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Junfeng Zuo

Publications and source records attributed to Junfeng Zuo.

2 recordsLinked to original sources

Planning as Dynamics Relaxation: Hippocampal Recurrent Network Realizes Optimal Goal-Directed Navigation

Neural correlates of spatial cognitive map are well documented, yet exactly how neural circuits perform spatial navigation in complex environments - e.g., reaching a goal while avoiding obstacles - remains largely unclear. Here, we show that a hippocampal network with appropriate recurrent connections can naturally achieve optimal goal-directed navigation via its relaxation dynamics. Specifically, we consider that the recurrent weights between the neurons represent the transition probabilities between spatial locations encoded by neurons; obstacles such as walls and blocked corridors are therefore reflected by the vanishing of connection weights. This connection pattern can be learned in the hippocampus via behavioral-timescale synaptic plasticity (BTSP) while the animal is exploring the environment. When a goal signal is presented, the network dynamics will relax into an activity field representing the goal location. We prove that this field is mathematically equivalent to the desirability field of a Linearly-solvable Markov Decision Process (LMDP), and the local log-gradient of the field indicates the navigation direction. Both theoretical analyses and simulations demonstrate that this recurrent network dynamics-mediated navigation is efficient and robust in environments with complex obstacle layouts. Moreover, only low-rank updates of the network's connection pattern are needed when the environment has local changes. We hope this study offers insight into a general circuit principle for planning in abstract rational maps in the brain beyond spatial navigation.

q-bio.NC

CANNs: A Toolkit for Research on Continuous Attractor Neural Networks

Continuous attractor neural networks (CANNs) are the canonical computational framework for how the brain encodes continuous variables such as spatial position, head direction, and movement direction, and explain the activity of hippocampal place cells, entorhinal grid cells, and head-direction cells. CANN research, however, is fragmented: most results rest on lab-specific implementations, general-purpose simulators lack CANN-specific abstractions, and the path from spike trains to attractor geometry in real recordings lacks a standardized toolkit. Here, we present a comprehensive open-source toolkit that unifies the full CANN research workflow. It combines three tightly integrated components: 1) canns, a Python library on BrainPy/JAX that provides standardized 1D/2D CANNs, spike-frequency-adaptation variants, grid cell networks, hierarchical path-integration models, and brain-inspired attractor architectures, together with curated datasets, task generators, an analyzer module and trainer modules for biologically plausible plasticity; 2) canns-lib, a Rust acceleration backend delivering hundreds-of-times speedups for spatial-navigation workloads and modest gains for Ripser-based persistent homology; 3) ASA (Attractor Structure Analyzer), a PySide6 pipeline applying persistent homology and cohomology to experimental neural recordings to detect ring-like and toroidal attractor signatures in real data. The toolkit ships with full-detail reproducible pipelines that recover recent CANN results including SFA-driven anticipative tracking, theta sweeps in head-direction/place/grid systems, and hierarchical path integration.

q-bio.NC