Search arXiv⌕ Search

arXiv subjects

Xinyu Liu

Publications and source records attributed to Xinyu Liu.

At least 235 records · Page 13Linked to original sources

Amazon SageMaker Clarify: Machine Learning Bias Detection and Explainability in the Cloud

Understanding the predictions made by machine learning (ML) models and their potential biases remains a challenging and labor-intensive task that depends on the application, the dataset, and the specific model. We present Amazon SageMaker Clarify, an explainability feature for Amazon SageMaker that launched in December 2020, providing insights into data and ML models by identifying biases and explaining predictions. It is deeply integrated into Amazon SageMaker, a fully managed service that enables data scientists and developers to build, train, and deploy ML models at any scale. Clarify supports bias detection and feature importance computation across the ML lifecycle, during data preparation, model evaluation, and post-deployment monitoring. We outline the desiderata derived from customer input, the modular architecture, and the methodology for bias and explanation computations. Further, we describe the technical challenges encountered and the tradeoffs we had to make. For illustration, we discuss two customer use cases. We present our deployment results including qualitative customer feedback and a quantitative evaluation. Finally, we summarize lessons learned, and discuss best practices for the successful adoption of fairness and explanation tools in practice.

cs.LG↗

Testing DBMS Performance with Mutations

Because database systems are the critical component of modern data-intensive applications, it is important to ensure that they operate correctly. To this end, developers extensively test these systems to eliminate bugs that negatively affect functionality. In addition to functional bugs, however, there is another important class of bugs: performance bugs. These bugs negatively affect the response time of a database system and can therefore affect the overall performance of the system. Despite their impact on end-user experience, performance bugs have received considerably less attention than functional bugs. In this paper, we present AMOEBA, a system for automatically detecting performance bugs in database systems. The core idea behind AMOEBA is to construct query pairs that are semantically equivalent to each other and then compare their response time on the same database system. If the queries exhibit a significant difference in their runtime performance, then the root cause is likely a performance bug in the system. We propose a novel set of structure and predicate mutation rules for constructing query pairs that are likely to uncover performance bugs. We introduce feedback mechanisms for improving the efficacy and computational efficiency of the tool. We evaluate AMOEBA on two widely-used DBMSs, namely PostgreSQL and CockroachDB. AMOEBA has discovered 20 previously-unknown performance bugs, among which developers have already confirmed 14 and fixed 4.

cs.DB↗

Optical phased array neural probes for beam-steering in brain tissue

Implantable silicon neural probes with integrated nanophotonic waveguides can deliver patterned dynamic illumination into brain tissue at depth. Here, we introduce neural probes with integrated optical phased arrays and demonstrate optical beam steering in vitro. Beam formation in brain tissue was simulated and characterized. The probes were used for optogenetic stimulation and calcium imaging.

physics.optics↗

A Novel Strategy for GaN-on-Diamond Device with a High Thermal Boundary Conductance

To achieve high device performance and high reliability for the gallium nitride (GaN)-based high electron mobility transistors (HEMTs), efficient heat dissipation is important but remains challenging. Enormous efforts have been made to transfer a GaN device layer onto a diamond substrate with a high thermal conductivity by bonding. In this work, two GaN-diamond bonded composites are prepared via modified surface activated bonding (SAB) at room temperature with silicon interlayers of different thicknesses (15 nm and 22 nm). Before and after post-annealing process at 800 oC, thermal boundary conductance (TBC) across the bonded interface including the interlayer and the stress of GaN layer are investigated by time-domain thermoreflectance and Raman spectroscopy, respectively. After bonding, the 15 nm Si interlayer achieved a higher TBC. The post-annealing significantly increased the TBC of both interfaces, while the TBC of 22 nm silicon interlayer increased greater and became higher than that of 15 nm. Detailed investigation of the microstructure and composition of the interfaces were carried out to understand the difference in interfacial thermal conduction. The obtained stress was no more than 230 MPa for both before and after the annealing, and this high thermal stability of the bonded composites indicates that the room temperature bonding can realize a GaN-on-diamond template suitable for further epitaxial growth or device process. This work brings a novel strategy of SAB followed by high-temperature annealing to fabricate a GaN-on-diamond device with a high TBC.

