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Tianyu Liu

Publications and source records attributed to Tianyu Liu.

At least 19 recordsLinked to original sources

Foundation and Small Models Coordination for Visuomotor Policy Learning

Visuomotor policy learning enables robots to perform a wide range of tasks, but small policy models often remain sensitive to changes in object and background appearance. In this work, we investigate the coordination of pretrained vision foundation models with small policy models to improve appearance generalization. We propose a framework in which a small policy model operates on task-relevant visual observations constructed through semantic repainting. A segmentation foundation model identifies the robot and target object, which are rendered with fixed role colors on a constant background. An alternative representation replaces the target's role color with normalized monocular depth predicted by a depth foundation model, providing additional geometric cues. The perception models are adapted using in-distribution data where needed and held fixed during policy training. This design combines the perceptual capabilities of foundation models with a small policy model trained on the resulting observations for action prediction. Evaluations with flow matching policies on simulation benchmarks, together with experiments on two real-world robotic tasks, demonstrate substantial improvements in task success under the evaluated appearance shifts.

cs.RO↗

RAGCell: Retrieval-Augmented Generation as Supervision for Versatile Single-cell Analysis

Single-cell foundation models (scFMs) are transforming computational biology by enabling generalizable, task-agnostic representations for versatile single-cell analysis. Despite their progress in facilitating rapid deployment for downstream tasks, off-the-shelf scFMs still have some overlooked concerns: (I) (Pretraining Cost.) Pretrain-based scFMs necessitate pretraining on a vast volume of cells, rendering it draining resources in applications. (II) (Heterogeneous Gap.) Large Language Models (LLM)-based scFMs ignore the tremendous heterogeneous gap between LLM textual and raw cellular spaces, leading to insufficient capability when facing downstream tasks. To this end, we introduce RAGCell, a versatile single-cell analysis framework that achieves a double-win in both cost-effectiveness and high performance. The success of RAGCell lies in two key aspects: Leveraging LLMs to construct cell-level and feature-level knowledge databases, which serve as supervision signals for training the cell model and significantly reduce the training cost ($>$pretrain-based scFMs). Aligning cell representations with text embeddings from the bi-level knowledge databases, enabling knowledge transfer from textual spaces to cellular spaces and effectively mitigating the heterogeneous gap ($>$LLM-based scFMs). Through extensive experiments on six downstream single-cell analysis tasks, we demonstrate that RAGCell achieves outstanding performance compared to state-of-the-art scFMs while operating at less than $\sim$1/10 the cost of pretrain-based scFMs.

q-bio.GN↗

LabAgent: Customize Any Research Hubs for Scientific Discoveries Using AI Agents

Scientific research is a continuous process that emphasizes inheritance. Methods developed by predecessors are often expanded upon by new researchers to explore more novel and in-depth scientific questions. However, the change of lab staff, such as student graduation, leads to a lack of personnel capable of replicating methods. Methods that have been developed with significant effort and resources cannot be continued. To address these limitations, we propose LabAgent, a reproduce and discovery harness tailored for a lab's continuous work. LabAgent employs two mechanisms to guarantee that all skills can be executed and verified and to record the corrective methods and experiences, allowing for direct correction or avoidance of similar errors. We applied LabAgent to drug property prediction, biomedical problem analysis, protein variant effect prediction, and statistical genetics in life science domains. LabAgent ranks first over commercial generalist agents in every domain, and demonstrates accurate reproduction of a published figure. Overall, these results demonstrate that LabAgent can effectively integrate and reasonably expand laboratory knowledge.

