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Shuo Zhang

Publications and source records attributed to Shuo Zhang.

At least 109 records · Page 6Linked to original sources

LiNUS: Lightweight Automatic Segmentation of Deep Brain Nuclei for Real-Time DBS Surgery

This paper proposes LiNUS, a lightweight deep learning framework for the automatic segmentation of the Subthalamic Nucleus (STN) in Deep Brain Stimulation (DBS) surgery. Addressing the challenges of small target volume and class imbalance in MRI data, LiNUS improves upon the U-Net architecture by introducing spectral normalization constraints, bilinear interpolation upsampling, and a multi-scale feature fusion mechanism. Experimental results on the Tsinghua DBS dataset (TT14) demonstrate that LiNUS achieves a Dice coefficient of 0.679 with an inference time of only 0.05 seconds per subject, significantly outperforming traditional manual and registration-based methods. Further validation on high-resolution data confirms the model's robustness, achieving a Dice score of 0.89. A dedicated Graphical User Interface (GUI) was also developed to facilitate real-time clinical application.

eess.IV↗

ABC-Bench: Benchmarking Agentic Backend Coding in Real-World Development

The evolution of Large Language Models (LLMs) into autonomous agents has expanded the scope of AI coding from localized code generation to complex, repository-level, and execution-driven problem solving. However, current benchmarks predominantly evaluate code logic in static contexts, neglecting the dynamic, full-process requirements of real-world engineering, particularly in backend development which demands rigorous environment configuration and service deployment. To address this gap, we introduce ABC-Bench, a benchmark explicitly designed to evaluate agentic backend coding within a realistic, executable workflow. Using a scalable automated pipeline, we curated 224 practical tasks spanning 8 languages and 19 frameworks from open-source repositories. Distinct from previous evaluations, ABC-Bench require the agents to manage the entire development lifecycle from repository exploration to instantiating containerized services and pass the external end-to-end API tests. Our extensive evaluation reveals that even state-of-the-art models struggle to deliver reliable performance on these holistic tasks, highlighting a substantial disparity between current model capabilities and the demands of practical backend engineering. Our code is available at https://github.com/OpenMOSS/ABC-Bench.

cs.SE↗

MemGovern: Enhancing Code Agents through Learning from Governed Human Experiences

While autonomous software engineering (SWE) agents are reshaping programming paradigms, they currently suffer from a "closed-world" limitation: they attempt to fix bugs from scratch or solely using local context, ignoring the immense historical human experience available on platforms like GitHub. Accessing this open-world experience is hindered by the unstructured and fragmented nature of real-world issue-tracking data. In this paper, we introduce MemGovern, a framework designed to govern and transform raw GitHub data into actionable experiential memory for agents. MemGovern employs experience governance to convert human experience into agent-friendly experience cards and introduces an agentic experience search strategy that enables logic-driven retrieval of human expertise. By producing 135K governed experience cards, MemGovern achieves a significant performance boost, improving resolution rates on the SWE-bench Verified by 4.65%. As a plug-in approach, MemGovern provides a solution for agent-friendly memory infrastructure.

cs.SE↗

Sphinx: Benchmarking and Modeling for LLM-Driven Pull Request Review

Pull request (PR) review is essential for ensuring software quality, yet automating this task remains challenging due to noisy supervision, limited contextual understanding, and inadequate evaluation metrics. We present Sphinx, a unified framework for LLM-based PR review that addresses these limitations through three key components: (1) a structured data generation pipeline that produces context-rich, semantically grounded review comments by comparing pseudo-modified and merged code; (2) a checklist-based evaluation benchmark that assesses review quality based on structured coverage of actionable verification points, moving beyond surface-level metrics like BLEU; and (3) Checklist Reward Policy Optimization (CRPO), a novel training paradigm that uses rule-based, interpretable rewards to align model behavior with real-world review practices. Extensive experiments show that models trained with Sphinx achieve state-of-the-art performance on review completeness and precision, outperforming both proprietary and open-source baselines by up to 40\% in checklist coverage. Together, Sphinx enables the development of PR review models that are not only fluent but also context-aware, technically precise, and practically deployable in real-world development workflows. The data will be released after review.

cs.SE↗

Resolving the Fe K$α$ Doublet of the Galactic Center Molecular Cloud G0.11-0.11 with XRISM