physics.app-ph↗

3D RegNet: Deep Learning Model for COVID-19 Diagnosis on Chest CT Image

In this paper, a 3D-RegNet-based neural network is proposed for diagnosing the physical condition of patients with coronavirus (Covid-19) infection. In the application of clinical medicine, lung CT images are utilized by practitioners to determine whether a patient is infected with coronavirus. However, there are some laybacks can be considered regarding to this diagnostic method, such as time consuming and low accuracy. As a relatively large organ of human body, important spatial features would be lost if the lungs were diagnosed utilizing two dimensional slice image. Therefore, in this paper, a deep learning model with 3D image was designed. The 3D image as input data was comprised of two-dimensional pulmonary image sequence and from which relevant coronavirus infection 3D features were extracted and classified. The results show that the test set of the 3D model, the result: f1 score of 0.8379 and AUC value of 0.8807 have been achieved.

eess.IV↗

Epitaxial growth and magnetic characterization of EuSe thin films with various crystalline orientations

We report different growth modes and corresponding magnetic properties of thin EuSe films grown by molecular beam epitaxy on BaF2, Pb1-xEuxSe, GaAs, and Bi2Se3 substrates. We show that EuSe growth predominantly in (001) orientation on GaAs(111) and Bi2Se3, but along (111) crystallographic direction on BaF2 (111) and Pb1-xEuxSe (111). High-resolution transmission electron microscopy measurements reveal an abrupt and highly crystalline interface for both (001) and (111) EuSe films. In agreement with previous studies, ordered magnetic phases include antiferromagnetic, ferrimagnetic, and ferromagnetic phases. In contrast to previous studies, we found strong hysteresis for the antiferromagnetic-ferrimagnetic transition. An ability to grow epitaxial films of EuSe on Bi2Se3 and of Bi2Se3 on EuSe enables further investigation of interfacial exchange interactions between various phases of an insulating metamagnetic material and a topological insulator.

cond-mat.mtrl-sci↗

Ethereum Name Service: the Good, the Bad, and the Ugly

DNS has always been criticized for its inherent design flaws, making the system vulnerable to kinds of attacks. Besides, DNS domain names are not fully controlled by the users, which can be easily taken down by the authorities and registrars. Since blockchain has its unique properties like immutability and decentralization, it seems to be promising to build a decentralized name service on blockchain. Ethereum Name Service (ENS), as a novel name service built atop Etheruem, has received great attention from the community. Yet, no existing work has systematically studied this emerging system, especially the security issues and misbehaviors in ENS. To fill the void, we present the first large-scale study of ENS by collecting and analyzing millions of event logs related to ENS. We characterize the ENS system from a number of perspectives. Our findings suggest that ENS is showing gradually popularity during its four years' evolution, mainly due to its distributed and open nature that ENS domain names can be set to any kinds of records, even censored and malicious contents. We have identified several security issues and misbehaviors including traditional DNS security issues and new issues introduced by ENS smart contracts. Attackers are abusing the system with thousands of squatting ENS names, a number of scam blockchain addresses and malicious websites, etc. Our exploration suggests that our community should invest more effort into the detection and mitigation of issues in Blockchain-based Name Services towards building an open and trustworthy name service.

cs.CR↗

Resolution enhancement and realistic speckle recovery with generative adversarial modeling of micro-optical coherence tomography

A resolution enhancement technique for optical coherence tomography (OCT), based on Generative Adversarial Networks (GANs), was developed and investigated. GANs have been previously used for resolution enhancement of photography and optical microscopy images. We have adapted and improved this technique for OCT image generation. Conditional GANs (cGANs) were trained on a novel set of ultrahigh resolution spectral domain OCT volumes, termed micro-OCT, as the high-resolution ground truth (~1$μ$m isotropic resolution). The ground truth was paired with a low-resolution image obtained by synthetically degrading resolution 4x in one of (1-D) or both axial and lateral axes (2-D). Cross-sectional image (B-scan) volumes obtained from in vivo imaging of human labial (lip) tissue and mouse skin were used in separate feasibility experiments. Accuracy of resolution enhancement compared to ground truth was quantified with human perceptual accuracy tests performed by an OCT expert. The GAN loss in the optimization objective, noise injection in both the generator and discriminator models, and multi-scale discrimination were found to be important for achieving realistic speckle appearance in the generated OCT images. The utility of high resolution speckle recovery was illustrated by an example of micro-OCT imaging of blood vessels in lip tissue. Qualitative examples applying the models to image data from outside of the training data distribution, namely human retina and mouse bladder, were also demonstrated, suggesting potential for cross-domain transferability. This preliminary study suggests that deep learning generative models trained on OCT images from high-performance prototype systems may have potential in enhancing lower resolution data from mainstream/commercial systems, thereby bringing cutting-edge technology to the masses at low cost.

eess.IV↗

TanhExp: A Smooth Activation Function with High Convergence Speed for Lightweight Neural Networks

