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Jonathan H. Chan

Publications and source records attributed to Jonathan H. Chan.

9 recordsLinked to original sources

A Quantitative Evaluation Framework for Temporal Explainability in Echocardiographic Video Segmentation

Deep learning has achieved state-of-the-art performance in echocardiographic video segmentation, with an increasing number of models incorporating temporal information. However, quantitative evaluation of temporal explainability remains largely unexplored. We propose a quantitative framework for evaluating Grad-CAM explanations using four complementary metrics measuring temporal consistency, saliency motion, anatomical overlap, and temporal overlap. Using EchoNet-Dynamic, we compare a baseline 2D U-Net with ConvLSTM U-Net models trained across multiple temporal strides. While segmentation performance remained comparable across all models, intermediate ConvLSTM explanations exhibited substantially lower saliency consistency and greater centroid motion than final prediction explanations. Temporal Bottleneck explanations were significantly more stable than Encoder Bottleneck explanations across all strides, while final ConvLSTM Decoder3 explanations were broadly comparable to those of the 2D U-Net. Importantly, conventional frame-wise explanation metrics cannot determine whether variation in intermediate explanations reflects meaningful temporal feature evolution or explanation instability. These findings establish a preliminary quantitative framework for temporal explainability and motivate temporal-aware XAI methods that explicitly account for evolving representations in medical video models.

cs.CV

SAMUeL: Efficient Vocal-Conditioned Music Generation via Soft Alignment Attention and Latent Diffusion

We present a lightweight latent diffusion model for vocal-conditioned musical accompaniment generation that addresses critical limitations in existing music AI systems. Our approach introduces a novel soft alignment attention mechanism that adaptively combines local and global temporal dependencies based on diffusion timesteps, enabling efficient capture of multi-scale musical structure. Operating in the compressed latent space of a pre-trained variational autoencoder, the model achieves a 220 times parameter reduction compared to state-of-the-art systems while delivering 52 times faster inference. Experimental evaluation demonstrates competitive performance with only 15M parameters, outperforming OpenAI Jukebox in production quality and content unity while maintaining reasonable musical coherence. The ultra-lightweight architecture enables real-time deployment on consumer hardware, making AI-assisted music creation accessible for interactive applications and resource-constrained environments.

cs.SD

Natural Language Interfaces for Tabular Data Querying and Visualization: A Survey

The emergence of natural language processing has revolutionized the way users interact with tabular data, enabling a shift from traditional query languages and manual plotting to more intuitive, language-based interfaces. The rise of large language models (LLMs) such as ChatGPT and its successors has further advanced this field, opening new avenues for natural language processing techniques. This survey presents a comprehensive overview of natural language interfaces for tabular data querying and visualization, which allow users to interact with data using natural language queries. We introduce the fundamental concepts and techniques underlying these interfaces with a particular emphasis on semantic parsing, the key technology facilitating the translation from natural language to SQL queries or data visualization commands. We then delve into the recent advancements in Text-to-SQL and Text-to-Vis problems from the perspectives of datasets, methodologies, metrics, and system designs. This includes a deep dive into the influence of LLMs, highlighting their strengths, limitations, and potential for future improvements. Through this survey, we aim to provide a roadmap for researchers and practitioners interested in developing and applying natural language interfaces for data interaction in the era of large language models.

cs.CL

Predicting Three Types of Freezing of Gait Events Using Deep Learning Models

Freezing of gait is a Parkinson's Disease symptom that episodically inflicts a patient with the inability to step or turn while walking. While medical experts have discovered various triggers and alleviating actions for freezing of gait, the underlying causes and prediction models are still being explored today. Current freezing of gait prediction models that utilize machine learning achieve high sensitivity and specificity in freezing of gait predictions based on time-series data; however, these models lack specifications on the type of freezing of gait events. We develop various deep learning models using the transformer encoder architecture plus Bidirectional LSTM layers and different feature sets to predict the three different types of freezing of gait events. The best performing model achieves a score of 0.427 on testing data, which would rank top 5 in Kaggle's Freezing of Gait prediction competition, hosted by THE MICHAEL J. FOX FOUNDATION. However, we also recognize overfitting in training data that could be potentially improved through pseudo labelling on additional data and model architecture simplification.

cs.LG

Immersive Technologies in Virtual Companions: A Systematic Literature Review

The emergence of virtual companions is transforming the evolution of intelligent systems that effortlessly cater to the unique requirements of users. These advanced systems not only take into account the user present capabilities, preferences, and needs but also possess the capability to adapt dynamically to changes in the environment, as well as fluctuations in the users emotional state or behavior. A virtual companion is an intelligent software or application that offers support, assistance, and companionship across various aspects of users lives. Various enabling technologies are involved in building virtual companion, among these, Augmented Reality (AR), and Virtual Reality (VR) are emerging as transformative tools. While their potential for use in virtual companions or digital assistants is promising, their applications in these domains remain relatively unexplored. To address this gap, a systematic review was conducted to investigate the applications of VR, AR, and MR immersive technologies in the development of virtual companions. A comprehensive search across PubMed, Scopus, and Google Scholar yielded 28 relevant articles out of a pool of 644. The review revealed that immersive technologies, particularly VR and AR, play a significant role in creating digital assistants, offering a wide range of applications that brings various facilities in the individuals life in areas such as addressing social isolation, enhancing cognitive abilities and dementia care, facilitating education, and more. Additionally, AR and MR hold potential for enhancing Quality of life (QoL) within the context of virtual companion technology. The findings of this review provide a valuable foundation for further research in this evolving field.

