increase parallel capacity, while less critical experts and replicas are quantized to remain within the original memory budget. We also introduce a Load-Imbalance Score (LIS) to measure routing skew by comparing heavy-hitter load to an equal allocation baseline. Experiments across representative SMoE models and benchmarks show up to 1.4x reduction in imbalance with accuracy maintained within +/-0.6%, enabling more predictable and efficient inference.

cs.LG↗

AnyDesign: Versatile Area Fashion Editing via Mask-Free Diffusion

Fashion image editing aims to modify a person's appearance based on a given instruction. Existing methods require auxiliary tools like segmenters and keypoint extractors, lacking a flexible and unified framework. Moreover, these methods are limited in the variety of clothing types they can handle, as most datasets focus on people in clean backgrounds and only include generic garments such as tops, pants, and dresses. These limitations restrict their applicability in real-world scenarios. In this paper, we first extend an existing dataset for human generation to include a wider range of apparel and more complex backgrounds. This extended dataset features people wearing diverse items such as tops, pants, dresses, skirts, headwear, scarves, shoes, socks, and bags. Additionally, we propose AnyDesign, a diffusion-based method that enables mask-free editing on versatile areas. Users can simply input a human image along with a corresponding prompt in either text or image format. Our approach incorporates Fashion DiT, equipped with a Fashion-Guidance Attention (FGA) module designed to fuse explicit apparel types and CLIP-encoded apparel features. Both Qualitative and quantitative experiments demonstrate that our method delivers high-quality fashion editing and outperforms contemporary text-guided fashion editing methods.

cs.CV↗

Ontology-Guided Evidence Path Inference for Multi-hop Knowledge Graph Question Answering

Knowledge graph question answering (KGQA) aims to answer natural-language questions by reasoning over structured facts. Existing multi-hop KGQA methods mainly rely on topic-centered expansion, which faces two key challenges: the search space rapidly grows with noisy mixed-type paths, and retrieved paths may fail to satisfy the semantic constraints of complex questions. To address these challenges, we propose OPI, an ontology-guided evidence path inference framework for multi-hop KGQA. OPI introduces a relation-centric ontology graph to capture the head-tail type constraints of relations, providing a compact interface for answer-side constraints. Based on this ontology graph, OPI first introduces a bidirectional retrieval mechanism by mapping the predicted answer type to compatible final-hop relations and combining topic-side prefix expansion with answer-side final-hop matching, thereby suppressing noisy mixed-type expansion. OPI further adopts an iterative refinement strategy to reassess retrieved paths and candidate answers under the question context, filtering type-compatible but question-irrelevant evidence for more reliable answer prediction. Experiments on WebQSP, CWQ, and MetaQA show that OPI substantially reduces the search space, improves Hit@1/F1 by 4.6/5.0 points on WebQSP and 8.9/3.3 points on CWQ over the strongest prior results, and achieves near-saturated Hit@1 on MetaQA with the retrieval module alone.

cs.AI↗