cs.AI↗

Occamy-1.0: Open Pareto-frontier 35B Intelligence for Co-work

Co-work agents execute complex workflows that combine information gathering, tool use, coding, and file manipulation across many model invocations. Because cost and latency accumulate over the full episode, their practical value depends not only on peak capability but also on how efficiently that capability is delivered. Yet many steps in everyday work emphasize state tracking, coordination, recovery, and follow-through rather than frontier-scale reasoning. We present Occamy-1.0, a cost-efficient co-work model obtained by further training the post-trained Qwen3.6-35B-A3B checkpoint. We construct execution-grounded data and environments, capture replayable long-horizon trajectories across multiple harnesses, and use staged post-training to develop and consolidate complementary execution capabilities. Across a broad suite of co-work benchmarks, Occamy-1.0 is consistently among the strongest comparably sized models and remains competitive with substantially larger frontier systems on several tasks. Under our stated evaluation and pricing protocol, its aggregate performance across four representative benchmarks places it at the low-cost knee of the observed cost--performance Pareto frontier. Supporting evaluations in tool calling, coding, and instruction following further show that this specialization preserves broad agentic capability. We release the model weights and a subset of the training data to support research on practical co-work agents and agentic post-training.

cs.AI↗

Mixture-of-Experts Deep Reinforcement Learning for Reliability-Constrained Energy-Efficient PDCCH Monitoring in Internet of Thing Device

The continuous monitoring of the physical downlink control channel (PDCCH) is a major source of energy consumption in fifth-generation (5G) Internet of thing device (IoT-D), since the UE has to blindly detect downlink control information even when no valid scheduling grant is present. Although predictive dynamic power management can reduce unnecessary receiver activity by skipping PDCCH monitoring in grant-free slots, aggressive sleeping may lead to missed grants and degrade reception reliability. To address this tradeoff, this paper formulates UE-side PDCCH monitoring as a reliability-constrained long-term energy minimization problem. Specifically, the IoT-D determines, before observing the actual scheduling outcome, whether to monitor the PDCCH or switch the receiver chain into a low-power state. The objective is to minimize the long-term average energy consumption, including receiver operating energy, component switching energy, and prediction-related computational energy, while ensuring that the false negative rate of scheduling-grant detection remains below a prescribed threshold. The resulting problem is non-convex due to the bursty and temporally correlated nature of grant arrivals, and the binary monitoring decisions coupled by a long-term reliability constraint. To solve this problem, we propose a mixture-of-experts input-output hidden Markov model (MoE-IOHMM)-based predictive monitoring scheme, where multiple IO-HMM experts capture heterogeneous grant-arrival patterns and a gating network adaptively combines their predictions. Simulation results show that the proposed scheme effectively reduces IoT-D-side energy consumption compared with always-on PDCCH monitoring and conventional predictive baselines, while maintaining the false negative rate below the prescribed reliability threshold.

eess.SP↗

TailSieve: Partial-Rollout-Guided Tail Routing for LLM Rollouts

Large-scale rollouts have become a core component of modern LLM systems, spanning reinforcement learning (RL) post-training, on-policy distillation (OPD), and sampling-heavy evaluation pipelines. Unlike online serving, which is typically optimized for request-level latency and throughput, a small number of long-tail generations can dominate the end-to-end makespan of an entire rollout step. In practice, rollout requests are often routed uniformly across replicas, which can place extremely long generations inside high-concurrency decoding batches. To address this, we present TailSieve, a partial-rollout-guided framework that jointly controls tail routing and replica allocation for LLM rollouts. In an idealized setting with known completion lengths, we show that makespan-optimal routing in the long-tail regime combines tail isolation with load balancing, and that a simple top-k policy closely approximates this offline optimum. Leveraging the observation that long-tail prompts tend to remain long-tailed across policy updates, TailSieve uses partial rollouts as a training-free signal for identifying candidate tail groups. A hierarchical controller then jointly adapts the number of isolated groups and the replica split between the tail and bulk pools using collected response-work history and a measured concurrency-throughput model. TailSieve achieves up to 1.67x routing-only speedup over uniform group routing. The resulting low-concurrency tail pool further enables route-specialized speculative decoding with MTP or DFlash, achieving up to 2.59x speedup over uniform routing. Selected prompts are regenerated under the current policy, preserving on-policy generation and avoiding additional routing-induced length bias in steady state.