cs.HC

A Machine Learning Approach to Detect Dehydration in Afghan Children

Child dehydration is a significant health concern, especially among children under 5 years of age who are more susceptible to diarrhea and vomiting. In Afghanistan, severe diarrhea contributes to child mortality due to dehydration. However, there is no evidence of research exploring the potential of machine learning techniques in diagnosing dehydration in Afghan children under five. To fill this gap, this study leveraged various classifiers such as Random Forest, Multilayer Perceptron, Support Vector Machine, J48, and Logistic Regression to develop a predictive model using a dataset of sick children retrieved from the Afghanistan Demographic and Health Survey (ADHS). The primary objective was to determine the dehydration status of children under 5 years. Among all the classifiers, Random Forest proved to be the most effective, achieving an accuracy of 91.46%, precision of 91%, and AUC of 94%. This model can potentially assist healthcare professionals in promptly and accurately identifying dehydration in under five children, leading to timely interventions, and reducing the risk of severe health complications. Our study demonstrates the potential of machine learning techniques in improving the early diagnosis of dehydration in Afghan children.

cs.LG

Mutual Information Assisted Ensemble Recommender System for Identifying Critical Risk Factors in Healthcare Prognosis

Purpose: Health recommenders act as important decision support systems, aiding patients and medical professionals in taking actions that lead to patients' well-being. These systems extract the information which may be of particular relevance to the end-user, helping them in making appropriate decisions. The present study proposes a feature recommender, as a part of a disease management system, that identifies and recommends the most important risk factors for an illness. Methods: A novel mutual information and ensemble-based feature ranking approach for identifying critical risk factors in healthcare prognosis is proposed. Results: To establish the effectiveness of the proposed method, experiments have been conducted on four benchmark datasets of diverse diseases (clear cell renal cell carcinoma (ccRCC), chronic kidney disease, Indian liver patient, and cervical cancer risk factors). The performance of the proposed recommender is compared with four state-of-the-art methods using recommender systems' performance metrics like average precision@K, precision@K, recall@K, F1@K, reciprocal rank@K. The method is able to recommend all relevant critical risk factors for ccRCC. It also attains a higher accuracy (96.6% and 98.6% using support vector machine and neural network, respectively) for ccRCC staging with a reduced feature set as compared to existing methods. Moreover, the top two features recommended using the proposed method with ccRCC, viz. size of tumor and metastasis status, are medically validated from the existing TNM system. Results are also found to be superior for the other three datasets. Conclusion: The proposed recommender can identify and recommend risk factors that have the most discriminating power for detecting diseases.

cs.LG

Personality Type Based on Myers-Briggs Type Indicator with Text Posting Style by using Traditional and Deep Learning

The term personality may be expressed in terms of the individual differences in characteristics pattern of thinking, feeling, and behavior. This work presents several machine learning techniques including Naive Bayes, Support Vector Machines, and Recurrent Neural Networks to predict people personality from text based on Myers-Briggs Type Indicator (MBTI). Furthermore, this project applies CRISP-DM, which stands for Cross-Industry Standard Process for Data Mining, to guide the learning process. Since, CRISP-DM is kind of iterative development, we have adopted it with agile methodology, which is a rapid iterative software development method, in order to reduce the development cycle to be minimal.

cs.CL

Transfer-Recursive-Ensemble Learning for Multi-Day COVID-19 Prediction in India using Recurrent Neural Networks

The current COVID-19 pandemic has put a huge challenge on the Indian health infrastructure. With more and more people getting affected during the second wave, the hospitals were over-burdened, running out of supplies and oxygen. In this scenario, prediction of the number of COVID-19 cases beforehand might have helped in the better utilization of limited resources and supplies. This manuscript deals with the prediction of new COVID-19 cases, new deaths and total active cases for multiple days in advance. The proposed method uses gated recurrent unit networks as the main predicting model. A study is conducted by building four models that are pre-trained on the data from four different countries (United States of America, Brazil, Spain and Bangladesh) and are fine-tuned or retrained on India's data. Since the four countries chosen have experienced different types of infection curves, the pre-training provides a transfer learning to the models incorporating diverse situations into account. Each of the four models then give a multiple days ahead predictions using recursive learning method for the Indian test data. The final prediction comes from an ensemble of the predictions of the combination of different models. This method with two countries, Spain and Brazil, is seen to achieve the best performance amongst all the combinations as well as compared to other traditional regression models.

cs.LG