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Li Shen

Publications and source records attributed to Li Shen.

At least 19 recordsLinked to original sources

Towards Explainable Industrial Anomaly Detection via Knowledge-Guided Latent Reasoning

Industrial anomaly detection demands precise reasoning over fine-grained defect patterns. However, existing multimodal large language models (MLLMs), pretrained on general-domain data, often struggle to capture category-specific anomalies, thereby limiting both detection accuracy and interpretability. To address these limitations, we propose Reason-IAD, a knowledge-guided dynamic latent reasoning framework for explainable industrial anomaly detection. Reason-IAD comprises two core components. First, a retrieval-augmented knowledge module incorporates category-specific textual descriptions into the model input, enabling context-aware reasoning over domain-specific defects. Second, an entropy-driven latent reasoning mechanism conducts iterative exploration within a compact latent space using optimizable latent think tokens, guided by an entropy-based reward that encourages confident and stable predictions. Furthermore, a dynamic visual injection strategy selectively incorporates the most informative image patches into the latent sequence, directing the reasoning process toward regions critical for anomaly detection. Extensive experimental results demonstrate that Reason-IAD consistently outperforms state-of-the-art methods across multiple tasks. The code will be publicly available at https://github.com/chenpeng052/Reason-IAD.

cs.CV↗

Multiscale Topology-Regulated Nonlinear Dynamics for Protein B-Factor Prediction and Single-Cell Type Classification

Protein B-factor prediction and single-cell type classification are important for characterizing structural variability and cellular heterogeneity, with applications in biological function analysis and drug discovery. However, static geometric descriptors do not directly capture how multiscale connectivity shapes responses to local perturbations. Here, we introduce multiscale graph-coupled Burgers response learning (MGCBRL), a framework integrating algebraic topology and nonlinear dynamics to construct predictive biological representations. Specifically, a filtration converts protein coordinates or cellular principal component scores into weighted graphs at ten neighborhood scales. Independent unit impulses initiate node-specific responses governed by nonlinear Burgers dynamics. Statistical summaries or sampled source-node trajectories then encode the influence of structural neighborhoods on transient signal evolution. The simulated responses serve as computational probes rather than models of biological motion. For cross-protein prediction, multiscale response statistics are combined with spectral perturbation descriptors measuring changes in Laplacian spectra after node removal. For single-cell classification, principal component scores augment these features to retain explicit expression-space information, and the resulting descriptors support downstream supervised learning. Across 104 proteins and 13 single-cell datasets, MGCBRL achieved configuration-selected mean scores of 0.888 for within-protein Pearson correlation and 0.950 for transductive cell classification balanced accuracy, with leave-one-protein-out mean correlations of 0.496-0.558. Our framework provides a shared strategy for transforming multiscale biological connectivity into informative response descriptors, supporting predictive analysis of protein structures and transcriptomic profiles.

q-bio.QM↗

MoLS: SNR-Guided Module-Wise Learning-Rate Calibration for Large Language Models

Large language models (LLMs) contain functionally distinct modules with heterogeneous gradient statistics. Although Adam(W) adapts updates at the parameter level, selecting relative learning rates across modules often relies on costly manual tuning. We study this problem through gradient signal-to-noise ratio (SNR). Our analysis identifies structural sources of module-wise SNR differences and relates SNR to the attenuation of Adam's normalized mean-gradient component. Based on these findings, we propose \textbf{Module-wise Learning Rate Scaling via SNR (\name)}, a lightweight method that replaces manual multiplier search with one-shot calibration. MoLS estimates module-level SNRs after an initial adaptation period and uses inverse-square-root scaling to determine relative learning-rate multipliers. The multipliers are introduced smoothly during warmup and then held fixed while the global learning-rate schedule continues. Our theoretical results quantify the effect of calibration and its sensitivity to estimation error and relative SNR drift. Extensive experiments across LLM pre-training and fine-tuning show that MoLS reduces perplexity and improves downstream accuracy with minimal computational overhead. It achieves performance comparable to carefully tuned module-specific learning rates and integrates with memory-efficient optimizers and parameter-efficient fine-tuning.

