arXiv subjects

Tabea M. G. Pakull

Publications and source records attributed to Tabea M. G. Pakull.

3 recordsLinked to original sources

arXiv2026

MAPLE: Medical Aspect-Based Summarization with Phrase-Level Evidence

Trustworthy clinical summarization requires every claim to be traceable to its evidence, yet existing attribution often resolves only to the sentence or document, leaving clinicians to scan surrounding text for the few words that matter. We argue that the unit of attribution should match the unit of verification: the precise phrase the reader's eye must land on. We present MAPLE (Medical Aspect-Based Summarization with Phrase-Level Evidence), a human-annotated benchmark that grounds each summarized claim in both cited sentences and contributory phrases within them. Spanning 152 randomized controlled trial (RCT) abstracts and 16 clinically motivated aspects, MAPLE comprises 1,799 aspect-based summaries with two-level evidence. We further introduce a decoupled evaluation framework that separately scores content, traceability, and locatability, together with a proxy for the amount of source text a clinician must inspect to verify a claim. Benchmarking eleven LLMs shows that sentence-level citation is consistently strong (C-F1 up to 90.9%), while phrase-level grounding remains less stable and the most discriminative axis across models (P-F1 66.1-84.5%). These results suggest that the key challenge is not only producing accurate summaries, but localizing their supporting evidence precisely enough for efficient clinical verification. Data and code are available at https://github.com/chubohao/maple.

cs.CL↗

arXiv2024

WisPerMed at BioLaySumm: Adapting Autoregressive Large Language Models for Lay Summarization of Scientific Articles

This paper details the efforts of the WisPerMed team in the BioLaySumm2024 Shared Task on automatic lay summarization in the biomedical domain, aimed at making scientific publications accessible to non-specialists. Large language models (LLMs), specifically the BioMistral and Llama3 models, were fine-tuned and employed to create lay summaries from complex scientific texts. The summarization performance was enhanced through various approaches, including instruction tuning, few-shot learning, and prompt variations tailored to incorporate specific context information. The experiments demonstrated that fine-tuning generally led to the best performance across most evaluated metrics. Few-shot learning notably improved the models' ability to generate relevant and factually accurate texts, particularly when using a well-crafted prompt. Additionally, a Dynamic Expert Selection (DES) mechanism to optimize the selection of text outputs based on readability and factuality metrics was developed. Out of 54 participants, the WisPerMed team reached the 4th place, measured by readability, factuality, and relevance. Determined by the overall score, our approach improved upon the baseline by approx. 5.5 percentage points and was only approx 1.5 percentage points behind the first place.

cs.CL↗

arXiv2024

WisPerMed at "Discharge Me!": Advancing Text Generation in Healthcare with Large Language Models, Dynamic Expert Selection, and Priming Techniques on MIMIC-IV

This study aims to leverage state of the art language models to automate generating the "Brief Hospital Course" and "Discharge Instructions" sections of Discharge Summaries from the MIMIC-IV dataset, reducing clinicians' administrative workload. We investigate how automation can improve documentation accuracy, alleviate clinician burnout, and enhance operational efficacy in healthcare facilities. This research was conducted within our participation in the Shared Task Discharge Me! at BioNLP @ ACL 2024. Various strategies were employed, including few-shot learning, instruction tuning, and Dynamic Expert Selection (DES), to develop models capable of generating the required text sections. Notably, utilizing an additional clinical domain-specific dataset demonstrated substantial potential to enhance clinical language processing. The DES method, which optimizes the selection of text outputs from multiple predictions, proved to be especially effective. It achieved the highest overall score of 0.332 in the competition, surpassing single-model outputs. This finding suggests that advanced deep learning methods in combination with DES can effectively automate parts of electronic health record documentation. These advancements could enhance patient care by freeing clinician time for patient interactions. The integration of text selection strategies represents a promising avenue for further research.

cs.CL↗