arXiv subjects

Moi Hoon Yap

Publications and source records attributed to Moi Hoon Yap.

At least 19 recordsLinked to original sources

arXiv2026

Coverage-aware Semantic Representation Learning for Underrepresented Visual Concepts

Modern vision models increasingly rely on rich semantic representations that extend beyond class labels to include descriptive concepts, attributes, and contextual cues. However, semantic concepts are not uniformly represented across classes: a concept may be frequent globally yet remain underrepresented within a class, resulting in low class-concept coverage. We formalize this class-concept phenomenon as Semantic Coverage Imbalance (SCI) and study its relationship with learned semantic representations. We find that lower class-concept coverage is consistently associated with weaker semantic representations. To address this, we introduce Coverage-aware Semantic Representation Learning, which shares more semantic structure for low coverage or uncertain relations while preserving more pair-specific structure for high coverage relations. We instantiate this principle in SemCovNet with Coverage-Calibrated Semantic Sharing (CCSS), a coverage- and uncertainty-aware partial-pooling mechanism. Using a range of vision datasets spanning facial attributes and fine-grained recognition, as well as real-world medical datasets, we show that SCI is widespread, degrades representation quality, and can be mitigated through coverage-aware semantic representation learning.

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arXiv2026

CoFiDA-M: Concept-Aware Feature Modulation for Cross-Domain Adaptation with Image-Only Inference

Models for AI-based skin cancer screening suffer a severe performance drop when shifting from expert dermoscopic (source) images to consumer-grade clinical (target) images, hindering real-world deployment. Existing domain adaptation methods often ignore crucial semantic invariants, such as clinical concepts. While new foundation models like MONET can provide this semantic information as dense, probabilistic scores, this metadata is unavailable at test time, creating a deployment paradox for practical image-only screening tools. We address this gap by proposing CoFiDA-M, a privileged information framework that learns from concepts at training time but deploys as an image-only model. Our method trains a teacher network that uses MONET concept probabilities to guide a FiLM modulator, transforming visual features into a semantically ``edited" feature space. A lightweight, image-only student is then trained to reproduce this edited representation, not just the teacher's final predictions. This distillation ``bakes" the clinical reasoning into the student's weights. On a challenging multi-dataset benchmark, our image-only student significantly outperforms state-of-the-art approaches, especially in melanoma recall. Our work provides a practical and generalizable framework for leveraging noisy, probabilistic metadata as privileged information, demonstrating strong cross-dataset robustness and potential for real-world deployment beyond dermatology. Implementation code is available at: https://github.com/mmu-dermatology-research/CoFiDA.git

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arXiv2026

MEGC2026: Micro-Expression Grand Challenge on Visual Question Answering

Facial micro-expressions (MEs) are involuntary movements of the face that occur spontaneously when a person experiences an emotion but attempts to suppress or repress the facial expression, typically found in a high-stakes environment. In recent years, substantial advancements have been made in the areas of ME recognition, spotting, and generation. The emergence of multimodal large language models (MLLMs) and large vision-language models (LVLMs) offers promising new avenues for enhancing ME analysis through their powerful multimodal reasoning capabilities. The ME grand challenge (MEGC) 2026 introduces two tasks that reflect these evolving research directions: (1) ME video question answering (ME-VQA), which explores ME understanding through visual question answering on relatively short video sequences, leveraging MLLMs or LVLMs to address diverse question types related to MEs; and (2) ME long-video question answering (ME-LVQA), which extends VQA to long-duration video sequences in realistic settings, requiring models to handle temporal reasoning and subtle micro-expression detection across extended time periods. All participating algorithms are required to submit their results on a public leaderboard. More details are available at https://megc2026.github.io.

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arXiv2025

MEGC2025: Micro-Expression Grand Challenge on Spot Then Recognize and Visual Question Answering

Facial micro-expressions (MEs) are involuntary movements of the face that occur spontaneously when a person experiences an emotion but attempts to suppress or repress the facial expression, typically found in a high-stakes environment. In recent years, substantial advancements have been made in the areas of ME recognition, spotting, and generation. However, conventional approaches that treat spotting and recognition as separate tasks are suboptimal, particularly for analyzing long-duration videos in realistic settings. Concurrently, the emergence of multimodal large language models (MLLMs) and large vision-language models (LVLMs) offers promising new avenues for enhancing ME analysis through their powerful multimodal reasoning capabilities. The ME grand challenge (MEGC) 2025 introduces two tasks that reflect these evolving research directions: (1) ME spot-then-recognize (ME-STR), which integrates ME spotting and subsequent recognition in a unified sequential pipeline; and (2) ME visual question answering (ME-VQA), which explores ME understanding through visual question answering, leveraging MLLMs or LVLMs to address diverse question types related to MEs. All participating algorithms are required to run on this test set and submit their results on a leaderboard. More details are available at https://megc2025.github.io.