cs.LG↗

Fine-Grained Analysis of Catastrophic Forgetting in Continual Learning via Algorithmic Stability

Understanding catastrophic forgetting, in which learning new tasks degrades performance on previously learned tasks, remains a fundamental challenge in continual learning (CL). Existing theoretical analyses often rely on specific model or task structures and offer limited insight into how iterative optimization affects forgetting. To address this gap, we develop an algorithmic stability framework for expected population forgetting under SGD without prescribing a particular model architecture. Specifically, we decompose forgetting into intra-task and cross-task generalization gaps and empirical forgetting. To bound the generalization gaps, we track how a sample perturbation affects updates within a task and propagates through subsequent tasks. We consider constant, intra-task decaying, and continuously decaying learning-rate schedules. Comparing the two decaying schedules allows us to characterize how restarting learning-rate decay at task boundaries affects the propagation of historical sample perturbations. For empirical forgetting, we derive bounds for all three schedules by retaining cumulative gradient alignment along the optimization trajectory, without requiring convexity. Combining these results yields upper bounds on expected forgetting that capture the effects of training set size, the number of updates per task, the total number of tasks, learning-rate schedules, and cumulative gradient alignment. Finally, we conduct experiments on Split CIFAR-100 and Split MiniImageNet to examine the empirical implications of our theoretical findings.

cs.LG↗

Knowledge Acquisition During Pre-training? Large Language Models Learn Better With Auxiliary Views

Gaps remain in our understanding of how large language models (LLMs) acquire knowledge during pre-training. We find that auxiliary views, conceptual reformulations, are key to this process. We design controlled experiments to isolate this. First, holding the token budget fixed, allocating tokens from paraphrases to auxiliary views improves learning even for factual recall, which we use near-verbatim sentences from the original document to test. Second, the effectiveness of auxiliary views is not contingent on the strength of the model that generates them. Third, we establish that paraphrasing is helpful but only at smaller batch sizes. Fourth, we identify types of knowledge that aid learning in the presence of prior knowledge gaps. Finally, we examine how these effects manifest mechanistically via layer-wise biases and compression. Together, our findings suggest that auxiliary representations of knowledge are a key factor in the success of pre-training, and explains why data diversity matters. Further, our results provide clear recipes for synthetic data augmentation along with implications on the self-improvement in LLMs.

cs.CL↗

Learning to Pose Problems: Reasoning-Driven and Solver-Adaptive Data Synthesis

Data synthesis for training large reasoning models offers a scalable alternative to limited, human-curated datasets, enabling the creation of high-quality data. However, existing approaches face several challenges: (i) indiscriminate generation that ignores the solver's ability and yields low-value problems, or reliance on complex data pipelines to balance problem difficulty; and (ii) a lack of reasoning in problem generation, leading to shallow problem variants. In this paper, we develop a problem generator that reasons explicitly to plan problem directions before synthesis and adapts difficulty to the solver's ability. We recover problem-design CoT from human-authored multi-part questions, using later subquestions as targets to infer the design rationale. These traces initialize the generator, which is then optimized with a seed-conditioned reward based on solver answer consistency. The reward guides difficulty adjustment relative to each seed while favoring problems near the solver's competence boundary. Across 10 mathematical and general reasoning benchmarks, our method outperforms seed-only training by 2.69 and 3.39 percentage points after one and three rounds, respectively. The framework also extends to vision-language models. Our code is publicly available at https://github.com/WalkerWorldPeace/Reasoning-Synthesis.

