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Sambit Das

Publications and source records attributed to Sambit Das.

17 recordsLinked to original sources

Large-scale pseudopotential density functional theory calculations using orthogonalized enriched finite element basis

We present an efficient and scalable computational framework for pseudopotential Kohn-Sham density functional theory (KS-DFT) calculations using an enriched finite element (EFE) basis. The EFE basis is formed by augmenting the classical finite element (CFE) basis with compact atom-centered functions, which we term enrichment functions. The key idea is to combine the completeness of a finite element basis with the efficiency of an atom-centered basis. We orthogonalize the enrichment functions with respect to the underlying CFE basis to simultaneously improve the conditioning of the EFE basis and the efficiency of evaluating the inverse of the overlap matrix. To efficiently solve the Kohn-Sham eigenvalue problem, we employ a residual-based Chebyshev subspace iteration approach that is tolerant to approximations in the evaluation of the inverse of the overlap matrix. We demonstrate the accuracy of the framework as compared to the widely available DFT packages. For benchmark non-periodic calculations, ranging up to 39,083 electrons, the EFE basis offers a $5-7\times$ reduction in degrees of freedom over the CFE basis. As a result of this, EFE achieves a $5-9\times$ reduction in computational cost over the CFE basis. The EFE basis also provides a $4-5\times$ reduction in the required memory compared to the CFE basis, thus allowing for optimal utilization of computational resources. Finally, we demonstrate that the EFE basis affords good parallel scalability. Overall, the EFE basis offers a systematically convergent, fast, scalable, resource-efficient basis for pseudopotential DFT calculations.

cond-mat.mtrl-sci

Towards exascale fully relativistic pseudopotential density functional theory calculations enabled by mixed-precision computation and compressed-communication using residual based subspace iteration

Materials exhibiting noncollinear magnetism or strong spin-orbit-coupling underpin many spintronic and topological applications, but their simulations require complex two-component spinors and costs substantially more than scalar density functional theory (DFT). We present a GPU-centric exascale finite-element DFT framework with noncollinear magnetism and spin-orbit-coupling, combining (i) adaptive higher-order finite-element discretization, (ii) a matrix-free Poisson solver, (iii) residual-based Chebyshev filtered subspace iteration (R-ChFSI) for sparse generalized eigenproblems, (iv) R-ChFSI-enabled mixed precision computation with block floating-point compressed MPI communication, and (v) communication-efficient band partitioning. R-ChFSI permits inexact matrix-multivector products and $4\times$--$6.4\times$ compression of communicated data relative to FP64 while preserving double-precision robustness and reducing computation and data movement. Results demonstrate strong scaling on Aurora and Frontier, with up to $3.4\times$ faster Chebyshev filtering. On Aurora, total self-consistent-field (SCF) solve wall time reduces by $2\times$. An 800-node (9,600-GPU) calculation demonstrates fully relativistic pseudopotential DFT for $\sim$80,000 electrons in under 7 minutes per SCF iteration.

cond-mat.mtrl-sci

Intrinsic ductility enhancement in Mg alloys elucidated via large-scale ab-initio calculations

Magnesium is the lightest structural alloy, yet its practical use is limited by its low ductility. Recent studies suggest ductility enhancement in dilute Mg alloys may stem from favorable solute modification of pyramidal I/II screw dislocation core energy difference, activating slip via a double cross-slip mechanism. This work conducts large-scale DFT calculations, reaching ~6,000 atoms, of dislocation energetics in Mg and Mg-Y/Zn alloys. We find that relative solute strengthening effects on pyramidal I and II screw dislocation glide are crucial for cross-slip enhancement in Mg-Y, in contrast to prior investigations, that find solute-mediated dislocation-core energy modification as the main driver. Our predictions align with single- and poly-crystal experimental results and also capture the transition from pyramidal II to I preferred slip in Mg-Y.

cond-mat.mtrl-sci

Field theoretic atomistics: Learning thermodynamic and variational surrogate to density functional theory