Lightweight or mobile neural networks used for real-time computer vision tasks contain fewer parameters than normal networks, which lead to a constrained performance. In this work, we proposed a novel activation function named Tanh Exponential Activation Function (TanhExp) which can improve the performance for these networks on image classification task significantly. The definition of TanhExp is f(x) = xtanh(e^x). We demonstrate the simplicity, efficiency, and robustness of TanhExp on various datasets and network models and TanhExp outperforms its counterparts in both convergence speed and accuracy. Its behaviour also remains stable even with noise added and dataset altered. We show that without increasing the size of the network, the capacity of lightweight neural networks can be enhanced by TanhExp with only a few training epochs and no extra parameters added.

cs.LG↗

Deep least-squares methods: an unsupervised learning-based numerical method for solving elliptic PDEs

This paper studies an unsupervised deep learning-based numerical approach for solving partial differential equations (PDEs). The approach makes use of the deep neural network to approximate solutions of PDEs through the compositional construction and employs least-squares functionals as loss functions to determine parameters of the deep neural network. There are various least-squares functionals for a partial differential equation. This paper focuses on the so-called first-order system least-squares (FOSLS) functional studied in [3], which is based on a first-order system of scalar second-order elliptic PDEs. Numerical results for second-order elliptic PDEs in one dimension are presented.

cs.LG↗

Anomalous critical point behavior in dilute magnetic semiconductor (Ca,Na)(Zn,Mn)2Sb2

In this paper we report successful synthesis and magnetic properties of (Ca,Na)(Zn,Mn)2Sb2 as a new ferromagnetic dilute magnetic semiconductor (DMS). In this DMS material the concentration of magnetic moments can be controlled independently from the concentration of electric charge carriers that are required for mediating magnetic interactions between these moments. This feature allows us to separately investigate the effect of carriers and of spins on the ferromagnetic properties of this new DMS alloy, and particularly of the critical ferromagnetic behavior. We use modified Arrott plot technique to establish critical exponents b, g, and d of this alloy. We find that at low Mn concentrations (< 10 at.%), it is governed by short-range 3D-Ising behavior, with experimental values of b, g, and d very close to theoretical 3D-Ising values of 0.325, 1.24, and 4.815. However, as the Mn concentration increases, this DMS material exhibits a mixed-phase behavior, with g retaining its 3D-Ising characteristics, but b crossing over to longer-range mean-field behavior.

cond-mat.mtrl-sci↗

Showing Your Work Doesn't Always Work

In natural language processing, a recently popular line of work explores how to best report the experimental results of neural networks. One exemplar publication, titled "Show Your Work: Improved Reporting of Experimental Results," advocates for reporting the expected validation effectiveness of the best-tuned model, with respect to the computational budget. In the present work, we critically examine this paper. As far as statistical generalizability is concerned, we find unspoken pitfalls and caveats with this approach. We analytically show that their estimator is biased and uses error-prone assumptions. We find that the estimator favors negative errors and yields poor bootstrapped confidence intervals. We derive an unbiased alternative and bolster our claims with empirical evidence from statistical simulation. Our codebase is at http://github.com/castorini/meanmax.

cs.CL↗

A Simple Phase Retrieval Algorithm from a Single Shot Interferogram

Traditional phase-shifting interferometry technique cannot be used to measure time-varying phase distributions. But single shot techniques could resolve the problem. Many efforts have been made on the phase retrieval methods from a single shot interferogram. In the paper, a simple and effective method is presented without complex computation. The interference fringe is transferred to a phase distribution with a look-up-table. And then it is divided into different regions according to the parity of every pixel. The pixels in the same region have the same parity, which determines the wrapped phase. Additionally, the light spot displacement of a local wavefront is obtained to solve the global sign ambiguity. The theoretical simulation results indicate that the PV of wavefront error is 0.00054(lambda) and the rms is 0.000125(lambda), which is much better than the results from the Fast Fourier Transformation method. We also use it in the experimentally measured interferogram. Our algorithm has the advantages of simplicity, high precision and effective for both open and closed interferometer fringes, which will be valuable for real time monitoring the optical elements shape during their processing.

physics.ins-det↗

Review of data analysis in vision inspection of power lines with an in-depth discussion of deep learning technology