Fe K$α$ line emission from Galactic center molecular clouds can be produced either via fluorescence after illumination by an X-ray source or by cosmic ray ionization. Unparalleled high-resolution X-ray spectroscopy obtained by XRISM-Resolve for the galactic center molecular cloud G0.11-0.11 resolves its Fe K$α$ line complex for the first time, and points to a new method for discrimination between the X-ray reflection and cosmic ray ionization models. The Fe K$α$ line complex is resolved into Fe K$α_1$ at $E_{1} = 6.4040 \: \rm{keV}$ and Fe K$α_2$ at $E_{2}= 6.3910 \:\rm{keV}$. Both lines have non-instrumental FWHM of $\approx 3 \:\rm{eV}$, close to the predicted quantum mechanical width of the lines, suggesting scant other sources of line broadening other than instrumental and quantum effects. We measure a radial velocity of $v_{\rm{LSR}} = 50 \pm 12_{fit} \pm 14_{scale} \:\rm{km/s}$ for G0.11-0.11, achieving the same precision reached by radio observations of such clouds. The high-resolution spectrum tests for the presence of secondary Fe K$α$ lines, expected as a signature of cosmic ray proton/ion ionization. The absence of the secondary lines argues against the cosmic ray ionization model for G0.11-0.11. In the preferred X-ray reflection model, if the illuminating source is Sgr A$^{\star}$, the required luminosity for an X-ray outburst about 200 years ago is $L_8 \approx 10^{38} \:\rm{erg/s}$ in an $8\:\rm{keV}$-wide band at $8\:\rm{keV}$.

astro-ph.HE↗

The very faint X-ray transient Swift J174610-290018 at the Galactic center

Very Faint X-ray Transients (VFXTs) are a class of X-ray binary systems that exhibit occasional outbursts with peak X-ray luminosities (L_X< 1e36 erg s^-1) much lower than typical X-ray transients. On 22nd February 2024, during its daily Galactic center monitoring, Swift-XRT detected a VFXT, 7 arcmin from Sgr A* dubbing it Swift J174610--290018. We aim to characterize the outburst that occurred in 2024, and a second, distinct outburst in 2025, to understand the nature and accretion flow properties of this new VFXT. Swift-XRT light curves are used to constrain the duration of the two events. We carried out X-ray spectral analysis exploiting XMM and NuSTAR data. We used Chandra and XMM observations of the last 25 years to constrain the quiescent luminosity of the source. During the 2024 outburst, which lasted about 50 days, the source reached a luminosity in the 2-10 keV band of L_X = 1.2e35 erg s^-1 (assuming it is located at the Galactic center). The 2025 outburst is shorter (about 5 days), and reached L_X = 9e34 erg s^-1. The spectral features of the source include an excess at 6.5-7 keV, which can be associated either with a single reflection line or with the ionized Fe XXV and XXVI lines. The same source was identified in both the XMM and Chandra catalogs of point sources (known as 4XMM J174610.7--290020). During previous detections, the source displayed luminosity levels ranging from L_X= 2e32 to L_X = 3e34 erg s^-1 between 2000 and 2010. Moreover, it exhibited a potential type I X-ray burst in 2004. The analysis of the outbursts and the potential type I burst strongly suggests the neutron star low mass X-ray binary (NS-LMXB) nature of the VFXT. The source can be described by an accretion disk corona (as has been recently proposed by the XRISM/Xtend analysis). This scenario explains the overall low luminosity of this transient and the peculiar iron lines in the spectrum.

astro-ph.HE↗

The First X-Ray Polarimetry of an Eclipsing Low-Mass X-Ray Binary: Serendipitous IXPE Observation of AX J1745.6-2901

We present the first X-ray polarimetric measurement of the neutron star low-mass X-ray binary system AX J1745.6-2901 conducted by the Imaging X-ray Polarimetry Explorer (IXPE) satellite. This transient source, located within $ \sim $1.5' of the Galactic center, was observed serendipitously during a MAXI J1744-294 observation with a duration of 150 ks. The complex nature of the region in which AX J1745.6-2901 is located poses a challenge for studying its polarization. By performing a detailed analysis of the contamination from MAXI J1744-294 and the Galactic center diffuse emission, we find the source polarization degree PD = 14.7$\% \pm$ 4.0$\%$ and polarization angle PA = 122$^\circ \pm 8^\circ$. The phase-resolved analysis shows increase in polarization during the eclipse phase, with PD = 34.2$\% \pm$ 8.7$\%$, suggesting that the polarization-inducing mechanisms are of scattering nature, probably originating from disk winds.