cs.AI↗

SWE-Bench ProMax: Benchmarking Agents on Large-Scale Multilingual Code Refactoring

As AI coding agents take on increasingly complex, long-horizon software engineering tasks, existing benchmarks are rapidly saturating and their evaluation quality has come under serious scrutiny: a recent audit found that nearly 60% of unsolved SWE-bench Verified instances contain flawed tests -- either overly narrow tests that reject correct solutions or overly broad tests that check unstated requirements -- and that frontier models can verbatim reproduce gold patches from training data. Code refactoring, which requires coordinated, behavior-preserving changes across many files, offers a substantially harder and more realistic test of agent capability, yet remains underserved by current benchmarks. We introduce SWE-Bench ProMax, an expert-curated, multilingual code refactoring benchmark of 170 instances drawn from real commits across seven programming languages (Python, Java, TypeScript, Go, C, C++, and Rust). Every instance undergoes rigorous, multi-stage curation that directly addresses the quality problems identified in prior benchmarks: issue descriptions are rewritten from scratch to provide precise, unambiguous specifications, and test suites are manually reviewed to remove overly narrow and overly broad tests. Tasks with insufficient complexity or limited cross-file scope are filtered out, yielding a benchmark of challenging, large-scale refactoring tasks that average 11.4 modified files and 261.6 lines of code per instance, substantially exceeding the scale of existing benchmarks. Experiments with frontier models under two agent scaffolds show that the best model achieves only 41.2% resolve rate, confirming that SWE-Bench ProMax presents a meaningful and unsaturated challenge for current AI coding agents. Our benchmark is available at https://huggingface.co/datasets/swe-bench-promax/SWE-Bench-ProMax.

cs.CL↗

Budget-Aware LLM Discovery via Cost-Calibrated Frontier Utility

Large language models increasingly support scientific and algorithmic discovery through inference-time search over evaluated candidates. Existing adaptive discovery controllers assign credit based only on score progress, even though prompt length, retries, and guidance calls cause search actions to incur different token costs. We prove that cost-blind credit can forfeit all but a vanishing fraction of attainable quality as frontiers multiply and costs diverge. Under a fixed search-side token budget, the controller must decide which frontier is improving and whether its gain justifies the realized cost before the budget is exhausted. We introduce \textbf{CostAda}, a cost-calibrated adaptive controller built around \emph{cost-calibrated frontier utility}. The utility values frontier progress relative to realized action cost and conditions that credit on the remaining budget. CostAda uses this signal to control local exploration intensity, frontier allocation, and budgeted tactic intervention. Cost and remaining budget therefore shape the search rather than serving only as accounting variables or a stopping rule. CostAda reaches the strongest baseline's full-budget quality with at most half the budget on twelve of sixteen benchmark--backbone pairs while achieving the strongest mean final quality on all eight benchmarks under GLM-5 and GPT-5.4.

cs.LG↗

3D-CovDiffusion: 3D-Aware Diffusion Policy for Coverage Path Planning

Diffusion models have shown strong potential for robot skill learning, yet their role in coverage path planning remains underexplored. In industrial surface processing (painting, polishing, spray coating), high coverage requires globally ordered, temporally coherent trajectories rather than stitching unordered local segments. We reformulate coverage path planning as conditional sequence generation and adopt a geometry-conditioned diffusion framework that synthesizes continuous trajectories directly from raw 3D point clouds. Our method produces temporally ordered trajectory chunks and avoids post-hoc heuristic ordering or stitching in prior learning-based methods via simple sequential concatenation, improving sequence-level consistency. A single shared policy generalizes across different geometries without category-specific architectures. Extensive benchmarks show substantial gains over prior learning-based baselines: 98.2\% lower point-wise Chamfer Distance (lower is better), 97.0\% lower jerk (smoother trajectories), and +67.5 percentage points overlapping surface coverage on average.

cs.RO↗

AngelSpec: Towards Real-World High Performance Inference with Speculative Decoding

