arXiv subjects

Kang Li

Publications and source records attributed to Kang Li.

At least 91 records · Page 5Linked to original sources

arXiv2024

TV-SAM: Increasing Zero-Shot Segmentation Performance on Multimodal Medical Images Using GPT-4 Generated Descriptive Prompts Without Human Annotation

This study presents a novel multimodal medical image zero-shot segmentation algorithm named the text-visual-prompt segment anything model (TV-SAM) without any manual annotations. The TV-SAM incorporates and integrates the large language model GPT-4, the vision language model GLIP, and the SAM to autonomously generate descriptive text prompts and visual bounding box prompts from medical images, thereby enhancing the SAM's capability for zero-shot segmentation. Comprehensive evaluations are implemented on seven public datasets encompassing eight imaging modalities to demonstrate that TV-SAM can effectively segment unseen targets across various modalities without additional training. TV-SAM significantly outperforms SAM AUTO and GSAM, closely matching the performance of SAM BBOX with gold standard bounding box prompts and surpasses the state-of-the-art methods on specific datasets such as ISIC and WBC. The study indicates that TV-SAM serves as an effective multimodal medical image zero-shot segmentation algorithm, highlighting the significant contribution of GPT-4 to zero-shot segmentation. By integrating foundational models such as GPT-4, GLIP, and SAM, the ability to address complex problems in specialized domains can be enhanced.

cs.CV↗

arXiv2024

MedLSAM: Localize and Segment Anything Model for 3D CT Images

Recent advancements in foundation models have shown significant potential in medical image analysis. However, there is still a gap in models specifically designed for medical image localization. To address this, we introduce MedLAM, a 3D medical foundation localization model that accurately identifies any anatomical part within the body using only a few template scans. MedLAM employs two self-supervision tasks: unified anatomical mapping (UAM) and multi-scale similarity (MSS) across a comprehensive dataset of 14,012 CT scans. Furthermore, we developed MedLSAM by integrating MedLAM with the Segment Anything Model (SAM). This innovative framework requires extreme point annotations across three directions on several templates to enable MedLAM to locate the target anatomical structure in the image, with SAM performing the segmentation. It significantly reduces the amount of manual annotation required by SAM in 3D medical imaging scenarios. We conducted extensive experiments on two 3D datasets covering 38 distinct organs. Our findings are twofold: 1) MedLAM can directly localize anatomical structures using just a few template scans, achieving performance comparable to fully supervised models; 2) MedLSAM closely matches the performance of SAM and its specialized medical adaptations with manual prompts, while minimizing the need for extensive point annotations across the entire dataset. Moreover, MedLAM has the potential to be seamlessly integrated with future 3D SAM models, paving the way for enhanced segmentation performance. Our code is public at \href{https://github.com/openmedlab/MedLSAM}

cs.CV↗

arXiv2024

Tracial states on groupoid $C^*$-algebras and essential freeness

Let $\mathcal{G}$ be a locally compact Hausdorff étale groupoid. We call a tracial state $τ$ on a general groupoid $C^*$-algebra $C_ν^*(\mathcal{G})$ canonical if $τ=τ|_{C_0(\mathcal{G}^{(0)})} \circ E$, where $E:C^*_ν(\mathcal{G}) \to C_0(\mathcal{G}^{(0)})$ is the canonical conditional expectation. In this paper, we consider so-called fixed point traces on $C_c(\mathcal{G})$, and prove that $\mathcal{G}$ is essentially free if and only if any tracial state on $C_ν^*(\mathcal{G})$ is canonical and any fixed point trace is extendable to $C_ν^*(\mathcal{G})$. As applications, we obtain the following: 1) a group action is essentially free if every tracial state on the reduced crossed product is canonical and every isotropy group is amenable; 2) if the groupoid $\mathcal{G}$ is second countable, amenable and essentially free then every (not necessarily faithful) tracial state on the reduced groupoid $C^*$-algebra is quasidiagonal.

math.OA↗

arXiv2024

MAT-SED: A Masked Audio Transformer with Masked-Reconstruction Based Pre-training for Sound Event Detection

