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Tirtho Roy

Publications and source records attributed to Tirtho Roy.

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Towards Reversible Forgetting: Managing Obsolete Knowledge in Continual Enterprise AI Agents

Continual learning has traditionally treated forgetting as a failure, emphasizing preservation of previously acquired knowledge as environments evolve. We argue that this objective is incomplete for enterprise AI agents operating in non-stationary environments, where customers, policies, tools, workflows, regulations, and market conditions change over time. Indiscriminate retention can allow obsolete knowledge to influence decisions, creating negative transfer and operational risk. We therefore propose reversible forgetting: a conceptual framework with three operational memory states: active, dormant, and retired, and a reactivation transition that can restore dormant knowledge when its relevance returns. We instantiate the framework as a Hysteretic Reversible Memory Controller that accumulates relevance evidence, uses asymmetric thresholds to prevent state oscillation, tests reactivation in shadow mode, and gates retirement through policy. The framework reduces the influence of obsolete information without conflating temporary suppression with permanent erasure. Finance illustrates the idea: knowledge useful under one market regime may become harmful under another yet regain relevance when similar conditions recur.

cs.LG

bioMoR: Biology-Guided Mixture-of-Recursions for Effective Genomic Learning

Transformer models for high-dimensional omics analysis process thousands of genes or pathways, although only a subset requires deep computation. Mixture-of-Recursions (MoR) improves efficiency through adaptive token-choice or expert-choice routing. We propose bioMoR, which, to the best of our knowledge, is the first framework to apply MoR to gene-level and pathway-level learning. Our contributions include identifying three locations for integrating structured biological knowledge within an MoR backbone: graph-based information sharing refines token embeddings, a structural bias guides self-attention toward biologically related tokens, and a graph-aware router uses neighborhood information to determine each token's recursion depth. These techniques are centered on our insight that additional knowledge of token interaction can effectively help models construct embeddings and select which tokens should be learned more deeply. Across eight benchmarks spanning diverse omics data types and evaluated under a unified five-fold cross-validation protocol, bioMoR improves average macro-F1 by 8.2 percentage points and balanced accuracy by 7.1 percentage points over the strongest biology-agnostic MoR baseline while using 75 percent fewer parameters and up to 58 percent fewer FLOPs than a non-recursive Transformer. The selected marker genes or pathways provide biological interpretability, while their token-specific recursion depths reveal how computation is allocated.

cs.AI

Toward Uncertainty Quantification in Modern Art

Asked to animate the same modern artwork under different random seeds, a text to video model returns visibly different films, one reading per seed. Because modern art is ambiguous by intent, this disagreement is signal, not noise. Yet prevailing uncertainty quantification (UQ) collapses a set of generations to a dispersion scalar that says how much the seeds differ but not how: it cannot tell a compact interpretation from a dominant reading plus an outlier, two competing modes, or diffuse instability, nor whether the set still contains a rendering faithful to the original. We present the first study of the structure of generative uncertainty for modern art animation, and a reusable protocol for identifying source blind multiseed uncertainty: a suite of seven source blind and six reference aware estimators; a distributional profile (robust spread, outlier influence, explicit topology, multimodality, anisotropy, leave one seed influence, reference coverage); a distribution model ablation (vMF, Kent, ACG, Student t, kernel, mixture); eight identification questions; and an artwork level statistical protocol. We build the first corpus: 250 modern artwork captions rendered by Wan2.1 14B under four seeds (1000 videos) across 4 encoders, artworks withheld from generation. As a diagnostic the protocol succeeds: it classifies seed set topology at balanced accuracy 0.98 (chance 0.25), isolates the outlier configuration at AUROC 1.00 where a scalar reaches only 0.35, and splits high uncertainty artworks into reference covering (n=97) and reference missing (n=56) diversity, reliably from three seeds and across encoders.

cs.GR

TRAPS: Treatment-Assignment Prediction via Pathway-informed Stratification

Cancer treatment involves decisions across multiple clinical outcomes, yet pathway-informed deep learning models are typically evaluated in isolation, making their relative benefits unclear. We present a harmonized benchmark of three biologically informed architectures, BINN, GraphPath, and PATH, for predicting treatment exposure and short-term survival across five TCGA cancer cohorts comprising 2,622 patients represented by Reactome pathway activity scores. Treatment labels indicate recorded exposure in TCGA rather than therapeutic response. All models jointly predict targeted molecular therapy (TMT), radiation therapy (RT), and six-month overall survival (OS) from a shared pathway representation and are evaluated on identical stratified folds using five repeated splits and paired-bootstrap testing. Under this controlled evaluation, most differences between architectures fall within 95 percent confidence intervals, indicating that rankings suggested by isolated evaluations are largely not statistically resolved. The main exception is survival prediction: the sparse-hierarchy BINN significantly outperforms both graph models on breast-cancer OS, with an AUROC improvement of up to 0.14 and p less than or equal to 0.01, and leads on lung and prostate OS. For treatment exposure, TMT is best discriminated in prostate cancer, with AUROC approximately 0.80 for all models, but no architecture significantly outperforms another on any TMT cohort. RT prediction remains weak across models, suggesting that its determinants may be more clinical than transcriptomic. Overall, architecture choice has limited impact under a unified evaluation, while short-term survival provides the clearest differentiation among pathway-informed models.