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arXiv2025

Gaussian Random Fields as an Abstract Representation of Patient Metadata for Multimodal Medical Image Segmentation

The growing rate of chronic wound occurrence, especially in patients with diabetes, has become a concerning trend in recent years. Chronic wounds are difficult and costly to treat, and have become a serious burden on health care systems worldwide. Chronic wounds can have devastating consequences for the patient, with infection often leading to reduced quality of life and increased mortality risk. Innovative deep learning methods for the detection and monitoring of such wounds have the potential to reduce the impact to both patient and clinician. We present a novel multimodal segmentation method which allows for the introduction of patient metadata into the training workflow whereby the patient data are expressed as Gaussian random fields. Our results indicate that the proposed method improved performance when utilising multiple models, each trained on different metadata categories. Using the Diabetic Foot Ulcer Challenge 2022 test set, when compared to the baseline results (intersection over union = 0.4670, Dice similarity coefficient = 0.5908) we demonstrate improvements of +0.0220 and +0.0229 for intersection over union and Dice similarity coefficient respectively. This paper presents the first study to focus on integrating patient data into a chronic wound segmentation workflow. Our results show significant performance gains when training individual models using specific metadata categories, followed by average merging of prediction masks using distance transforms. All source code for this study is available at: https://github.com/mmu-dermatology-research/multimodal-grf

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arXiv2024

An Enhanced Harmonic Densely Connected Hybrid Transformer Network Architecture for Chronic Wound Segmentation Utilising Multi-Colour Space Tensor Merging

Chronic wounds and associated complications present ever growing burdens for clinics and hospitals world wide. Venous, arterial, diabetic, and pressure wounds are becoming increasingly common globally. These conditions can result in highly debilitating repercussions for those affected, with limb amputations and increased mortality risk resulting from infection becoming more common. New methods to assist clinicians in chronic wound care are therefore vital to maintain high quality care standards. This paper presents an improved HarDNet segmentation architecture which integrates a contrast-eliminating component in the initial layers of the network to enhance feature learning. We also utilise a multi-colour space tensor merging process and adjust the harmonic shape of the convolution blocks to facilitate these additional features. We train our proposed model using wound images from light-skinned patients and test the model on two test sets (one set with ground truth, and one without) comprising only darker-skinned cases. Subjective ratings are obtained from clinical wound experts with intraclass correlation coefficient used to determine inter-rater reliability. For the dark-skin tone test set with ground truth, we demonstrate improvements in terms of Dice similarity coefficient (+0.1221) and intersection over union (+0.1274). Qualitative analysis showed high expert ratings, with improvements of >3% demonstrated when comparing the baseline model with the proposed model. This paper presents the first study to focus on darker-skin tones for chronic wound segmentation using models trained only on wound images exhibiting lighter skin. Diabetes is highly prevalent in countries where patients have darker skin tones, highlighting the need for a greater focus on such cases. Additionally, we conduct the largest qualitative study to date for chronic wound segmentation.

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arXiv2023

Biomedical image analysis competitions: The state of current participation practice

The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known about the common practice as well as bottlenecks faced by the community in tackling the research questions posed. To shed light on the status quo of algorithm development in the specific field of biomedical imaging analysis, we designed an international survey that was issued to all participants of challenges conducted in conjunction with the IEEE ISBI 2021 and MICCAI 2021 conferences (80 competitions in total). The survey covered participants' expertise and working environments, their chosen strategies, as well as algorithm characteristics. A median of 72% challenge participants took part in the survey. According to our results, knowledge exchange was the primary incentive (70%) for participation, while the reception of prize money played only a minor role (16%). While a median of 80 working hours was spent on method development, a large portion of participants stated that they did not have enough time for method development (32%). 25% perceived the infrastructure to be a bottleneck. Overall, 94% of all solutions were deep learning-based. Of these, 84% were based on standard architectures. 43% of the respondents reported that the data samples (e.g., images) were too large to be processed at once. This was most commonly addressed by patch-based training (69%), downsampling (37%), and solving 3D analysis tasks as a series of 2D tasks. K-fold cross-validation on the training set was performed by only 37% of the participants and only 50% of the participants performed ensembling based on multiple identical models (61%) or heterogeneous models (39%). 48% of the respondents applied postprocessing steps.