cs.AI↗

LatentRiskBench: Measuring State-Dependent Risks in Enterprise Agents

Enterprise agents face safety risks that cannot be determined from individual actions alone. Existing safety benchmarks largely evaluate action-local risks, overlooking failures whose safety depends on workflow state. In such state-dependent risks, the same action may be safe in one context but violate policy in another. Hence, we introduce LatentRiskBench for evaluating such state-dependent risks in enterprise settings. It pairs risky trajectories with benign counterparts that share the same terminal action but differ in latent policy-relevant states, requiring models to reconstruct workflow context rather than rely on action-level cues. We also introduce new metrics for state-dependent risk evaluation, including a suite of residual risk (RR) measures. Experiments on the benchmark show that action-level evaluation detects only 0.09 of state-dependent violations, whereas state-level evaluation reaches 0.96. Existing guardrail methods largely overlook such risks unless they are explicitly applied to workflow states. Case studies on a commercial deployed scenario further show that the safety metrics embedded in the benchmark provide a more realistic measure of safety for enterprise agents. Our dataset and code are available at https://github.com/JingyueCong/LatentRiskBench.

cs.CL↗

SphereVAD: Training-Free Video Anomaly Detection via Geodesic Inference on the Unit Hypersphere

Video anomaly detection (VAD) aims to automatically identify events that deviate from normal patterns in untrimmed surveillance videos. Existing methods universally depend on large-scale annotations or task-specific training procedures, severely limiting their rapid deployment to novel scenes. We observe that intermediate-layer features of pre-trained multimodal large language models (MLLMs) already encode rich anomaly semantics, yet existing approaches rely on the language output pathway and fail to exploit the geometric discriminability latent in these representations. Based on this finding, we propose SphereVAD, a fully training-free, zero-shot VAD framework that recasts anomaly discrimination as von Mises-Fisher (vMF) likelihood-ratio geodesic inference on the unit hypersphere, unleashing latent discriminability through principled geometric reasoning rather than learning new representations. Specifically, SphereVAD first applies Frechet mean centering to unfold feature distributions and eliminate domain biases, then employs Holistic Scene Attention (HSA) to reinforce feature consistency using cross-video priors, and finally performs vMF-guided Spherical Geodesic Pulling (SGP) to align ambiguous segments with directional prototypes on the spherical manifold. This training-free pipeline requires only minimal synthetic images for calibration. SphereVAD establishes new state-of-the-art results among training-free approaches on three major benchmarks and remains competitive with fully supervised baselines. Code will be available upon acceptance.

cs.CV↗

ScienceBuddy-PV: A Verifier-Governed Recursive Improvement Protocol for Panvascular Intervention Research

ScienceBuddy-PV adapts the ScienceBuddy recursive-in-recursive design to panvascular intervention research through a structured evidence ledger, device-vessel ontology, abstention contract and retained failure bank. Recursive harness optimization and outer-loop model learning, including reinforcement learning, are specified but not executed. We audit a fixed component, rather than the complete agent system, using separate ARCADE syntax and stenosis tasks (1,000 training, 200 validation and 300 test images per task). A shared task-masked convolutional model was trained once per representation setting; its parameters and the heuristic support gate were then held fixed, with the stenosis threshold selected on validation data. On the locked test sets, syntax Dice was 0.475 (95% CI 0.459-0.490) and stenosis Dice was 0.231 (95% CI 0.214-0.249). Stenosis pixel AUROC was 0.957 and AUPRC was 0.180 at prevalence 0.00975. The gate accepted 76.7% of stenosis-frame outputs versus 100% for a score-only comparator. In a constructed mask audit, it accepted 44.3% of reference candidates and rejected 55.7%, exposing the cost of abstention. Acceptance does not establish correctness or clinical safety. This public-data component audit makes support and abstention measurable and provides a reproducible protocol for future collaborative agent studies. It does not demonstrate recursive improvement, patient-level validity or clinical device recommendations.