Sound event detection (SED) methods that leverage a large pre-trained Transformer encoder network have shown promising performance in recent DCASE challenges. However, they still rely on an RNN-based context network to model temporal dependencies, largely due to the scarcity of labeled data. In this work, we propose a pure Transformer-based SED model with masked-reconstruction based pre-training, termed MAT-SED. Specifically, a Transformer with relative positional encoding is first designed as the context network, pre-trained by the masked-reconstruction task on all available target data in a self-supervised way. Both the encoder and the context network are jointly fine-tuned in a semi-supervised manner. Furthermore, a global-local feature fusion strategy is proposed to enhance the localization capability. Evaluation of MAT-SED on DCASE2023 task4 surpasses state-of-the-art performance, achieving 0.587/0.896 PSDS1/PSDS2 respectively.

cs.SD↗

arXiv2024

P-MSDiff: Parallel Multi-Scale Diffusion for Remote Sensing Image Segmentation

Diffusion models and multi-scale features are essential components in semantic segmentation tasks that deal with remote-sensing images. They contribute to improved segmentation boundaries and offer significant contextual information. U-net-like architectures are frequently employed in diffusion models for segmentation tasks. These architectural designs include dense skip connections that may pose challenges for interpreting intermediate features. Consequently, they might not efficiently convey semantic information throughout various layers of the encoder-decoder architecture. To address these challenges, we propose a new model for semantic segmentation known as the diffusion model with parallel multi-scale branches. This model consists of Parallel Multiscale Diffusion modules (P-MSDiff) and a Cross-Bridge Linear Attention mechanism (CBLA). P-MSDiff enhances the understanding of semantic information across multiple levels of granularity and detects repetitive distribution data through the integration of recursive denoising branches. It further facilitates the amalgamation of data by connecting relevant branches to the primary framework to enable concurrent denoising. Furthermore, within the interconnected transformer architecture, the LA module has been substituted with the CBLA module. This module integrates a semidefinite matrix linked to the query into the dot product computation of keys and values. This integration enables the adaptation of queries within the LA framework. This adjustment enhances the structure for multi-head attention computation, leading to enhanced network performance and CBLA is a plug-and-play module. Our model demonstrates superior performance based on the J1 metric on both the UAVid and Vaihingen Building datasets, showing improvements of 1.60% and 1.40% over strong baseline models, respectively.

cs.CV↗

arXiv2024

MedBench: A Comprehensive, Standardized, and Reliable Benchmarking System for Evaluating Chinese Medical Large Language Models

Ensuring the general efficacy and goodness for human beings from medical large language models (LLM) before real-world deployment is crucial. However, a widely accepted and accessible evaluation process for medical LLM, especially in the Chinese context, remains to be established. In this work, we introduce "MedBench", a comprehensive, standardized, and reliable benchmarking system for Chinese medical LLM. First, MedBench assembles the currently largest evaluation dataset (300,901 questions) to cover 43 clinical specialties and performs multi-facet evaluation on medical LLM. Second, MedBench provides a standardized and fully automatic cloud-based evaluation infrastructure, with physical separations for question and ground truth. Third, MedBench implements dynamic evaluation mechanisms to prevent shortcut learning and answer remembering. Applying MedBench to popular general and medical LLMs, we observe unbiased, reproducible evaluation results largely aligning with medical professionals' perspectives. This study establishes a significant foundation for preparing the practical applications of Chinese medical LLMs. MedBench is publicly accessible at https://medbench.opencompass.org.cn.

cs.CL↗

arXiv2024

Make Your Home Safe: Time-aware Unsupervised User Behavior Anomaly Detection in Smart Homes via Loss-guided Mask

Smart homes, powered by the Internet of Things, offer great convenience but also pose security concerns due to abnormal behaviors, such as improper operations of users and potential attacks from malicious attackers. Several behavior modeling methods have been proposed to identify abnormal behaviors and mitigate potential risks. However, their performance often falls short because they do not effectively learn less frequent behaviors, consider temporal context, or account for the impact of noise in human behaviors. In this paper, we propose SmartGuard, an autoencoder-based unsupervised user behavior anomaly detection framework. First, we design a Loss-guided Dynamic Mask Strategy (LDMS) to encourage the model to learn less frequent behaviors, which are often overlooked during learning. Second, we propose a Three-level Time-aware Position Embedding (TTPE) to incorporate temporal information into positional embedding to detect temporal context anomaly. Third, we propose a Noise-aware Weighted Reconstruction Loss (NWRL) that assigns different weights for routine behaviors and noise behaviors to mitigate the interference of noise behaviors during inference. Comprehensive experiments on three datasets with ten types of anomaly behaviors demonstrates that SmartGuard consistently outperforms state-of-the-art baselines and also offers highly interpretable results.