The Hohenberg-Kohn (HK) theorem -- the bedrock of density functional theory (DFT) -- establishes a universal map from the external potential to the energy. It also relates the electron density and atomic forces to the variation of the energy with the external potential. But the HK map is rarely utilized in atomistics, wherein interatomic potentials are defined using the molecular or crystal structure rather than the external potential. As a break from this tradition, we present a field theoretic atomistics framework where the external potential assumes the central quantity. We machine learn the HK energy map while satisfying the thermodynamic limit. Further, we obtain both forces and electron density from the variation of the HK energy map, that are exact relations. Our models attain good accuracy across diverse benchmarks and compete with state-of-the-art machine learned interatomic potentials. Through electron density, we predict accurate dipole and quadrupole moments, otherwise nontrivial for interatomic potentials. Our formulation paves the way for a scalable electronic structure surrogate to DFT.

physics.chem-ph

An Atomic Cluster Expansion Potential for Twisted Multilayer Graphene

Twisted multilayer graphene, characterized by its moir\'e patterns arising from inter-layer rotational misalignment, serves as a rich platform for exploring quantum phenomena. Machine learning interatomic potentials (MLIPs) are a promising approach to model such systems. Our work develops a method to generate training and test datasets for fitting MLIPs that capture all possible misalignments but remain small-scale to facilitate efficient data generation and parameter estimation. To achieve this, we generate configurations with periodic boundary conditions suitable for DFT calculations, and then introduce an internal twist and shift within those supercell structures. Using this technique, supplemented with an active learning workflow, we fit an Atomic Cluster Expansion potential for simulating twisted multilayer graphene and test it for accuracy and robustness on a range of simulation tasks.

physics.comp-ph

Fast and scalable finite-element based approach for density functional theory calculations using projector-augmented wave method

In this work, we present a computationally efficient methodology that utilizes a local real-space formulation of the projector augmented wave (PAW) method discretized with a finite-element (FE) basis to enable accurate and large-scale electronic structure calculations. To the best of our knowledge, this is the first real-space approach for DFT calculations, combining the efficiency of PAW formalism involving smooth electronic fields with the ability of systematically improvable higher-order finite-element basis to achieve significant computational gains. In particular, we have developed efficient strategies for solving the underlying FE discretized PAW generalized eigenproblem by employing the Chebyshev filtered subspace iteration approach to compute the desired eigenspace in each self-consistent field iteration. These strategies leverage the low-rank perturbation of the FE basis overlap matrix in conjunction with reduced order quadrature rules to invert the discretized PAW overlap matrix while also exploiting the sparsity of both the local and non-local parts of the discretized PAW Hamiltonian and overlap matrices. Using the proposed approach, we benchmark the accuracy and performance on various representative examples involving periodic and non-periodic systems with plane-wave-based PAW implementations. Furthermore, we also demonstrate a considerable computational advantage ($\sim$ 5$\times$ -- 10$\times$) over state-of-the-art plane-wave methods for medium to large-scale systems ($\sim$ 6,000 -- 35,000 electrons). Finally, we show that our approach (PAW-FE) significantly reduces the degrees of freedom to achieve the desired accuracy, thereby enabling large-scale DFT simulations ($>$ 50,000 electrons) at an order of magnitude lower computational cost compared to norm-conserving pseudopotential calculations using finite-element discretized calculations.

physics.comp-ph

Quasicrystal bulk and surface energies from density functional theory

Are quasicrystals stable or metastable? Density functional theory (DFT) is often used to evaluate thermodynamic stability, but quasicrystals are long-range aperiodic and their energies cannot be calculated using conventional ab initio methods. Here, we perform first-principles calculations on quasicrystal nanoparticles of increasing sizes, from which we can directly extrapolate their bulk and surface energies. Using this technique, we determine with high confidence that the icosahedral quasicrystals ScZn7.33 and YbCd5.7 are ground-state phases--revealing that translational symmetry is not a necessary condition for the T = 0 K stability of inorganic solids. Although we find the ScZn7.33 quasicrystal to be thermodynamically stable, we show on a mixed thermodynamic and kinetic phase diagram that its solidification from the melt is nucleation-limited, which illustrates why even stable materials may be kinetically challenging to grow. Our techniques here broadly open the door to first-principles investigations into the structure-bonding-stability relationships of aperiodic materials.