cs.LG

SAGE: Scalable Agentic Grounded Evaluation for Crop Disease Diagnosis

Plant disease diagnosis is critical for food security, yet training disease-recognition models that generalize across crops, pathogens, and field conditions remains challenging because labeled disease images are far less abundant and standardized than data for other biotic stresses such as insects or weeds. Frontier vision-language models offer new opportunities through improved visual reasoning, but they still struggle with fine-grained disease identification due to the lack of structured, crop-specific symptom knowledge. To address this gap, we curate the largest plant disease image--symptom dataset to date, covering 335 crops, 1{,}251 disease classes, and approximately 839K images, designed to support training-free, agentic disease prediction. A scalable automated pipeline generates source-grounded symptom descriptions in which each claim is linked to a verbatim web quote; domain experts validate sampled crops and reconcile disease-name variants across sources. As a baseline, we introduce an autonomous visual reasoning agent that identifies anatomical context, narrows candidate diseases using symptom knowledge, sequentially compares reference images, and produces a fully explainable reasoning trace. Incorporating symptom knowledge improves accuracy by 16.2 percentage points on average at the full reference budget, with consistent gains across all four evaluation crops. Because the framework only requires crop-specific reference images and symptom knowledge, it can be extended to new crops without retraining, while the agentic baseline can directly benefit from future improvements in foundation model capabilities. Dataset and code are available at:https://sage-dataset.github.io/.

cs.MA

Improving the Safety and Trustworthiness of Medical AI via Multi-Agent Evaluation Loops

Large Language Models (LLMs) are increasingly applied in healthcare, yet ensuring their ethical integrity and safety compliance remains a major barrier to clinical deployment. This work introduces a multi-agent refinement framework designed to enhance the safety and reliability of medical LLMs through structured, iterative alignment. Our system combines two generative models - DeepSeek R1 and Med-PaLM - with two evaluation agents, LLaMA 3.1 and Phi-4, which assess responses using the American Medical Association's (AMA) Principles of Medical Ethics and a five-tier Safety Risk Assessment (SRA-5) protocol. We evaluate performance across 900 clinically diverse queries spanning nine ethical domains, measuring convergence efficiency, ethical violation reduction, and domain-specific risk behavior. Results demonstrate that DeepSeek R1 achieves faster convergence (mean 2.34 vs. 2.67 iterations), while Med-PaLM shows superior handling of privacy-sensitive scenarios. The iterative multi-agent loop achieved an 89% reduction in ethical violations and a 92% risk downgrade rate, underscoring the effectiveness of our approach. This study presents a scalable, regulator-aligned, and cost-efficient paradigm for governing medical AI safety.

cs.AI

Leveraging Vision Language Models for Specialized Agricultural Tasks

As Vision Language Models (VLMs) become increasingly accessible to farmers and agricultural experts, there is a growing need to evaluate their potential in specialized tasks. We present AgEval, a comprehensive benchmark for assessing VLMs' capabilities in plant stress phenotyping, offering a solution to the challenge of limited annotated data in agriculture. Our study explores how general-purpose VLMs can be leveraged for domain-specific tasks with only a few annotated examples, providing insights into their behavior and adaptability. AgEval encompasses 12 diverse plant stress phenotyping tasks, evaluating zero-shot and few-shot in-context learning performance of state-of-the-art models including Claude, GPT, Gemini, and LLaVA. Our results demonstrate VLMs' rapid adaptability to specialized tasks, with the best-performing model showing an increase in F1 scores from 46.24% to 73.37% in 8-shot identification. To quantify performance disparities across classes, we introduce metrics such as the coefficient of variation (CV), revealing that VLMs' training impacts classes differently, with CV ranging from 26.02% to 58.03%. We also find that strategic example selection enhances model reliability, with exact category examples improving F1 scores by 15.38% on average. AgEval establishes a framework for assessing VLMs in agricultural applications, offering valuable benchmarks for future evaluations. Our findings suggest that VLMs, with minimal few-shot examples, show promise as a viable alternative to traditional specialized models in plant stress phenotyping, while also highlighting areas for further refinement. Results and benchmark details are available at: https://github.com/arbab-ml/AgEval

cs.LG