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Sean Lim

Publications and source records attributed to Sean Lim.

4 recordsLinked to original sources

Predicting Quantifiability from Primary Screens to Prioritize Dose-Response Profiling

High-throughput drug screening relies on low-cost primary assays to prioritize compounds for more expensive dose-response profiling, where potency is ultimately quantified. Current screening strategies largely focus on identifying compounds that will confirm biological activity on follow-up, implicitly assuming that confirmed activity will also yield a usable potency estimate. However, confirmed biological activity in screening does not necessarily translate into a quantifiable potency, because active compounds can still fail to produce a reportable dose-response estimate. We therefore present a framework for modeling quantifiability, whether follow-up testing will yield a usable potency estimate, as a distinct triage objective from biological activity. Quantifiability was strongly predictable from the preceding low-cost screen, with most predictive information arising from the observed screening features rather than molecular structure. Response-based predictors remained robust on previously unseen chemical scaffolds and generalized across held-out assay-mechanism families, while the probability of successful quantification varied strongly with response amplitude and assay context. These findings establish experimental measurability, distinct from biological activity, as a predictable property of screening outcomes and show that quantifiability-aware triage can improve the allocation of costly dose-response profiling capacity.

cs.LG

Me, Myself, and $\pi$ : Evaluating and Explaining LLM Introspection

A hallmark of human intelligence is Introspection-the ability to assess and reason about one's own cognitive processes. Introspection has emerged as a promising but contested capability in large language models (LLMs). However, current evaluations often fail to distinguish genuine meta-cognition from the mere application of general world knowledge or text-based self-simulation. In this work, we propose a principled taxonomy that formalizes introspection as the latent computation of specific operators over a model's policy and parameters. To isolate the components of generalized introspection, we present Introspect-Bench, a multifaceted evaluation suite designed for rigorous capability testing. Our results show that frontier models exhibit privileged access to their own policies, outperforming peer models in predicting their own behavior. Furthermore, we provide causal, mechanistic evidence explaining both how LLMs learn to introspect without explicit training, and how the mechanism of introspection emerges via attention diffusion.

cs.AI

PALMS: A Computational Implementation for Pavlovian Associative Learning Models' Simulation

In contrast to static formalisms, computational definitions describe the operational mechanisms of a model. Simulations are an essential part of the cycle of theory development and refinement, assisting researchers in formulating the precise definitions that models require, and making accurate predictions. This manuscript introduces a computational implementation of Pavlovian learning models in a Python environment, termed Pavlovian Associative Learning Models' Simulation (PALMS). In addition to the canonical Rescorla-Wagner model, attentional approaches are implemented, including Pearce-Kaye-Hall, Mackintosh Extended, Le Pelley's Hybrid, and a novel extension of the Rescorla-Wagner model featuring a unified variable learning rate that synthesises Mackintosh's and Pearce and Hall's opposing conceptualisations. To our knowledge, only the first attentional model has been previously specified computationally in a general design tool. PALMS integrates a graphical interface that permits the input of entire experimental designs in an alphanumeric format, akin to that used by experimental neuroscientists. It uniquely enables the simulation of experiments involving hundreds of stimuli, such as those used with human participants, and the computation of configural cues and configural-cue compounds across all models, thereby substantially broadening their predictive capabilities. A comprehensive description of the models' implementation is provided in the paper. We evaluate PALMS by simulating five published experiments in the associative learning literature that assessed the predictive scope of existing models, and we show that this implementation provides neuroscientists with a useful tool for identifying critical variables, refining experimental designs, making precise predictions, comparing model fitness, and formulating new theoretical approaches.

cs.LG

Direct Hydrogen Production from Water/Seawater by Irradiation/Vibration-Activated Using Defective Ferroelectric BaTiO3-x Nanoparticles

Hydrogen is a promising fossil-fuel alternative fuel owing to its environmentally neutral emissions and high energy density. However, the need for purified water and external power are critical hindrances to implementation of hydrogen production. The present work reveals the potential to overcome these shortcomings through piezo-photocatalysis of seawater using BaTiO3-x (BTO) nanoparticles. This material was made piezoelectrically active by annealing under different atmospheres, including O2, N2, Ar, and H2, the latter of which caused Ti4+ to Ti(4-x)+ multiple reductions and structural expansions that stabilized piezoelectric tetragonal BTO domains. The resultant defect equilibria combine ionic and electron effects, including Ti redox reactions, charge-compensating surface oxygen vacancy formation, and color centre alterations. Further, variety of experimental techniques revealed the effects of reduction on the energy band structure. A strong piezoelectric effect and the presence of self-polarization were confirmed by piezoresponse force microscopy, while simulation work clarified the role of vibration on band bending deriving from the former. The performance data contrasted H2 evolution using deionized (DI) water, simulated seawater, and natural seawater subjected to photocatalysis, piezocatalysis, and piezo-photocatalysis. An efficient H2 evolution rate of 132.4 micromol/g/h was achieved from DI water using piezo-photocatalysis for 5 h. In contrast, piezocatalysis for 2 h followed by piezo-photocatalysis for 3 h resulted in H2 evolution rates of 100.7 micromol/g/h for DI water, 63.4 micromol/g/h for simulated seawater, and 48.7 micromol/g/h for natural seawater. This work provides potential new strategies for large-scale green H2 production using abundant natural resources with conventional piezoelectric material while leveraging the effects of ions dissolved in seawater.

cond-mat.mtrl-sci