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arXiv2023

Dermoscopic Dark Corner Artifacts Removal: Friend or Foe?

One of the more significant obstacles in classification of skin cancer is the presence of artifacts. This paper investigates the effect of dark corner artifacts, which result from the use of dermoscopes, on the performance of a deep learning binary classification task. Previous research attempted to remove and inpaint dark corner artifacts, with the intention of creating an ideal condition for models. However, such research has been shown to be inconclusive due to lack of available datasets labelled with dark corner artifacts and detailed analysis and discussion. To address these issues, we label 10,250 skin lesion images from publicly available datasets and introduce a balanced dataset with an equal number of melanoma and non-melanoma cases. The training set comprises 6126 images without artifacts, and the testing set comprises 4124 images with dark corner artifacts. We conduct three experiments to provide new understanding on the effects of dark corner artifacts, including inpainted and synthetically generated examples, on a deep learning method. Our results suggest that introducing synthetic dark corner artifacts which have been superimposed onto the training set improved model performance, particularly in terms of the true negative rate. This indicates that deep learning learnt to ignore dark corner artifacts, rather than treating it as melanoma, when dark corner artifacts were introduced into the training set. Further, we propose a new approach to quantifying heatmaps indicating network focus using a root mean square measure of the brightness intensity in the different regions of the heatmaps. This paper provides a new guideline for skin lesions analysis with an emphasis on reproducibility.

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arXiv2023

Venn Diagram Multi-label Class Interpretation of Diabetic Foot Ulcer with Color and Sharpness Enhancement

DFU is a severe complication of diabetes that can lead to amputation of the lower limb if not treated properly. Inspired by the 2021 Diabetic Foot Ulcer Grand Challenge, researchers designed automated multi-class classification of DFU, including infection, ischaemia, both of these conditions, and none of these conditions. However, it remains a challenge as classification accuracy is still not satisfactory. This paper proposes a Venn Diagram interpretation of multi-label CNN-based method, utilizing different image enhancement strategies, to improve the multi-class DFU classification. We propose to reduce the four classes into two since both class wounds can be interpreted as the simultaneous occurrence of infection and ischaemia and none class wounds as the absence of infection and ischaemia. We introduce a novel Venn Diagram representation block in the classifier to interpret all four classes from these two classes. To make our model more resilient, we propose enhancing the perceptual quality of DFU images, particularly blurry or inconsistently lit DFU images, by performing color and sharpness enhancements on them. We also employ a fine-tuned optimization technique, adaptive sharpness aware minimization, to improve the CNN model generalization performance. The proposed method is evaluated on the test dataset of DFUC2021, containing 5,734 images and the results are compared with the top-3 winning entries of DFUC2021. Our proposed approach outperforms these existing approaches and achieves Macro-Average F1, Recall and Precision scores of 0.6592, 0.6593, and 0.6652, respectively.Additionally, We perform ablation studies and image quality measurements to further interpret our proposed method. This proposed method will benefit patients with DFUs since it tackles the inconsistencies in captured images and can be employed for a more robust remote DFU wound classification.

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arXiv2023

Quantifying the Effect of Image Similarity on Diabetic Foot Ulcer Classification

This research conducts an investigation on the effect of visually similar images within a publicly available diabetic foot ulcer dataset when training deep learning classification networks. The presence of binary-identical duplicate images in datasets used to train deep learning algorithms is a well known issue that can introduce unwanted bias which can degrade network performance. However, the effect of visually similar non-identical images is an under-researched topic, and has so far not been investigated in any diabetic foot ulcer studies. We use an open-source fuzzy algorithm to identify groups of increasingly similar images in the Diabetic Foot Ulcers Challenge 2021 (DFUC2021) training dataset. Based on each similarity threshold, we create new training sets that we use to train a range of deep learning multi-class classifiers. We then evaluate the performance of the best performing model on the DFUC2021 test set. Our findings show that the model trained on the training set with the 80\% similarity threshold images removed achieved the best performance using the InceptionResNetV2 network. This model showed improvements in F1-score, precision, and recall of 0.023, 0.029, and 0.013, respectively. These results indicate that highly similar images can contribute towards the presence of performance degrading bias within the Diabetic Foot Ulcers Challenge 2021 dataset, and that the removal of images that are 80\% similar from the training set can help to boost classification performance.