astro-ph.HE↗

Refined M-type Star Catalog from LAMOST DR10: Measurements of Radial Velocities, $T_\text{eff}$, log $g$, [M/H] and [$α$/M]

Precise stellar parameters for M-type stars, the Galaxy's most common stellar type, are crucial for numerous studies. In this work, we refined the LAMOST DR10 M-type star catalog through a two-stage process. First, we purified the catalog using techniques including deep learning and color-magnitude diagrams to remove 22,496 non-M spectra, correct 2,078 dwarf/giant classifications, and update 12,900 radial velocities. This resulted in a cleaner catalog containing 870,518 M-type spectra (820,493 dwarfs, 50,025 giants). Second, applying a label transfer strategy using values from APOGEE DR16 for parameter prediction with a ten-fold cross-validated CNN ensemble architecture, we predicted $T_\text{eff}$, $\log g$, [M/H], and [$α$/M] separately for M dwarfs and giants. The average internal errors for M dwarfs/giants are respectively: $T_\text{eff}$ 30/17 K, log $g$ 0.07/0.07 dex, [M/H] 0.07/0.05 dex, and [$α$/M] 0.02/0.02 dex. Comparison with APOGEE demonstrates external precisions of 34/14 K, 0.12/0.07 dex, 0.09/0.04 dex, and 0.03/0.02 dex for M dwarfs/giants, which represents precision improvements of over 20\% for M dwarfs and over 50\% for M giants compared to previous literature results. The catalog is available at https://nadc.china-vo.org/res/r101668/.

astro-ph.SR↗

SeqProFT: Sequence-only Protein Property Prediction with LoRA Finetuning

Protein language models (PLMs) have demonstrated remarkable capabilities in learning relationships between protein sequences and functions. However, finetuning these large models requires substantial computational resources, often with suboptimal task-specific results. This study investigates how parameter-efficient finetuning via LoRA can enhance protein property prediction while significantly reducing computational demands. By applying LoRA to ESM-2 and ESM-C models of varying sizes and evaluating 10 diverse protein property prediction tasks, we demonstrate that smaller models with LoRA adaptation can match or exceed the performance of larger models without adaptation. Additionally, we integrate contact map information through a multi-head attention mechanism, improving model comprehension of structural features. Our systematic analysis reveals that LoRA finetuning enables faster convergence, better performance, and more efficient resource utilization, providing practical guidance for protein research applications in resource-constrained environments. The code is available at https://github.com/jiankliu/SeqProFT.

cs.LG↗

Nex-N1: Agentic Models Trained via a Unified Ecosystem for Large-Scale Environment Construction

The evolution of Large Language Models (LLMs) from passive responders to autonomous agents necessitates a fundamental shift in learning paradigms -- from static imitation to incentive-driven decision making. However, this transition is significantly impeded by the lack of scalable infrastructure capable of constructing high-quality interaction signals for effective policy learning. To address this, we introduce a comprehensive method designed to systematically scale the diversity and complexity of interactive environments. Our method realizes this scaling by addressing three orthogonal dimensions: (1) Complexity: NexAU, a flexible agent framework that supports building complex agent hierarchies via simple configurations; (2) Diversity: NexA4A automatically generates diverse agent hierarchies from natural language to cover infinite domains; and (3) Fidelity: NexGAP bridges the simulation-reality gap by integrating dynamic real-world environment for grounded trajectories synthesis. We train Nex-N1 upon the diverse and complex interactive environments established by our infrastructure. Empirical results on benchmarks such as SWE-bench and tau2 demonstrate that Nex-N1 consistently outperforms SOTA open-source models and achieves competitive performance against frontier proprietary models on complex agentic tasks. We open-source the Nex ecosystem and model weights to facilitate further research.

cs.CL↗

RobustVLA: Robustness-Aware Reinforcement Post-Training for Vision-Language-Action Models