The widespread popularity of unmanned aerial vehicles enables an immense amount of power lines inspection data to be collected. How to employ massive inspection data especially the visible images to maintain the reliability, safety, and sustainability of power transmission is a pressing issue. To date, substantial works have been conducted on the analysis of power lines inspection data. With the aim of providing a comprehensive overview for researchers who are interested in developing a deep-learning-based analysis system for power lines inspection data, this paper conducts a thorough review of the current literature and identifies the challenges for future research. Following the typical procedure of inspection data analysis, we categorize current works in this area into component detection and fault diagnosis. For each aspect, the techniques and methodologies adopted in the literature are summarized. Some valuable information is also included such as data description and method performance. Further, an in-depth discussion of existing deep-learning-related analysis methods in power lines inspection is proposed. Finally, we conclude the paper with several research trends for the future of this area, such as data quality problems, small object detection, embedded application, and evaluation baseline.

cs.CV↗

Optimization Models for Estimating Transit Network Origin-Destination Flows with AVL/APC Data

With the increasing adoption of Automatic Vehicle Location (AVL) and Automatic Passenger Count (APC) technologies by transit agencies, a massive amount of time-stamped and location-based passenger boarding and alighting count data can be collected on a continuous basis. The availability of such large-scale transit data offers new opportunities to produce estimates for Origin-Destination (O-D) flows, helping inform transportation planning and transit management. However, the state-of-the-art methodologies for AVL/APC data analysis mostly tackle the O-D flow estimation problem within routes and barely infer the transfer activities across the entire transit network. This paper proposes three optimization models to identify transfers and approximate network-level O-D flows by minimizing the deviations between estimated and observed proportions or counts of transferring passengers: A Quadratic Integer Program (QIP), a feasible rounding procedure for the Quadratic Convex Programming (QCP) relaxation of the QIP, and an Integer Program (IP). The inputs of the models are readily available by applying the various route-level flow estimation algorithms to the automatically collected AVL/APC data and the output of the models is a network O-D estimation at varying geographical resolutions. The optimization models were evaluated on a case study for Ann Arbor-Ypsilanti area in Michigan. The IP model outperforms the QCP approach in terms of accuracy and remains tractable from an efficiency standpoint, contrary to the QIP. Its estimated O-D matrix achieves an R-Squared metric of 95.57% at the Traffic Analysis Zone level and 92.39% at the stop level, compared to the ground-truth estimates inferred from the state-of-practice trip-chaining methods.

math.OC↗

Voltage-induced high-speed DW motion in a synthetic antiferromagnet

Voltage-induced motion of a magnetic domain wall (DW) has potential in developing novel devices with ultralow dissipation. However, the speed for the voltage-induced DW motion (VIDWM) in a single ferromagnetic layer is usually very low. In this work, we proposed VIDWM with high speed in a synthetic antiferromaget (SAF). The velocity for the coupled DWs in the SAF is significantly higher than its counterpart in a single ferromagnetic layer. Strong interlayer antiferromagnetic exchange coupling plays a critical role for the high DW velocity since it inhibits the tilting of DW plane with strong Dzyaloshinskii-Moriya interaction. On the other hand, the Walker breakdown of DW motion is also inhibited due to the stabilization of moment orientation under a strong interlayer antiferromagnetic coupling. In theory, the voltage-induced gradient of magnetic anisotropy is proved to be equal to an effective magnetic field that drives DW.

physics.app-ph↗

Contrast of nuclei in stratified squamous epithelium in optical coherence tomography images at 800 nm

Imaging nuclei of keratinocytes in the stratified squamous epithelium has been a subject of intense research since nucleus associated cellular atypia is the key criteria for the screening and diagnosis of epithelial cancers and their precursors. However, keratinocyte nuclei have been reported to be either low scattering or high scattering, so that these inconsistent reports might have led to misinterpretations of optical images, and more importantly, hindered the establishment of optical diagnostic criteria. We disclose that they are generally low scattering in the core using Micro-optical coherence tomography (micro-OCT) of 1.28 um axial resolution in vivo; those previously reported high scattering or bright signals from nuclei are likely from the nucleocytoplasmic boundary, and the low-scattering nuclear cores were missed possibly due to insufficient axial resolutions (about 4 um). It is further demonstrated that the high scattering signals may be associated with flattening of nuclei and cytoplasmic glycogen accumulation, which are valuable cytologic hallmarks of cell maturation.

q-bio.TO↗

Polarization constraints in reciprocal unitary backscattering

We observed that the polarization state of light after round-trip propagation through a birefringent medium frequently aligns with the employed input polarization state "mirrored" by the horizontal plane of the Poincare sphere. In this letter we explore the predisposition for this mirror state and demonstrate how it constrains the evolution of polarization states as a function of the round-trip depth into weakly scattering birefringent samples, as measured with polarization-sensitive optical coherence tomography (PS-OCT). The constraint enables measurements of depth-resolved sample birefringence with PS-OCT using only a single input polarization state, which offers a critical simplification compared to the use of multiple input states.

physics.optics↗