cond-mat.mtrl-sci

MiMiC: A High-Performance Framework for Multiscale Molecular Dynamics Simulations

MiMiC is a framework for performing multiscale simulations in which loosely coupled external programs describe individual subsystems at different resolutions and levels of theory. To make it highly efficient and flexible, we adopt an interoperable approach based on a multiple-program multiple-data (MPMD) paradigm, serving as an intermediary responsible for fast data exchange and interactions between the subsystems. The main goal of MiMiC is to avoid interfering with the underlying parallelization of the external programs, including the operability on hybrid architectures (e.g., CPU/GPU), and keep their setup and execution as close as possible to the original. At the moment, MiMiC offers an efficient implementation of electrostatic embedding QM/MM that has demonstrated unprecedented parallel scaling in simulations of large biomolecules using CPMD and GROMACS as QM and MM engines, respectively. However, as it is designed for high flexibility with general multiscale models in mind, it can be straightforwardly extended beyond QM/MM. In this article, we illustrate the software design and the features of the framework, which make it a compelling choice for multiscale simulations in the upcoming era of exascale high-performance computing.

physics.chem-ph

Tucker tensor approach for accelerating exchange computations in a real-space finite-element discretization of generalized Kohn-Sham density functional theory

The evaluation of Fock exchange is often the computationally most expensive part of hybrid functional density functional theory calculations in a systematically improvable, complete basis. In this work, we employ a Tucker tensor based approach that substantially accelerates the evaluation of the action of Fock exchange by transforming 3-dimensional convolutional integrals into a tensor product of 1-dimensional convolution integrals. Our numerical implementation uses a parallelization strategy that balances the memory and communication bottlenecks, alongside overalapping compute and communication operations to enhance computational efficiency and parallel scalability. The accuracy and computational efficiency is demonstrated on various systems, including Pt clusters of various sizes and a $\text{TiO}_{\text{2}}$ cluster with 3,684 electrons.

cond-mat.mtrl-sci

Accelerating self-consistent field iterations in Kohn-Sham density functional theory using a low rank approximation of the dielectric matrix

We present an efficient preconditioning technique for accelerating the fixed point iteration in real-space Kohn-Sham density functional theory (DFT) calculations. The preconditioner uses a low rank approximation of the dielectric matrix (LRDM) based on G\^ateaux derivatives of the residual of fixed point iteration along appropriately chosen direction functions. We develop a computationally efficient method to evaluate these G\^ateaux derivatives in conjunction with the Chebyshev filtered subspace iteration procedure, an approach widely used in large-scale Kohn-Sham DFT calculations. Further, we propose a variant of LRDM preconditioner based on adaptive accumulation of low-rank approximations from previous SCF iterations, and also extend the LRDM preconditioner to spin-polarized Kohn-Sham DFT calculations. We demonstrate the robustness and efficiency of the LRDM preconditioner against other widely used preconditioners on a range of benchmark systems with sizes ranging from $\sim$ 100-1100 atoms ($\sim$ 500--20,000 electrons). The benchmark systems include various combinations of metal-insulating-semiconducting heterogeneous material systems, nanoparticles with localized $d$ orbitals near the Fermi energy, nanofilm with metal dopants, and magnetic systems. In all benchmark systems, the LRDM preconditioner converges robustly within 20--30 iterations. In contrast, other widely used preconditioners show slow convergence in many cases, as well as divergence of the fixed point iteration in some cases. Finally, we demonstrate the computational efficiency afforded by the LRDM method, with up to 3.4$\times$ reduction in computational cost for the total ground-state calculation compared to other preconditioners.

cond-mat.mtrl-sci

Roadmap on Electronic Structure Codes in the Exascale Era

Electronic structure calculations have been instrumental in providing many important insights into a range of physical and chemical properties of various molecular and solid-state systems. Their importance to various fields, including materials science, chemical sciences, computational chemistry and device physics, is underscored by the large fraction of available public supercomputing resources devoted to these calculations. As we enter the exascale era, exciting new opportunities to increase simulation numbers, sizes, and accuracies present themselves. In order to realize these promises, the community of electronic structure software developers will however first have to tackle a number of challenges pertaining to the efficient use of new architectures that will rely heavily on massive parallelism and hardware accelerators. This roadmap provides a broad overview of the state-of-the-art in electronic structure calculations and of the various new directions being pursued by the community. It covers 14 electronic structure codes, presenting their current status, their development priorities over the next five years, and their plans towards tackling the challenges and leveraging the opportunities presented by the advent of exascale computing.