cs.AI↗

Formalizing Forgetting: Theory of Forgetting for Online Continual Learning

Online continual learning (OCL) requires a learner to acquire a sequence of tasks in a single pass over the data, and catastrophic forgetting of earlier tasks remains its central challenge. Despite the many methods proposed to mitigate forgetting, the theoretical understanding of forgetting in OCL is still limited: existing analyses mostly focus on linear, overparameterized, or neural tangent kernel regimes, and it remains unclear which factors govern forgetting and how they affect it. To fill this gap, we analyze single-pass Shuffle SGD under strongly convex and general convex objectives and derive explicit upper bounds on the expected final forgetting. Further analysis of these bounds shows how the per-task data amount, task similarity, and task ordering enter them, and that their effects can differ across objective classes. Moreover, experiments with neural networks on Split-CIFAR-100 and PMNIST show that the trends suggested by our theory also appear in practice, indicating that these insights extend beyond the convex setting.

cs.LG↗

Compactness and Consistency: A Conjoint Framework for Deep Graph Clustering

Graph clustering is a fundamental task in data analysis, aiming at grouping nodes with similar characteristics in the graph into clusters. This problem has been widely explored using graph neural networks (GNNs) due to their ability to leverage node attributes and graph topology for effective cluster assignments. However, representations learned through GNNs typically struggle to capture global relationships between nodes via local message-passing mechanisms. Moreover, the redundancy and noise inherently present in graph data may easily result in node representations lacking compactness and robustness. To address these issues, we propose a conjoint framework CoCo, which captures compactness and consistency in the learned node representations for deep graph clustering. Technically, our CoCo leverages graph convolutional filters to learn robust node representations from both local and global views, and then encodes them into low-rank compact embeddings, thus effectively removing the redundancy and noise as well as uncovering the intrinsic underlying structure. To further enrich the node semantics, we develop a consistency learning strategy based on compact embeddings to facilitate knowledge transfer from the two perspectives. Our experimental results indicate that our CoCo outperforms state-of-the-art counterparts on various datasets.

cs.LG↗

Intervention anchors and scientific verification in synthetic vascular predictive representations

Complete orthogonal predictive coordinates do not by themselves bind a latent direction to a named intervention. We present a mathematical and synthetic audit motivated by vascular device-vessel suitcordance. Capacity-matched least-squares predictors were exactly equivalent under complete fixed output transforms, whereas an anchor-only observer recovered interpretations only within the span of known perturbation signatures. Six three-dimensional configurations across 64 seeds gave a maximum paired prediction discrepancy of 6.7e-15 but a median untransported edit error of 1.513. Coordinate transport removed that error. Noisy and weak anchors constrained calibration stability, and changing the representation basis required recalibration or verified transport. Across 256 additional fits in dimensions 3-24, prediction equivalence persisted within 4.0e-15. We then evaluated nine deliberate runnable fault classes across 64 seeds. All 576 faulty executions completed, but each violated at least one reconstruction, prediction, delivered-edit or scope contract; all 320 valid control records passed. Repeating a faulty implementation gave exact self-agreement despite error against the separately computed simulator expectation. For one omitted-direction defect, probe coverage followed its analytic law, and rank-aware abstention protected unsupported interpretations. Scalar-noise experiments exposed both missed weak faults and excessive rejection under narrow relative tolerances. These controls provide an executable separation of prediction, semantic support and scientific acceptance. They are synthetic numerical audits, not clinical validation, neural JEPA-Anything replication, agent learning or patient treatment-effect estimation.

cs.AI↗

Aligning Multimodal Patient Evidence with Biomedical Knowledge Graphs for Clinical LLMs