Speculative decoding accelerates large language model inference without changing the target distribution, but no single drafting structure performs best across real-world workloads. Autoregressive multi-token prediction (MTP) is a lightweight, stable proposal mechanism, whereas block-parallel diffusion amortizes drafting latency over much longer candidate sequences; the better choice depends strongly on the output distribution. We present AngelSpec, a unified training framework for MTP and block-parallel speculative decoding that addresses this heterogeneity at three levels. At the training level, rather than fitting one universal drafter to a uniform data mixture, we co-specialize structure and data: the MTP drafter is trained on diverse conversational data for high-entropy open-ended chat, and the block-diffusion drafter on code and mathematics data for longer predictable continuations. At the architecture level, we propose DFly, a block-diffusion framework combining a hybrid target-conditioning backbone with a predecessor-conditioned autoregressive head, improving target-feature utilization and intra-block dependency modeling while keeping generation parallel. At the inference level, both acceptance length and verification cost vary with domain, request, online load, and hardware, so DFly treats verification as a shared batch-level resource: it reallocates compute toward high-confidence prefixes across requests and combines expected utility with a profiled cost model to adapt verification depth online. Across the Hy3 series, DFly raises the average accepted length on Hy3-A21B by roughly 30% and attains the highest average throughput at every tested concurrency from 4 to 64, a 1.98-2.40x speedup over autoregressive decoding and 10.5-11.8% higher throughput than DFlash. We release AngelSpec to support training and extending these methods.

cs.CL↗

OmniDelta: Skill-Driven Budget Allocation for Token Compression in OmniLLMs

Emerging Omni-modal Large Language Models (OmniLLMs) enable unified understanding of text, audio, and video, but their long audio-video token sequences introduce substantial memory and inference costs. Existing compression methods mainly focus on selecting important tokens under fixed budgets, leaving the preceding budget-allocation problem underexplored. We show that direct query-to-audio/video similarity is unreliable for inter-modal budget allocation, and that uniform intra-modal budgets can miss key evidence while retaining redundant content. To address these limitations, we propose OmniDelta, a training-free, skill-driven framework that couples intent-aware inter-modal allocation with content-aware intra-modal allocation. OmniDelta first constructs audio and video skill pools to shift the fixed retained-token budget according to query demand, then reallocates modality budgets over audio segments and video frames using local complexity and temporal redundancy. The resulting local budgets can be combined with existing pruning strategies, preserving the total retained-token ratio while changing where the budget is spent. Experiments on four audio-video benchmarks with two Qwen2.5-Omni models show that OmniDelta establishes a new accuracy-efficiency Pareto frontier across pruning ratios. At 25% token retention on Qwen2.5-Omni-7B, OmniDelta reduces GPU memory by 22.0% and achieves a 1.64x end-to-end speedup over full-token inference.

cs.AI↗

HybridSim: A Physics-Learning Hybrid Digital Twin for mmWave Human Sensing

High-fidelity simulation of mmWave radar signals for dynamic human motion is valuable for developing radar-based human sensing models; yet collecting accurately labeled measurements for a specific deployment site remains expensive. We present HybridSim, a physics-learning hybrid simulator that synthesizes mmWave radar signals from dynamic human meshes under a fixed indoor room configuration, explicitly decoupling propagation into two components. To parameterize the human subject, we use a tri-plane representation to extract human features and a Graph Convolutional Network to stabilize optimization and mitigate gradient instability. The direct signal path is modeled via an inverse-rendering formulation with a microfacet BRDF to capture primary surface reflections. In parallel, the indirect path is approximated by combining 3D Gaussian Splatting with a virtual-receiver geometry to fit and reproduce site-specific multipath interference patterns, achieving substantially lower computational cost than explicit full ray tracing. Experiments in a fixed-room setting show improved agreement with a physically based reference and consistent gains on downstream radar-based human sensing tasks when using HybridSim for site-specific data augmentation.

