arXiv subjects

Shang Wu

Publications and source records attributed to Shang Wu.

39 records · Page 3Linked to original sources

arXiv2022

Rapid detection and recognition of whole brain activity in a freely behaving Caenorhabditis elegans

Advanced volumetric imaging methods and genetically encoded activity indicators have permitted a comprehensive characterization of whole brain activity at single neuron resolution in \textit{Caenorhabditis elegans}. The constant motion and deformation of the nematode nervous system, however, impose a great challenge for consistent identification of densely packed neurons in a behaving animal. Here, we propose a cascade solution for long-term and rapid recognition of head ganglion neurons in a freely moving \textit{C. elegans}. First, potential neuronal regions from a stack of fluorescence images are detected by a deep learning algorithm. Second, 2-dimensional neuronal regions are fused into 3-dimensional neuron entities. Third, by exploiting the neuronal density distribution surrounding a neuron and relative positional information between neurons, a multi-class artificial neural network transforms engineered neuronal feature vectors into digital neuronal identities. With a small number of training samples, our bottom-up approach is able to process each volume - $1024 \times 1024 \times 18$ in voxels - in less than 1 second and achieves an accuracy of $91\%$ in neuronal detection and above $80\%$ in neuronal tracking over a long video recording. Our work represents a step towards rapid and fully automated algorithms for decoding whole brain activity underlying naturalistic behaviors.

q-bio.QM↗

arXiv2022

e-G2C: A 0.14-to-8.31 $μ$J/Inference NN-based Processor with Continuous On-chip Adaptation for Anomaly Detection and ECG Conversion from EGM

This work presents the first silicon-validated dedicated EGM-to-ECG (G2C) processor, dubbed e-G2C, featuring continuous lightweight anomaly detection, event-driven coarse/precise conversion, and on-chip adaptation. e-G2C utilizes neural network (NN) based G2C conversion and integrates 1) an architecture supporting anomaly detection and coarse/precise conversion via time multiplexing to balance the effectiveness and power, 2) an algorithm-hardware co-designed vector-wise sparsity resulting in a 1.6-1.7$\times$ speedup, 3) hybrid dataflows for enhancing near 100% utilization for normal/depth-wise(DW)/point-wise(PW) convolutions (Convs), and 4) an on-chip detection threshold adaptation engine for continuous effectiveness. The achieved 0.14-8.31 $μ$J/inference energy efficiency outperforms prior arts under similar complexity, promising real-time detection/conversion and possibly life-critical interventions

eess.SP↗

arXiv2022

LDP: Learnable Dynamic Precision for Efficient Deep Neural Network Training and Inference

Low precision deep neural network (DNN) training is one of the most effective techniques for boosting DNNs' training efficiency, as it trims down the training cost from the finest bit level. While existing works mostly fix the model precision during the whole training process, a few pioneering works have shown that dynamic precision schedules help DNNs converge to a better accuracy while leading to a lower training cost than their static precision training counterparts. However, existing dynamic low precision training methods rely on manually designed precision schedules to achieve advantageous efficiency and accuracy trade-offs, limiting their more comprehensive practical applications and achievable performance. To this end, we propose LDP, a Learnable Dynamic Precision DNN training framework that can automatically learn a temporally and spatially dynamic precision schedule during training towards optimal accuracy and efficiency trade-offs. It is worth noting that LDP-trained DNNs are by nature efficient during inference. Furthermore, we visualize the resulting temporal and spatial precision schedule and distribution of LDP trained DNNs on different tasks to better understand the corresponding DNNs' characteristics at different training stages and DNN layers both during and after training, drawing insights for promoting further innovations. Extensive experiments and ablation studies (seven networks, five datasets, and three tasks) show that the proposed LDP consistently outperforms state-of-the-art (SOTA) low precision DNN training techniques in terms of training efficiency and achieved accuracy trade-offs. For example, in addition to having the advantage of being automated, our LDP achieves a 0.31\% higher accuracy with a 39.1\% lower computational cost when training ResNet-20 on CIFAR-10 as compared with the best SOTA method.

cs.LG↗