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arXiv2023

Diabetic Foot Ulcer Grand Challenge 2022 Summary

The Diabetic Foot Ulcer Challenge 2022 focused on the task of diabetic foot ulcer segmentation, based on the work completed in previous DFU challenges. The challenge provided 4000 images of full-view foot ulcer images together with corresponding delineation of ulcer regions. This paper provides an overview of the challenge, a summary of the methods proposed by the challenge participants, the results obtained from each technique, and a comparison of the challenge results. The best-performing network was a modified HarDNet-MSEG, with a Dice score of 0.7287.

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arXiv2023

Why is the winner the best?

International benchmarking competitions have become fundamental for the comparative performance assessment of image analysis methods. However, little attention has been given to investigating what can be learnt from these competitions. Do they really generate scientific progress? What are common and successful participation strategies? What makes a solution superior to a competing method? To address this gap in the literature, we performed a multi-center study with all 80 competitions that were conducted in the scope of IEEE ISBI 2021 and MICCAI 2021. Statistical analyses performed based on comprehensive descriptions of the submitted algorithms linked to their rank as well as the underlying participation strategies revealed common characteristics of winning solutions. These typically include the use of multi-task learning (63%) and/or multi-stage pipelines (61%), and a focus on augmentation (100%), image preprocessing (97%), data curation (79%), and postprocessing (66%). The "typical" lead of a winning team is a computer scientist with a doctoral degree, five years of experience in biomedical image analysis, and four years of experience in deep learning. Two core general development strategies stood out for highly-ranked teams: the reflection of the metrics in the method design and the focus on analyzing and handling failure cases. According to the organizers, 43% of the winning algorithms exceeded the state of the art but only 11% completely solved the respective domain problem. The insights of our study could help researchers (1) improve algorithm development strategies when approaching new problems, and (2) focus on open research questions revealed by this work.

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arXiv2022

AAU-net: An Adaptive Attention U-net for Breast Lesions Segmentation in Ultrasound Images

Various deep learning methods have been proposed to segment breast lesion from ultrasound images. However, similar intensity distributions, variable tumor morphology and blurred boundaries present challenges for breast lesions segmentation, especially for malignant tumors with irregular shapes. Considering the complexity of ultrasound images, we develop an adaptive attention U-net (AAU-net) to segment breast lesions automatically and stably from ultrasound images. Specifically, we introduce a hybrid adaptive attention module, which mainly consists of a channel self-attention block and a spatial self-attention block, to replace the traditional convolution operation. Compared with the conventional convolution operation, the design of the hybrid adaptive attention module can help us capture more features under different receptive fields. Different from existing attention mechanisms, the hybrid adaptive attention module can guide the network to adaptively select more robust representation in channel and space dimensions to cope with more complex breast lesions segmentation. Extensive experiments with several state-of-the-art deep learning segmentation methods on three public breast ultrasound datasets show that our method has better performance on breast lesion segmentation. Furthermore, robustness analysis and external experiments demonstrate that our proposed AAU-net has better generalization performance on the segmentation of breast lesions. Moreover, the hybrid adaptive attention module can be flexibly applied to existing network frameworks.

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arXiv2022

Translating Clinical Delineation of Diabetic Foot Ulcers into Machine Interpretable Segmentation

Diabetic foot ulcer is a severe condition that requires close monitoring and management. For training machine learning methods to auto-delineate the ulcer, clinical staff must provide ground truth annotations. In this paper, we propose a new diabetic foot ulcers dataset, namely DFUC2022, the largest segmentation dataset where ulcer regions were manually delineated by clinicians. We assess whether the clinical delineations are machine interpretable by deep learning networks or if image processing refined contour should be used. By providing benchmark results using a selection of popular deep learning algorithms, we draw new insights into the limitations of DFU wound delineation and report on the associated issues. This paper provides some observations on baseline models to facilitate DFUC2022 Challenge in conjunction with MICCAI 2022. The leaderboard will be ranked by Dice score, where the best FCN-based method is 0.5708 and DeepLabv3+ achieved the best score of 0.6277. This paper demonstrates that image processing using refined contour as ground truth can provide better agreement with machine predicted results. DFUC2022 will be released on the 27th April 2022.

