arXiv subjects

Jielin Qiu

Publications and source records attributed to Jielin Qiu.

45 records · Page 3Linked to original sources

arXiv2023

Multimodal Representation Learning of Cardiovascular Magnetic Resonance Imaging

Self-supervised learning is crucial for clinical imaging applications, given the lack of explicit labels in healthcare. However, conventional approaches that rely on precise vision-language alignment are not always feasible in complex clinical imaging modalities, such as cardiac magnetic resonance (CMR). CMR provides a comprehensive visualization of cardiac anatomy, physiology, and microstructure, making it challenging to interpret. Additionally, CMR reports require synthesizing information from sequences of images and different views, resulting in potentially weak alignment between the study and diagnosis report pair. To overcome these challenges, we propose \textbf{CMRformer}, a multimodal learning framework to jointly learn sequences of CMR images and associated cardiologist's reports. Moreover, one of the major obstacles to improving CMR study is the lack of large, publicly available datasets. To bridge this gap, we collected a large \textbf{CMR dataset}, which consists of 13,787 studies from clinical cases. By utilizing our proposed CMRformer and our collected dataset, we achieved remarkable performance in real-world clinical tasks, such as CMR image retrieval and diagnosis report retrieval. Furthermore, the learned representations are evaluated to be practically helpful for downstream applications, such as disease classification. Our work could potentially expedite progress in the CMR study and lead to more accurate and effective diagnosis and treatment.

cs.CV↗

arXiv2023

Cardiac Disease Diagnosis on Imbalanced Electrocardiography Data Through Optimal Transport Augmentation

In this paper, we focus on a new method of data augmentation to solve the data imbalance problem within imbalanced ECG datasets to improve the robustness and accuracy of heart disease detection. By using Optimal Transport, we augment the ECG disease data from normal ECG beats to balance the data among different categories. We build a Multi-Feature Transformer (MF-Transformer) as our classification model, where different features are extracted from both time and frequency domains to diagnose various heart conditions. Learning from 12-lead ECG signals, our model is able to distinguish five categories of cardiac conditions. Our results demonstrate 1) the classification models' ability to make competitive predictions on five ECG categories; 2) improvements in accuracy and robustness reflecting the effectiveness of our data augmentation method.

eess.SP↗

arXiv2023

Transfer Knowledge from Natural Language to Electrocardiography: Can We Detect Cardiovascular Disease Through Language Models?

Recent advancements in Large Language Models (LLMs) have drawn increasing attention since the learned embeddings pretrained on large-scale datasets have shown powerful ability in various downstream applications. However, whether the learned knowledge by LLMs can be transferred to clinical cardiology remains unknown. In this work, we aim to bridge this gap by transferring the knowledge of LLMs to clinical Electrocardiography (ECG). We propose an approach for cardiovascular disease diagnosis and automatic ECG diagnosis report generation. We also introduce an additional loss function by Optimal Transport (OT) to align the distribution between ECG and language embedding. The learned embeddings are evaluated on two downstream tasks: (1) automatic ECG diagnosis report generation, and (2) zero-shot cardiovascular disease detection. Our approach is able to generate high-quality cardiac diagnosis reports and also achieves competitive zero-shot classification performance even compared with supervised baselines, which proves the feasibility of transferring knowledge from LLMs to the cardiac domain.

cs.CL↗

arXiv2022

Group Distributionally Robust Reinforcement Learning with Hierarchical Latent Variables

One key challenge for multi-task Reinforcement learning (RL) in practice is the absence of task indicators. Robust RL has been applied to deal with task ambiguity, but may result in over-conservative policies. To balance the worst-case (robustness) and average performance, we propose Group Distributionally Robust Markov Decision Process (GDR-MDP), a flexible hierarchical MDP formulation that encodes task groups via a latent mixture model. GDR-MDP identifies the optimal policy that maximizes the expected return under the worst-possible qualified belief over task groups within an ambiguity set. We rigorously show that GDR-MDP's hierarchical structure improves distributional robustness by adding regularization to the worst possible outcomes. We then develop deep RL algorithms for GDR-MDP for both value-based and policy-based RL methods. Extensive experiments on Box2D control tasks, MuJoCo benchmarks, and Google football platforms show that our algorithms outperform classic robust training algorithms across diverse environments in terms of robustness under belief uncertainties. Demos are available on our project page (\url{https://sites.google.com/view/gdr-rl/home}).