Vision-Language-Action (VLA) models have recently emerged as powerful general-purpose policies for robotic manipulation, benefiting from large-scale multi-modal pre-training. However, they often fail to generalize reliably in out-of-distribution deployments, where unavoidable disturbances such as observation noise, sensor errors, or actuation perturbations become prevalent. While recent Reinforcement Learning (RL)-based post-training provides a practical means to adapt pre-trained VLA models, existing methods mainly emphasize reward maximization and overlook robustness to environmental uncertainty. In this work, we introduce RobustVLA, a lightweight online RL post-training method designed to explicitly enhance the resilience of VLA models. Through a systematic robustness analysis, we identify two key regularizations: Jacobian regularization, which mitigates sensitivity to observation noise, and smoothness regularization, which stabilizes policies under action perturbations. Extensive experiments across diverse robotic environments demonstrate that RobustVLA significantly outperforms prior state-of-the-art methods in robustness and reliability. Our results highlight the importance of principled robustness-aware RL post-training as a key step toward improving the reliability and robustness of VLA models.

cs.RO↗

Measuring the Impact of Lexical Training Data Coverage on Hallucination Detection in Large Language Models

Hallucination in large language models (LLMs) is a fundamental challenge, particularly in open-domain question answering. Prior work attempts to detect hallucination with model-internal signals such as token-level entropy or generation consistency, while the connection between pretraining data exposure and hallucination is underexplored. Existing studies show that LLMs underperform on long-tail knowledge, i.e., the accuracy of the generated answer drops for the ground-truth entities that are rare in pretraining. However, examining whether data coverage itself can serve as a detection signal is overlooked. We propose a complementary question: Does lexical training-data coverage of the question and/or generated answer provide additional signal for hallucination detection? To investigate this, we construct scalable suffix arrays over RedPajama's 1.3-trillion-token pretraining corpus to retrieve $n$-gram statistics for both prompts and model generations. We evaluate their effectiveness for hallucination detection across three QA benchmarks. Our observations show that while occurrence-based features are weak predictors when used alone, they yield modest gains when combined with log-probabilities, particularly on datasets with higher intrinsic model uncertainty. These findings suggest that lexical coverage features provide a complementary signal for hallucination detection. All code and suffix-array infrastructure are provided at https://github.com/WWWonderer/ostd.

cs.CL↗

The Empowerment of Science of Science by Large Language Models: New Tools and Methods

Large language models (LLMs) have exhibited exceptional capabilities in natural language understanding and generation, image recognition, and multimodal tasks, charting a course towards AGI and emerging as a central issue in the global technological race. This manuscript conducts a comprehensive review of the core technologies that support LLMs from a user standpoint, including prompt engineering, knowledge-enhanced retrieval augmented generation, fine tuning, pretraining, and tool learning. Additionally, it traces the historical development of Science of Science (SciSci) and presents a forward looking perspective on the potential applications of LLMs within the scientometric domain. Furthermore, it discusses the prospect of an AI agent based model for scientific evaluation, and presents new research fronts detection and knowledge graph building methods with LLMs.

cs.CL↗

Synergizing Multigrid Algorithms with Vision Transformer: A Novel Approach to Enhance the Seismic Foundation Model

Due to the emergency and homogenization of Artificial Intelligence (AI) technology development, transformer-based foundation models have revolutionized scientific applications, such as drug discovery, materials research, and astronomy. However, seismic data presents unique characteristics that require specialized processing techniques for pretraining foundation models in seismic contexts with high- and low-frequency features playing crucial roles. Existing vision transformers (ViTs) with sequential tokenization ignore the intrinsic pattern and fail to grasp both the high- and low-frequency seismic information efficiently and effectively. This work introduces a novel adaptive two-grid foundation model training strategy (ADATG) with Hilbert encoding specifically tailored for seismogram data, leveraging the hierarchical structures inherent in seismic data. Specifically, our approach employs spectrum decomposition to separate high- and low-frequency components and utilizes hierarchical Hilbert encoding to represent the data effectively. Moreover, observing the frequency principle observed in ViTs, we propose an adaptive training strategy that initially emphasizes coarse-level information and then progressively refines the model's focus on fine-level features. Our extensive experiments demonstrate the effectiveness and efficiency of our training methods. This research highlights the importance of data encoding and training strategies informed by the distinct characteristics of high- and low-frequency features in seismic images, ultimately contributing to the enhancement of visual seismic foundation models pretraining.

cs.CV↗

Advancing IoT System Dependability: A Deep Dive into Management and Operation Plane Separation

We propose to enhance the dependability of large-scale IoT systems by separating the management and operation plane. We innovate the management plane to enforce overarching policies, such as safety norms, operation standards, and energy restrictions, and integrate multi-faceted management entities, including regulatory agencies and manufacturers, while the current IoT operational workflow remains unchanged. Central to the management plane is a meticulously designed, identity-independent policy framework that employs flexible descriptors rather than fixed identifiers, allowing for proactive deployment of overarching policies with adaptability to system changes. Our evaluation across three datasets indicates that the proposed framework can achieve near-optimal expressiveness and dependable policy enforcement.