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arXiv2022

3D-CNN for Facial Micro- and Macro-expression Spotting on Long Video Sequences using Temporal Oriented Reference Frame

Facial expression spotting is the preliminary step for micro- and macro-expression analysis. The task of reliably spotting such expressions in video sequences is currently unsolved. The current best systems depend upon optical flow methods to extract regional motion features, before categorisation of that motion into a specific class of facial movement. Optical flow is susceptible to drift error, which introduces a serious problem for motions with long-term dependencies, such as high frame-rate macro-expression. We propose a purely deep learning solution which, rather than tracking frame differential motion, compares via a convolutional model, each frame with two temporally local reference frames. Reference frames are sampled according to calculated micro- and macro-expression duration. As baseline for MEGC2021 using leave-one-subject-out evaluation method, we show that our solution achieves F1-score of 0.105 in a high frame-rate (200 fps) SAMM long videos dataset (SAMM-LV) and is competitive in a low frame-rate (30 fps) (CAS(ME)2) dataset. On unseen MEGC2022 challenge dataset, the baseline results are 0.1176 on SAMM Challenge dataset, 0.1739 on CAS(ME)3 and overall performance of 0.1531 on both dataset.

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arXiv2022

V-LinkNet: Learning Contextual Inpainting Across Latent Space of Generative Adversarial Network

Image inpainting is a key technique in image processing task to predict the missing regions and generate realistic images. Given the advancement of existing generative inpainting models with feature extraction, propagation and reconstruction capabilities, there is lack of high-quality feature extraction and transfer mechanisms in deeper layers to tackle persistent aberrations on the generated inpainted regions. Our method, V-LinkNet, develops high-level feature transference to deep level textural context of inpainted regions our work, proposes a novel technique of combining encoders learning through a recursive residual transition layer (RSTL). The RSTL layer easily adapts dual encoders by increasing the unique semantic information through direct communication. By collaborating the dual encoders structure with contextualised feature representation loss function, our system gains the ability to inpaint with high-level features. To reduce biases from random mask-image pairing, we introduce a standard protocol with paired mask-image on the testing set of CelebA-HQ, Paris Street View and Places2 datasets. Our results show V-LinkNet performed better on CelebA-HQ and Paris Street View using this standard protocol. We will share the standard protocol and our codes with the research community upon acceptance of this paper.

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arXiv2022

Deep Learning Methods and Applications for Region of Interest Detection in Dermoscopic Images

Rapid growth in the development of medical imaging analysis technology has been propelled by the great interest in improving computer-aided diagnosis and detection (CAD) systems for three popular image visualization tasks: classification, segmentation, and Region of Interest (ROI) detection. However, a limited number of datasets with ground truth annotations are available for developing segmentation and ROI detection of lesions, as expert annotations are laborious and expensive. Detecting the ROI is vital to locate lesions accurately. In this paper, we propose the use of two deep object detection meta-architectures (Faster R-CNN Inception-V2 and SSD Inception-V2) to develop robust ROI detection of skin lesions in dermoscopic datasets (2017 ISIC Challenge, PH2, and HAM10000), and compared the performance with state-of-the-art segmentation algorithm (DeeplabV3+). To further demonstrate the potential of our work, we built a smartphone application for real-time automated detection of skin lesions based on this methodology. In addition, we developed an automated natural data-augmentation method from ROI detection to produce augmented copies of dermoscopic images, as a pre-processing step in the segmentation of skin lesions to further improve the performance of the current state-of-the-art deep learning algorithm. Our proposed ROI detection has the potential to more appropriately streamline dermatology referrals and reduce unnecessary biopsies in the diagnosis of skin cancer.

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arXiv2022

Development of Diabetic Foot Ulcer Datasets: An Overview

This paper provides conceptual foundation and procedures used in the development of diabetic foot ulcer datasets over the past decade, with a timeline to demonstrate progress. We conduct a survey on data capturing methods for foot photographs, an overview of research in developing private and public datasets, the related computer vision tasks (detection, segmentation and classification), the diabetic foot ulcer challenges and the future direction of the development of the datasets. We report the distribution of dataset users by country and year. Our aim is to share the technical challenges that we encountered together with good practices in dataset development, and provide motivation for other researchers to participate in data sharing in this domain.

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