cs.CV↗

D-cut: Adaptive Verification Depth Pruning for Batched Speculative Decoding

Speculative decoding accelerates large language model (LLM) inference without compromising output quality. Recent parallel drafting methods further improve single-request performance by decoupling draft length from drafting latency, enabling longer drafts and higher mean accepted tokens (MAT). However, under high request concurrency, long drafts waste substantial computation on rejected tokens, increasing verification cost and potentially making speculative decoding slower than autoregressive decoding. We present D-Cut, an adaptive pruning method that selects draft tokens jointly across the batch and concentrates the verification budget on tokens most likely to be accepted. D-Cut is motivated by two observations. First, acceptance lengths vary considerably across concurrent requests; D-Cut therefore performs cross-request pruning, allocating the verification budget adaptively according to draft confidence. Second, verification cost depends strongly on the deployment environment, including GPU architecture and parallelism strategy; D-Cut incorporates a runtime cost model to adapt its pruning depth to the target environment. Experiments on dense and mixture-of-experts (MoE) models show that, under high concurrency, D-Cut improves the average speedup from \(1.26\times\) to \(1.65\times\), restores acceleration in dense-model configurations where long-draft baselines are slower than autoregressive decoding, and achieves up to \(3.0\times\) speedup over autoregressive decoding on MoE models.

cs.CL↗

BabyVision: Visual Reasoning Beyond Language

While humans develop core visual skills long before acquiring language, contemporary Multimodal LLMs (MLLMs) still rely heavily on linguistic priors to compensate for their fragile visual understanding. We uncovered a crucial fact: state-of-the-art MLLMs consistently fail on basic visual tasks that humans, even 3-year-olds, can solve effortlessly. To systematically investigate this gap, we introduce BabyVision, a benchmark designed to assess core visual abilities independent of linguistic knowledge for MLLMs. BabyVision spans a wide range of tasks, with 388 items divided into 22 subclasses across four key categories. Empirical results and human evaluation reveal that leading MLLMs perform significantly below human baselines. Gemini3-Pro-Preview scores 49.7, lagging behind 6-year-old humans and falling well behind the average adult score of 94.1. These results show despite excelling in knowledge-heavy evaluations, current MLLMs still lack fundamental visual primitives. Progress in BabyVision represents a step toward human-level visual perception and reasoning capabilities. We also explore solving visual reasoning with generation models by proposing BabyVision-Gen and automatic evaluation toolkit. Our code and benchmark data are released at https://github.com/UniPat-AI/BabyVision for reproduction.

cs.CV↗

Predicting Immune Biomarkers with MultiModal Mixture-of-Expert Pathology Foundation Models Empowers Precision Oncology

Predicting immune biomarkers associated with the tumor immune microenvironment (TIME) is critical for advancing precision oncology, yet existing approaches are largely limited to single image modalities and suffer from insufficient resolution and incomplete utilization of complementary clinical and biological information. Here we introduce MixTIME, a multimodal foundation model that leverages a mixture-of-experts (MoE) architecture to integrate pathology foundation models trained across distinct modalities: image only (UNIv2), image text (CONCHv1.5), and image transcriptomic (STPath) representations for pixel-level and slide-level prediction of multiplex immunofluorescence (mIF) protein expression from hematoxylin and eosin (HE) whole-slide images. MixTIME employs a learnable router to dynamically weight expert contributions and is trained with a distribution- and tendency-aware loss function. Benchmarked on two datasets of different scales, MixTIME achieves state-of-the-art performance across 17 protein markers as measured by correlation metrics. The predicted mIF profiles substantially enhance downstream tasks, including spatial domain identification, survival prediction, and AI-assisted pathology report generation validated by expert pathologists from multiple institutes across the world. Furthermore, MixTIME enables longitudinal tracking of protein expression dynamics across clinical time points and reveals protein gene interaction patterns linked to drug resistance and immune suppression in tumor microenvironments. Collectively, MixTIME provides a scalable framework for multimodal biomarker discovery and clinical translation in computational pathology.