Clinical questions often depend on linking a patient's multimodal evidence to external biomedical knowledge, yet existing predictive systems rarely represent such links explicitly, so they can neither be traced to their evidence sources nor removed to measure their contributions. We present MM-KG (Multimodal Knowledge Graph), which represents heterogeneous, multimodal patient observations and biomedical concepts as separate layers in one typed graph, joined by explicit alignment edges. First, modality-specific harmonizers convert EHR text, imaging, genomic, and biospecimen data into typed observations mapped to UMLS concepts, which a route-prioritized aligner links to a biomedical knowledge graph. Query-conditioned retrieval then selects a compact subgraph for downstream use by a large language model or a graph neural network. We build MM-KGs for MIMIC-IV and ADNI, and evaluate them with a 2x2 design that separates patient evidence, biomedical knowledge, and their interaction. On questions that require both sources, neither source alone performs far above chance, whereas their combination yields a drug-controlled AUROC interaction of +0.194 on MIMIC and +0.299 on ADNI. On held-out five-candidate ranking, MM-KG outperforms MindMap by +0.131 Hits@1 and leads an adapted GraphCare on the items that require consulting the patient, and deleting the single answer-bearing relation from the retrieved packet returns Hits@1 to the no-knowledge baseline. Finally, query-conditioned retrieval reaches 0.731 AUROC with 6.8x less context than the strongest generic policy, whereas static knowledge graph context gives no consistent gain on ordinary outcome prediction. Knowledge graphs thus benefit clinical LLMs not as background context but as explicit links between multimodal patient evidence and the relation a question requires, and MM-KG makes these links retrievable, traceable, and testable.

cs.LG↗

RoMod: Temporal Routing Modulation via Mixture-of-Experts for Video Anomaly Detection

Intermediate-layer features from multimodal large language models have shown strong potential for video anomaly detection (VAD), yet the origin of their discriminative power remains unclear. We study this question using sparse mixture-of-experts (MoE) models, whose explicit expert structure and sparse activation make their internal computation easier to inspect. With a fully frozen backbone and no additional training, we find that anomaly-related evidence is concentrated in a small set of experts. These experts recur across layers, spontaneously specialize in different anomaly types, and together form a dynamic routing subnetwork. We further show that the output channels most strongly influenced by these experts are also the hidden dimensions that contain the most anomaly-relevant information. Routing statistics can therefore serve as an internal anomaly cue that complements semantic features.Based on these findings, we propose RoMod, an efficient VAD framework trained with only \(5\%\) of weakly labeled videos. RoMod includes a Routing-Modulated Fusion module, RoMF, and a Routing-aware Temporal Network, RoTN. RoMF uses routing signals to adaptively recalibrate hidden semantic channels. Its design also prevents the routing branch from bypassing semantic features and making predictions on its own. RoTN captures the temporal evolution of anomalies from onset to persistence and termination. Experiments on three benchmarks show that RoMod achieves state-of-the-art performance while running substantially faster than dense backbones of comparable size.

cs.CV↗

Pareto-Improving Adversarial Attacks with Primal-Dual Regularization

Transferable adversarial attacks are arguably the most practical black-box threat model. Under the same perturbation budget, stronger transfer attacks attain higher attack success rate (ASR), yet their imperceptibility also tends to degrade. Under such a fixed-budget protocol, transferability and imperceptibility therefore appear to trade off against each other. We argue that this conflict is an artifact of fixed-budget evaluation, not an intrinsic trade-off. When attacks are compared on the ASR--imperceptibility Pareto frontier obtained by sweeping $ε$, stronger transfer attacks already attain better imperceptibility at matched ASR than weaker ones. To exploit this latent advantage, we introduce the stealthy transfer attack ST, a plug-in primal-dual wrapper that adds an $L_\infty$ saturation regularizer to the standard constrained objective and resolves it through a two-step primal-dual update: a projected primal step on the perturbation coupled with an $L_1$-ball projection on a dual variable that absorbs the regularizer through Fenchel duality, requiring no auxiliary models or handcrafted perceptual priors. Empirically, ST extends the Pareto frontier across different base attacks and additional surrogate architectures. At $ε{=}16/255$, average imperceptibility gains over each base attack are $17\%$ on LPIPS and $14\%$ on NIQE while ASR is preserved or improved. At matched high-ASR levels, the strongest ST variants further Pareto-dominate dedicated stealth-oriented transfer attacks, confirming that the latent imperceptibility advantage of strong transfer attacks can be unlocked by a primal-dual optimization wrapper without sacrificing transferability. Code will be made available at \url{https://github.com/AndssY/ST}.