cs.CR↗

arXiv2024

Unified Modeling Enhanced Multimodal Learning for Precision Neuro-Oncology

Multimodal learning, integrating histology images and genomics, promises to enhance precision oncology with comprehensive views at microscopic and molecular levels. However, existing methods may not sufficiently model the shared or complementary information for more effective integration. In this study, we introduce a Unified Modeling Enhanced Multimodal Learning (UMEML) framework that employs a hierarchical attention structure to effectively leverage shared and complementary features of both modalities of histology and genomics. Specifically, to mitigate unimodal bias from modality imbalance, we utilize a query-based cross-attention mechanism for prototype clustering in the pathology encoder. Our prototype assignment and modularity strategy are designed to align shared features and minimizes modality gaps. An additional registration mechanism with learnable tokens is introduced to enhance cross-modal feature integration and robustness in multimodal unified modeling. Our experiments demonstrate that our method surpasses previous state-of-the-art approaches in glioma diagnosis and prognosis tasks, underscoring its superiority in precision neuro-Oncology.

cs.CV↗

arXiv2024

Nuclear dimension of subhomogeneous twisted groupoid C*-algebras and dynamic asymptotic dimension

We characterise subhomogeneity for twisted étale groupoid C*-algebras and obtain an upper bound on their nuclear dimension. As an application, we remove the principality assumption in recent results on upper bounds on the nuclear dimension of a twisted étale groupoid C*-algebra in terms of the dynamic asymptotic dimension of the groupoid and the covering dimension of its unit space. As a non-principal example, we show that the dynamic asymptotic dimension of any minimal (not necessarily free) action of the infinite dihedral group $D_\infty$ on an infinite compact Hausdorff space $X$ is always one. So if we further assume that $X$ is second-countable and has finite covering dimension, then $C(X)\rtimes_r D_\infty$ has finite nuclear dimension and is classifiable by its Elliott invariant.

math.OA↗

arXiv2024

Non-free almost finite actions for locally finite-by-virtually $\mathbb{Z}$ groups

In this paper, we study almost finiteness and almost finiteness in measure of non-free actions. Let $α:G\curvearrowright X$ be a minimal action of a locally finite-by-virtually $\mathbb{Z}$ group $G$ on the Cantor set $X$. We prove that under certain assumptions, the action $α$ is almost finite in measure if and only if $α$ is essentially free. As an application, we obtain that any minimal topologically free action of a virtually $\mathbb{Z}$ group on an infinite compact metrizable space with the small boundary property is almost finite. This is the first general result, assuming only topological freeness, in this direction, and these lead to new results on uniform property $Γ$ and $\mathcal{Z}$-stability for their crossed product $C^*$-algebras. Some concrete examples of minimal topological free (but non-free) subshifts are provided.

math.OA↗

arXiv2024

A Comprehensive Overview of Fish-Eye Camera Distortion Correction Methods

The fisheye camera, with its unique wide field of view and other characteristics, has found extensive applications in various fields. However, the fisheye camera suffers from significant distortion compared to pinhole cameras, resulting in distorted images of captured objects. Fish-eye camera distortion is a common issue in digital image processing, requiring effective correction techniques to enhance image quality. This review provides a comprehensive overview of various methods used for fish-eye camera distortion correction. The article explores the polynomial distortion model, which utilizes polynomial functions to model and correct radial distortions. Additionally, alternative approaches such as panorama mapping, grid mapping, direct methods, and deep learning-based methods are discussed. The review highlights the advantages, limitations, and recent advancements of each method, enabling readers to make informed decisions based on their specific needs.

cs.CV↗

arXiv2024

Evaluating the Application of ChatGPT in Outpatient Triage Guidance: A Comparative Study