cond-mat.mtrl-sci

DFT-FE 1.0: A massively parallel hybrid CPU-GPU density functional theory code using finite-element discretization

We present DFT-FE 1.0, building on DFT-FE 0.6 [Comput. Phys. Commun. 246, 106853 (2020)], to conduct fast and accurate large-scale density functional theory (DFT) calculations (reaching ~ $100,000$ electrons) on both many-core CPU and hybrid CPU-GPU computing architectures. This work involves improvements in the real-space formulation -- via an improved treatment of the electrostatic interactions that substantially enhances the computational efficiency -- as well high-performance computing aspects, including the GPU acceleration of all the key compute kernels in DFT-FE. We demonstrate the accuracy by comparing the ground-state energies, ionic forces and cell stresses on a wide-range of benchmark systems against those obtained from widely used DFT codes. Further, we demonstrate the numerical efficiency of our implementation, which yields $\sim 20 \times$ CPU-GPU speed-up by using GPU acceleration on hybrid CPU-GPU nodes. Notably, owing to the parallel-scaling of the GPU implementation, we obtain wall-times of $80-140$ seconds for full ground-state calculations, with stringent accuracy, on benchmark systems containing ~ $6,000-15,000$ electrons.

physics.comp-ph

Li$_x$CoO$_2$ phase stability studied by machine learning-enabled scale bridging between electronic structure, statistical mechanics and phase field theories

Li$_xTM$O$_2$ (TM={Ni, Co, Mn}) are promising cathodes for Li-ion batteries, whose electrochemical cycling performance is strongly governed by crystal structure and phase stability as a function of Li content at the atomistic scale. Here, we use Li$_x$CoO$_2$ (LCO) as a model system to benchmark a scale-bridging framework that combines density functional theory (DFT) calculations at the atomistic scale with phase field modeling at the continuum scale to understand the impact of phase stability on microstructure evolution. This scale bridging is accomplished by incorporating traditional statistical mechanics methods with integrable deep neural networks, which allows formation energies for specific atomic configurations to be coarse-grained and incorporated in a neural network description of the free energy of the material. The resulting realistic free energy functions enable atomistically informed phase-field simulations. These computational results allow us to make connections to experimental work on LCO cathode degradation as a function of temperature, morphology and particle size.

cond-mat.mtrl-sci

DFT-FE -- A massively parallel adaptive finite-element code for large-scale density functional theory calculations

We present an accurate, efficient and massively parallel finite-element code, DFT-FE, for large-scale ab-initio calculations (reaching $\sim 100,000$ electrons) using Kohn-Sham density functional theory (DFT). DFT-FE is based on a local real-space variational formulation of the Kohn-Sham DFT energy functional that is discretized using a higher-order adaptive spectral finite-element (FE) basis, and treats pseudopotential and all-electron calculations in the same framework, while accommodating non-periodic, semi-periodic and periodic boundary conditions. We discuss the main aspects of the code, which include, the various strategies of adaptive FE basis generation, and the different approaches employed in the numerical implementation of the solution of the discrete Kohn-Sham problem that are focused on significantly reducing the floating point operations, communication costs and latency. We demonstrate the accuracy of DFT-FE by comparing the energies, ionic forces and periodic cell stresses on a wide range of problems with popularly used DFT codes. Further, we demonstrate that DFT-FE significantly outperforms widely used plane-wave codes---both in CPU-times and wall-times, and on both non-periodic and periodic systems---at systems sizes beyond a few thousand electrons, with over $5-10$ fold speedups in systems with more than 10,000 electrons. The benchmark studies also highlight the excellent parallel scalability of DFT-FE, with strong scaling demonstrated on up to 192,000 MPI tasks.