cs.NI↗

A Theoretical Analysis of Detecting Large Model-Generated Time Series

Motivated by the increasing risks of data misuse and fabrication, we investigate the problem of identifying synthetic time series generated by Time-Series Large Models (TSLMs) in this work. While there are extensive researches on detecting model generated text, we find that these existing methods are not applicable to time series data due to the fundamental modality difference, as time series usually have lower information density and smoother probability distributions than text data, which limit the discriminative power of token-based detectors. To address this issue, we examine the subtle distributional differences between real and model-generated time series and propose the contraction hypothesis, which states that model-generated time series, unlike real ones, exhibit progressively decreasing uncertainty under recursive forecasting. We formally prove this hypothesis under theoretical assumptions on model behavior and time series structure. Model-generated time series exhibit progressively concentrated distributions under recursive forecasting, leading to uncertainty contraction. We provide empirical validation of the hypothesis across diverse datasets. Building on this insight, we introduce the Uncertainty Contraction Estimator (UCE), a white-box detector that aggregates uncertainty metrics over successive prefixes to identify TSLM-generated time series. Extensive experiments on 32 datasets show that UCE consistently outperforms state-of-the-art baselines, offering a reliable and generalizable solution for detecting model-generated time series.

cs.AI↗

Every Activation Boosted: Scaling General Reasoner to 1 Trillion Open Language Foundation

We introduce Ling 2.0, a series reasoning-oriented language foundation built upon the principle that every activation boosts reasoning capability. Designed to scale from tens of billions to one trillion parameters under a unified Mixture-of-Experts (MoE) paradigm, Ling 2.0 emphasizes high sparsity, cross-scale consistency, and efficiency guided by empirical scaling laws. The series includes three non-thinking (instruct) models - Ling-mini-2.0, Ling-flash-2.0, and Ling-1T - ranging from 16B to 1T total parameters and achieving up to 7-fold active-compute efficiency compared with dense counterparts. Ling 2.0 integrates coordinated innovations across model architecture, pre-training, post-training, and infrastructure: a high-sparsity MoE with MTP for efficient reasoning, reasoning-oriented data and mid-training CoT activation, reinforcement-based fine-tuning (DFT, Evo-CoT), and full-scale FP8 training with fine-grained heterogeneous pipelines. At the trillion scale, Ling-1T establishes a new Pareto frontier of reasoning accuracy versus computational efficiency, demonstrating that sparse activation, when properly aligned with reasoning objectives, enables scalable and efficient intelligence. Collectively, Ling 2.0 provides a coherent, open, and efficient foundation for advancing future reasoning and thinking models, including the Ring series built upon the same base.

cs.CL↗

High-Precision Physics Experiments at Huizhou Large-Scale Scientific Facilities

In response to the capabilities presented by the High-Intensity Heavy Ion Accelerator Facility (HIAF) and the Accelerator-Driven Subcritical System (CiADS), as well as the proposed Chinese Advanced Nuclear Physics Research Facility (CNUF), we are assembling a consortium of experts in relevant discipline--both domestically and internationally--to delineate high-precision physics experiments that leverage the state-of-the-art research environment afforded by CNUF. Our focus encompasses six primary domains of inquiry: hadron physics--including endeavors such as the super eta factory and investigations into light hadron structures; muon physics; neutrino physics; neutron physics; the testing of fundamental symmetries; and the exploration of quantum effects within nuclear physics, along with the utilization of vortex accelerators. We aim to foster a well-rounded portfolio of large, medium, and small-scale projects, thus unlocking new scientific avenues and optimizing the potential of the Huizhou large scientific facility. The aspiration for international leadership in scientific research will be a guiding principle in our strategic planning. This initiative will serve as a foundational reference for the Institute of Modern Physics in its strategic planning and goal-setting, ensuring alignment with its developmental objectives while striving to secure a competitive edge in technological advancement. Our ambition is to engage in substantive research within these realms of high-precision physics, to pursue groundbreaking discoveries, and to stimulate progress in China's nuclear physics landscape, positioning Huizhou as a preeminent global hub for advanced nuclear physics research.

hep-ph↗