The integration of Artificial Intelligence (AI) in healthcare presents a transformative potential for enhancing operational efficiency and health outcomes. Large Language Models (LLMs), such as ChatGPT, have shown their capabilities in supporting medical decision-making. Embedding LLMs in medical systems is becoming a promising trend in healthcare development. The potential of ChatGPT to address the triage problem in emergency departments has been examined, while few studies have explored its application in outpatient departments. With a focus on streamlining workflows and enhancing efficiency for outpatient triage, this study specifically aims to evaluate the consistency of responses provided by ChatGPT in outpatient guidance, including both within-version response analysis and between-version comparisons. For within-version, the results indicate that the internal response consistency for ChatGPT-4.0 is significantly higher than ChatGPT-3.5 (p=0.03) and both have a moderate consistency (71.2% for 4.0 and 59.6% for 3.5) in their top recommendation. However, the between-version consistency is relatively low (mean consistency score=1.43/3, median=1), indicating few recommendations match between the two versions. Also, only 50% top recommendations match perfectly in the comparisons. Interestingly, ChatGPT-3.5 responses are more likely to be complete than those from ChatGPT-4.0 (p=0.02), suggesting possible differences in information processing and response generation between the two versions. The findings offer insights into AI-assisted outpatient operations, while also facilitating the exploration of potentials and limitations of LLMs in healthcare utilization. Future research may focus on carefully optimizing LLMs and AI integration in healthcare systems based on ergonomic and human factors principles, precisely aligning with the specific needs of effective outpatient triage.

cs.CL↗

arXiv2024

SoK: On the Semantic AI Security in Autonomous Driving

Autonomous Driving (AD) systems rely on AI components to make safety and correct driving decisions. Unfortunately, today's AI algorithms are known to be generally vulnerable to adversarial attacks. However, for such AI component-level vulnerabilities to be semantically impactful at the system level, it needs to address non-trivial semantic gaps both (1) from the system-level attack input spaces to those at AI component level, and (2) from AI component-level attack impacts to those at the system level. In this paper, we define such research space as semantic AI security as opposed to generic AI security. Over the past 5 years, increasingly more research works are performed to tackle such semantic AI security challenges in AD context, which has started to show an exponential growth trend. In this paper, we perform the first systematization of knowledge of such growing semantic AD AI security research space. In total, we collect and analyze 53 such papers, and systematically taxonomize them based on research aspects critical for the security field. We summarize 6 most substantial scientific gaps observed based on quantitative comparisons both vertically among existing AD AI security works and horizontally with security works from closely-related domains. With these, we are able to provide insights and potential future directions not only at the design level, but also at the research goal, methodology, and community levels. To address the most critical scientific methodology-level gap, we take the initiative to develop an open-source, uniform, and extensible system-driven evaluation platform, named PASS, for the semantic AD AI security research community. We also use our implemented platform prototype to showcase the capabilities and benefits of such a platform using representative semantic AD AI attacks.

cs.CR↗

arXiv2024

FPL+: Filtered Pseudo Label-based Unsupervised Cross-Modality Adaptation for 3D Medical Image Segmentation

Adapting a medical image segmentation model to a new domain is important for improving its cross-domain transferability, and due to the expensive annotation process, Unsupervised Domain Adaptation (UDA) is appealing where only unlabeled images are needed for the adaptation. Existing UDA methods are mainly based on image or feature alignment with adversarial training for regularization, and they are limited by insufficient supervision in the target domain. In this paper, we propose an enhanced Filtered Pseudo Label (FPL+)-based UDA method for 3D medical image segmentation. It first uses cross-domain data augmentation to translate labeled images in the source domain to a dual-domain training set consisting of a pseudo source-domain set and a pseudo target-domain set. To leverage the dual-domain augmented images to train a pseudo label generator, domain-specific batch normalization layers are used to deal with the domain shift while learning the domain-invariant structure features, generating high-quality pseudo labels for target-domain images. We then combine labeled source-domain images and target-domain images with pseudo labels to train a final segmentor, where image-level weighting based on uncertainty estimation and pixel-level weighting based on dual-domain consensus are proposed to mitigate the adverse effect of noisy pseudo labels. Experiments on three public multi-modal datasets for Vestibular Schwannoma, brain tumor and whole heart segmentation show that our method surpassed ten state-of-the-art UDA methods, and it even achieved better results than fully supervised learning in the target domain in some cases.

cs.CV↗

arXiv2024

OpenMEDLab: An Open-source Platform for Multi-modality Foundation Models in Medicine

The emerging trend of advancing generalist artificial intelligence, such as GPTv4 and Gemini, has reshaped the landscape of research (academia and industry) in machine learning and many other research areas. However, domain-specific applications of such foundation models (e.g., in medicine) remain untouched or often at their very early stages. It will require an individual set of transfer learning and model adaptation techniques by further expanding and injecting these models with domain knowledge and data. The development of such technologies could be largely accelerated if the bundle of data, algorithms, and pre-trained foundation models were gathered together and open-sourced in an organized manner. In this work, we present OpenMEDLab, an open-source platform for multi-modality foundation models. It encapsulates not only solutions of pioneering attempts in prompting and fine-tuning large language and vision models for frontline clinical and bioinformatic applications but also building domain-specific foundation models with large-scale multi-modal medical data. Importantly, it opens access to a group of pre-trained foundation models for various medical image modalities, clinical text, protein engineering, etc. Inspiring and competitive results are also demonstrated for each collected approach and model in a variety of benchmarks for downstream tasks. We welcome researchers in the field of medical artificial intelligence to continuously contribute cutting-edge methods and models to OpenMEDLab, which can be accessed via https://github.com/openmedlab.