cs.LG↗

Q-learning Penalized Transformer for Safe Offline Reinforcement Learning

This paper addresses the problem of safe offline reinforcement learning, which involves training a policy to satisfy safety constraints using an offline dataset. This problem is inherently challenging as it requires balancing three highly interconnected and competing objectives: satisfying safety constraints, maximizing rewards, and adhering to the behavior regularization imposed by the offline dataset. To tackle this trilogy challenge, we propose Q-learning Penalized Transformer policy (QPT), a \emph{training--inference consistent} framework that bridges conditional sequence modeling with constraint-aware value estimation. QPT trains a Transformer policy that generates actions conditioned on trajectory context and target return/cost, retaining strong behavior regularization. To inject explicit safety semantics during learning, we augment sequence-model training with a Q-shaped penalty using learned reward and cost Q-functions to favor high return under low constraint violation. At inference, the same Q-functions enforce the cost threshold and choose the highest-reward feasible action, closing the loop between training and deployment. We provide a principled analysis under stylized near-deterministic CMDPs, characterizing how Q-penalized conditional generation improve safety and performance. Empirically, QPT consistently outperforms strong safe offline RL baselines across 38 tasks on the DSRL benchmark, and exhibits robust zero-shot adaptation to different constraint thresholds.

cs.LG↗

Alignment-Guided Flow Transformer for Efficient Vision-Language-Action Policy Learning

Recent advances in Vision-Language-Action (VLA) models point toward general-purpose robotic intelligence by unifying perception, instruction, and control. Despite impressive progress, existing VLA models often adapt poorly due to \emph{tri-modal misalignment} among vision, language, and action, which weakens action grounding and hurts generalization and fine-tuning efficiency. In this work, we present Alignment-Guided Flow Transformer (AGFT), a novel framework that explicitly enforces tri-modal alignment through a dedicated alignment loss, bridging the representational gap across modalities and enhancing task adaptation. While prior research has predominantly emphasized bi-modal vision--language alignment, we systematically formalize and study tri-modal alignment in VLA models, and provide both ablations and analysis to isolate its role in improving adaptation and robustness. To further accelerate deployment, we adopt a flow-matching objective, enabling substantially fewer inference steps than diffusion-based policies while maintaining accuracy. Theoretically, we establish a quantitative connection between the tri-modal alignment gap and the optimization tightness of flow matching; empirically, experiments on the extensive benchmark show that AGFT achieves superior success rates and lower inference latency compared to SOTA baselines, underscoring tri-modal alignment as a key ingredient for scaling robust VLA manipulation.

cs.LG↗

The 1.6 $μ\mathrm{m}$ $\rm{H^{-}}$ bump as a diagnostic of TP-AGB contributions and recent quenching. I. Insights from stellar population models

The 1.6 $μ\mathrm{m}$ $\rm{H^{-}}$ bump arises from a minimum in the opacity of the negative hydrogen ion in cool stellar atmospheres. Although it is recognized as a common feature in galaxy spectra, its potential for studying stellar populations and recent quenching remains little explored. Its enhancement at intermediate ages is strong in some stellar population models with substantial thermally pulsing asymptotic giant branch (TP-AGB) contributions but weak or absent in others. This variation makes the feature both a potential age diagnostic and a source of model uncertainty. We use models based on the X-shooter Spectral Library (XSL) and Flexible Stellar Population Synthesis (FSPS) to examine what drives this behavior and what it can reveal about quenching. Controlled FSPS experiments show that the $\rm{H^{-}}$ bump depends on both the amount of TP-AGB light and the stellar template used to represent it. The adopted XSL and TP-AGB-on FSPS models predict a transient enhancement following rapid quenching, with a different age response from optical spectral features. Combining these diagnostics can therefore provide additional information about recent quenching, although the interpretation depends on the population model and star-formation history. An illustrative comparison with existing JWST spectra shows that models including TP-AGB contributions can describe the observed $\rm{H^{-}}$ region reasonably well. These results motivate further use of the $\rm{H^{-}}$ bump to test TP-AGB prescriptions and investigate quenching with current and forthcoming observations.

astro-ph.GA↗