cs.LG↗

arXiv2022

LiveSeg: Unsupervised Multimodal Temporal Segmentation of Long Livestream Videos

Livestream videos have become a significant part of online learning, where design, digital marketing, creative painting, and other skills are taught by experienced experts in the sessions, making them valuable materials. However, Livestream tutorial videos are usually hours long, recorded, and uploaded to the Internet directly after the live sessions, making it hard for other people to catch up quickly. An outline will be a beneficial solution, which requires the video to be temporally segmented according to topics. In this work, we introduced a large Livestream video dataset named MultiLive, and formulated the temporal segmentation of the long Livestream videos (TSLLV) task. We propose LiveSeg, an unsupervised Livestream video temporal Segmentation solution, which takes advantage of multimodal features from different domains. Our method achieved a $16.8\%$ F1-score performance improvement compared with the state-of-the-art method.

cs.CV↗

arXiv2022

Semantics-Consistent Cross-domain Summarization via Optimal Transport Alignment

Multimedia summarization with multimodal output (MSMO) is a recently explored application in language grounding. It plays an essential role in real-world applications, i.e., automatically generating cover images and titles for news articles or providing introductions to online videos. However, existing methods extract features from the whole video and article and use fusion methods to select the representative one, thus usually ignoring the critical structure and varying semantics. In this work, we propose a Semantics-Consistent Cross-domain Summarization (SCCS) model based on optimal transport alignment with visual and textual segmentation. In specific, our method first decomposes both video and article into segments in order to capture the structural semantics, respectively. Then SCCS follows a cross-domain alignment objective with optimal transport distance, which leverages multimodal interaction to match and select the visual and textual summary. We evaluated our method on three recent multimodal datasets and demonstrated the effectiveness of our method in producing high-quality multimodal summaries.

cs.CV↗

arXiv2022

GeoECG: Data Augmentation via Wasserstein Geodesic Perturbation for Robust Electrocardiogram Prediction

There has been an increased interest in applying deep neural networks to automatically interpret and analyze the 12-lead electrocardiogram (ECG). The current paradigms with machine learning methods are often limited by the amount of labeled data. This phenomenon is particularly problematic for clinically-relevant data, where labeling at scale can be time-consuming and costly in terms of the specialized expertise and human effort required. Moreover, deep learning classifiers may be vulnerable to adversarial examples and perturbations, which could have catastrophic consequences, for example, when applied in the context of medical treatment, clinical trials, or insurance claims. In this paper, we propose a physiologically-inspired data augmentation method to improve performance and increase the robustness of heart disease detection based on ECG signals. We obtain augmented samples by perturbing the data distribution towards other classes along the geodesic in Wasserstein space. To better utilize domain-specific knowledge, we design a ground metric that recognizes the difference between ECG signals based on physiologically determined features. Learning from 12-lead ECG signals, our model is able to distinguish five categories of cardiac conditions. Our results demonstrate improvements in accuracy and robustness, reflecting the effectiveness of our data augmentation method.

stat.ML↗

arXiv2022

MHMS: Multimodal Hierarchical Multimedia Summarization

Multimedia summarization with multimodal output can play an essential role in real-world applications, i.e., automatically generating cover images and titles for news articles or providing introductions to online videos. In this work, we propose a multimodal hierarchical multimedia summarization (MHMS) framework by interacting visual and language domains to generate both video and textual summaries. Our MHMS method contains video and textual segmentation and summarization module, respectively. It formulates a cross-domain alignment objective with optimal transport distance which leverages cross-domain interaction to generate the representative keyframe and textual summary. We evaluated MHMS on three recent multimodal datasets and demonstrated the effectiveness of our method in producing high-quality multimodal summaries.

cs.CV↗

arXiv2021

A Neurally-Inspired Hierarchical Prediction Network for Spatiotemporal Sequence Learning and Prediction

In this paper we developed a hierarchical network model, called Hierarchical Prediction Network (HPNet), to understand how spatiotemporal memories might be learned and encoded in the recurrent circuits in the visual cortical hierarchy for predicting future video frames. This neurally inspired model operates in the analysis-by-synthesis framework. It contains a feed-forward path that computes and encodes spatiotemporal features of successive complexity and a feedback path for the successive levels to project their interpretations to the level below. Within each level, the feed-forward path and the feedback path intersect in a recurrent gated circuit, instantiated in a LSTM module, to generate a prediction or explanation of the incoming signals. The network learns its internal model of the world by minimizing the errors of its prediction of the incoming signals at each level of the hierarchy. We found that hierarchical interaction in the network increases semantic clustering of global movement patterns in the population codes of the units along the hierarchy, even in the earliest module. This facilitates the learning of relationships among movement patterns, yielding state-of-the-art performance in long range video sequence predictions in the benchmark datasets. The network model automatically reproduces a variety of prediction suppression and familiarity suppression neurophysiological phenomena observed in the visual cortex, suggesting that hierarchical prediction might indeed be an important principle for representational learning in the visual cortex.

cs.NE↗