cs.CV↗

arXiv2024

Memory-Efficient Prompt Tuning for Incremental Histopathology Classification

Recent studies have made remarkable progress in histopathology classification. Based on current successes, contemporary works proposed to further upgrade the model towards a more generalizable and robust direction through incrementally learning from the sequentially delivered domains. Unlike previous parameter isolation based approaches that usually demand massive computation resources during model updating, we present a memory-efficient prompt tuning framework to cultivate model generalization potential in economical memory cost. For each incoming domain, we reuse the existing parameters of the initial classification model and attach lightweight trainable prompts into it for customized tuning. Considering the domain heterogeneity, we perform decoupled prompt tuning, where we adopt a domain-specific prompt for each domain to independently investigate its distinctive characteristics, and one domain-invariant prompt shared across all domains to continually explore the common content embedding throughout time. All domain-specific prompts will be appended to the prompt bank and isolated from further changes to prevent forgetting the distinctive features of early-seen domains. While the domain-invariant prompt will be passed on and iteratively evolve by style-augmented prompt refining to improve model generalization capability over time. In specific, we construct a graph with existing prompts and build a style-augmented graph attention network to guide the domain-invariant prompt exploring the overlapped latent embedding among all delivered domains for more domain generic representations. We have extensively evaluated our framework with two histopathology tasks, i.e., breast cancer metastasis classification and epithelium-stroma tissue classification, where our approach yielded superior performance and memory efficiency over the competing methods.

cs.CV↗

arXiv2024

Evaluating and Enhancing Large Language Models Performance in Domain-specific Medicine: Osteoarthritis Management with DocOA

The efficacy of large language models (LLMs) in domain-specific medicine, particularly for managing complex diseases such as osteoarthritis (OA), remains largely unexplored. This study focused on evaluating and enhancing the clinical capabilities of LLMs in specific domains, using osteoarthritis (OA) management as a case study. A domain specific benchmark framework was developed, which evaluate LLMs across a spectrum from domain-specific knowledge to clinical applications in real-world clinical scenarios. DocOA, a specialized LLM tailored for OA management that integrates retrieval-augmented generation (RAG) and instruction prompts, was developed. The study compared the performance of GPT-3.5, GPT-4, and a specialized assistant, DocOA, using objective and human evaluations. Results showed that general LLMs like GPT-3.5 and GPT-4 were less effective in the specialized domain of OA management, particularly in providing personalized treatment recommendations. However, DocOA showed significant improvements. This study introduces a novel benchmark framework which assesses the domain-specific abilities of LLMs in multiple aspects, highlights the limitations of generalized LLMs in clinical contexts, and demonstrates the potential of tailored approaches for developing domain-specific medical LLMs.

cs.CL↗

arXiv2024

Amplifying robotics capacities with a human touch: An immersive low-latency panoramic remote system

AI and robotics technologies have witnessed remarkable advancements in the past decade, revolutionizing work patterns and opportunities in various domains. The application of these technologies has propelled society towards an era of symbiosis between humans and machines. To facilitate efficient communication between humans and intelligent robots, we propose the "Avatar" system, an immersive low-latency panoramic human-robot interaction platform. We have designed and tested a prototype of a rugged mobile platform integrated with edge computing units, panoramic video capture devices, power batteries, robot arms, and network communication equipment. Under favorable network conditions, we achieved a low-latency high-definition panoramic visual experience with a delay of 357ms. Operators can utilize VR headsets and controllers for real-time immersive control of robots and devices. The system enables remote control over vast physical distances, spanning campuses, provinces, countries, and even continents (New York to Shenzhen). Additionally, the system incorporates visual SLAM technology for map and trajectory recording, providing autonomous navigation capabilities. We believe that this intuitive system platform can enhance efficiency and situational experience in human-robot collaboration, and with further advancements in related technologies, it will become a versatile tool for efficient and symbiotic cooperation between AI and humans.

cs.CY↗