physics.comp-ph

Origins of the transformability of Nickel-Titanium shape memory alloys

The near equiatomic NiTi alloy is the most successful shape memory alloy by a large margin. It is widely and increasingly used in biomedical devices. Yet, despite having a repeatable superelastic effect and excellent shape-memory, NiTi is very far from satisfying the conditions that characterize the most reversible phase transforming materials. Thus, the scientific reasons underlying its vast success present an enigma. In this work, we perform rigorous mathematical derivation and accurate DFT calculation of transformation mechanisms to seek previously unrecognized twin-like defects that we term involution domains, and we observe them in real space in NiTi by the aberration-corrected scanning transmission electron microscopy. Involution domains lead to an additional 216 compatible interfaces between phases in NiTi, and we theorize that this feature contributes importantly to its reliability. They are expected to arise in other transformations and to alter the conventional interpretation of the mechanism of the martensitic transformation.

cond-mat.mtrl-sci

Electronic structure study of screw dislocation core energetics in Aluminum and core energetics informed forces in a dislocation aggregate

We use a real-space formulation of orbital-free DFT to study the core energetics and core structure of an isolated screw dislocation in Aluminum. Using a direct energetics based approach, we estimate the core size of a perfect screw dislocation to be $\approx$ 7 $|{\bf b}|$, which is considerably larger than previous estimates of $1-3~|{\bf b}|$ based on displacement fields. The perfect screw upon structural relaxation dissociates into two Shockley partials with partial separation distances of 8.2 \AA~and 6.6 \AA~ measured from the screw and edge component differential displacement plots, respectively. Similar to a previous electronic structure study on edge dislocation, we find that the core energy of the relaxed screw dislocation is strongly dependent on macroscopic deformations. Next, we use the edge and screw dislocation core energetics data with physically reasonable assumptions to develop a continuum energetics model for an aggregate of dislocations. Further, we use this model in a discrete dislocation network, and from the variations of the core energy with respect to the nodal positions of the network, we obtain the nodal core force which can directly be incorporated into discrete dislocation dynamics frameworks. We analyze and classify the nodal core force into three different contributions based on their decay behavior. Two of these contributions to the core force, both arising from the core energy dependence on macroscopic deformations, are not accounted for in currently used discrete dislocation dynamics models which assume the core energy to be a constant. Using case studies involving simple dislocation structures, we demonstrate that the contribution to the core force from the core energy dependence on macroscopic deformations can be significant in comparison to the elastic Peach-Koehler force even up to distances of $10-15$ nm between dislocation structures.

cond-mat.mtrl-sci

Real-space formulation of orbital-free density functional theory using finite-element discretization: The case for Al, Mg, and Al-Mg intermetallics

We propose a local real-space formulation for orbital-free DFT with density dependent kinetic energy functionals and a unified variational framework for computing the configurational forces associated with geometry optimization of both internal atomic positions as well as the cell geometry. The proposed real-space formulation, which involves a reformulation of the extended interactions in electrostatic and kinetic energy functionals as local variational problems in auxiliary potential fields, also readily extends to all-electron orbital-free DFT calculations that are employed in warm dense matter calculations. We use the local real-space formulation in conjunction with higher-order finite-element discretization to demonstrate the accuracy of orbital-free DFT and the proposed formalism for the Al-Mg materials system, where we obtain good agreement with Kohn-Sham DFT calculations on a wide range of properties and benchmark calculations. Finally, we investigate the cell-size effects in the electronic structure of point defects, in particular a mono-vacancy in Al. We unambiguously demonstrate that the cell-size effects observed from vacancy formation energies computed using periodic boundary conditions underestimate the extent of the electronic structure perturbations created by the defect. On the contrary, the bulk Dirichlet boundary conditions, accessible only through the proposed real-space formulation, which correspond to an isolated defect embedded in the bulk, show cell-size effects in the defect formation energy that are commensurate with the perturbations in the electronic structure. Our studies suggest that even for a simple defect like a vacancy in Al, we require cell-sizes of $\sim 10^3$ atoms for convergence in the electronic structure.

cond-mat.mtrl-sci