cs.CV↗

Benchmarking AI Agents for Addressing Scientific Challenges Across Scales

AI agents are increasingly being developed to accelerate scientific discovery, yet their practical capabilities in real research settings remain poorly understood. Existing benchmarks for AI agents rarely capture the complexity, heterogeneity, and extended reasoning required by scientific work, whereas benchmarks for scientific tasks often reduce research to static, direct problems and provide limited support for interactive evaluation. Here, we introduce SciAgentArena, a systematic benchmark for evaluating AI agents in real-world scientific research scenarios drawn from emerging needs across multiple domains. SciAgentArena comprises approximately 200 tasks with stepwise verification and an interactive, agent-agnostic environment for assessing diverse AI agents. Using this benchmark, we find that current agents can contribute effectively to well-specified data-analysis workflows, particularly when the task structure and evaluation criteria are clear. However, their performance remains uneven across scientific contexts: agents struggle to generate genuinely novel insights, sustain self-directed exploration, and formulate robust solutions for open-ended research questions. We further characterize common failure modes across agents and identify opportunities for improving their reliability, autonomy, and scientific reasoning. Together, SciAgentArena provides a practical framework for measuring progress in AI agents for science and for guiding the design of future agents capable of addressing complex scientific challenges. Full codes, tasks, and datasets can be accessed via this link: https://sciagentarena.github.io/.

cs.AI↗

Post-Training Language Models for Crosslingual Consistency

Language models often respond inconsistently to translation-equivalent prompts across languages, undermining the reliability of multilingual systems. To quantify this, we give an information-theoretic definition of crosslingual consistency as a divergence bound between a model's response distribution and its round-trip pushforward across languages. We then introduce penalized consistency optimization (PCO), a post-training procedure that couples this divergence with a Kullback-Leibler penalty to a fixed reference language model. Because direct optimization of PCO requires expensive on-policy roll-outs, we propose a tractable surrogate, direct consistency optimization (DCO), which can be optimized off-policy. Across diverse language models and 26 languages, DCO significantly improves crosslingual consistency, outperforms existing methods, and enables targeted alignment of low-resource languages.

cs.CL↗

DA-UCT: Self-Supervised Domain-Adaptive Ultrasound Computed Tomography for Rapid Musculoskeletal Sound Speed Reconstruction

Ultrasound computed tomography (UCT) via full waveform inversion (FWI) enables high-resolution quantitative imaging for tissue characterization and disease diagnosis. However, UCT suffers from large computational burden and severe convergence issues due to highly nonlinear optimization. Deep learning can accelerate UCT reconstruction, but supervised training requires large-scale labeled datasets difficult to obtain in vivo. To address these limitations, we propose SDA-UCT, a two-stage self-supervised domain-adaptive framework for rapid and accurate UCT imaging of musculoskeletal tissues. SDA-UCT employs an attention-enhanced network (AttUCT) pre-trained on simulation datasets and transfers to in-vivo data via physics-informed self-supervised learning, effectively bridging the simulation-to-real domain gap. A Low-Rank Adaptation (LoRA) mechanism is integrated to enable efficient adaptation across diverse clinical scenarios. Results showed that AttUCT achieved high-quality SOS reconstruction for simulated human forearm with a PSNR of 29.23 dB and SSIM of 0.928, outperforming conventional FWI and existing deep learning methods. Validated on in-vivo data, SDA-UCT successfully reconstructed SOS images revealing complex anatomical structures (skin, fat, muscle, tendon, bone and bone marrow) for human forearm, in high concordance with MRI references. The LoRA mechanism adjusting only 3% of parameters achieved comparable performance to full fine-tuning. The rapid reconstruction (5 ms per frame) enables real-time 3D visualization, achieving five-orders-of-magnitude improvement over traditional FWI. This work represents the first self-supervised domain-adaptive deep learning for rapid, high-resolution in-vivo UCT imaging, showing potential for musculoskeletal disease diagnosis.

cs.CV↗