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Yan Zhuang

Publications and source records attributed to Yan Zhuang.

At least 19 recordsLinked to original sources

A visual large language foundational model for medical image recognition using clinician-oriented social media

Large language models (LLMs) have demonstrated strong capabilities across diverse domains, showing considerable potential in medicine. However, their application in medical settings remains limited by the scarcity of visual question answering (VQA) datasets that capture clinical reasoning and explicit image-text alignment. Here, we leverage de-identified medical images and expert commentaries shared on clinician-oriented social media. By combining an advanced LLM with clinician-in-the-loop verification, we established a rigorous pipeline to construct ThoughtMed-1M, a long-form medical VQA dataset containing over one million VQA pairs and designed to capture structured clinical logic and medical image-text alignment. To demonstrate its utility, we developed a FOundational LLM Trained on ThoughtMed-1M (FOLTMed). FOLTMed achieved state-of-the-art performance across 42 medical VQA benchmark datasets, with a macro accuracy of 85.4%, and generated more clinically coherent responses on the ThoughtMed-1M test set. It outperformed state-of-the-art models by 3--5% across factuality and similarity metrics, highlighting a scalable paradigm for advancing research on clinically grounded multimodal LLMs.

cs.AI

Bijections between pattern-avoiding derangements and desarrangements

Derangements are permutations without fixed points, and are in bijection with desarrangements: permutations whose first non-descent is even, or equivalently, permutations without ``pixed points''. Bsila, Cox, Hugo, Styron, and Zhuang recently proved a theorem characterizing all $\Pi\subseteq\mathfrak{S}_{3}$, such that $1\leq\left|\Pi\right|\leq3$, for which the number of derangements avoiding all patterns in $\Pi$ is equal to the number of desarrangements avoiding all patterns in $\Pi$. They left finding a bijective proof of this theorem as an open problem, and posed a related conjecture concerning the distributions of fixed points and pixed points over pattern avoidance classes. In this paper, we give bijective proofs of this theorem and conjecture.

math.CO

Modality-Aware Contrastive and Uncertainty-Regularized Emotion Recognition

Multimodal Emotion Recognition (MER) has attracted growing attention with the rapid advancement of human-computer interaction. However, different modalities exhibit substantial discrepancies in semantics, quality, and availability, leading to highly heterogeneous modality combinations and posing significant challenges to achieving consistent and reliable emotion understanding. To address this challenge, we propose the Modality-Aware Contrastive and Uncertainty-Regularized (MCUR) framework, which approaches MER from the perspective of representation consistency, aiming to enable robust emotion prediction across heterogeneous modality combinations. MCUR incorporates two core components: (1) Modality Combination-Based and Category-Based Contrastive Learning mechanism (MCB-CL), which encourages samples with the same emotion category and the same available modalities to be close in the representation space; and (2) Sample-wise Uncertainty-Guided Regularization (SUGR), which adaptively assigns sample-wise uncertain weights to samples to optimize training. Extensive experiments demonstrate that MCUR consistently outperforms existing methods, achieving average F1 gains of 2.2% on MOSI, 2.67% on MOSEI, and 4.37% on IEMOCAP.

cs.MM

Beyond Explicit Refusals: Soft-Failure Attacks on Retrieval-Augmented Generation

Existing jamming attacks on Retrieval-Augmented Generation (RAG) systems typically induce explicit refusals or denial-of-service behaviors, which are conspicuous and easy to detect. In this work, we formalize a subtler availability threat, termed soft failure, which degrades system utility by inducing fluent and coherent yet non-informative responses rather than overt failures. We propose Deceptive Evolutionary Jamming Attack (DEJA), an automated black-box attack framework that generates adversarial documents to trigger such soft failures by exploiting safety-aligned behaviors of large language models. DEJA employs an evolutionary optimization process guided by a fine-grained Answer Utility Score (AUS), computed via an LLM-based evaluator, to systematically degrade the certainty of answers while maintaining high retrieval success. Extensive experiments across multiple RAG configurations and benchmark datasets show that DEJA consistently drives responses toward low-utility soft failures, achieving SASR above 79\% while keeping hard-failure rates below 15\%, significantly outperforming prior attacks. The resulting adversarial documents exhibit high stealth, evading perplexity-based detection and resisting query paraphrasing, and transfer across model families to proprietary systems without retargeting.

cs.CR

Community-Level Modeling of Gyral Folding Patterns for Robust and Anatomically Informed Individualized Brain Mapping

Cortical folding exhibits substantial inter-individual variability while preserving stable anatomical landmarks that enable fine-scale characterization of cortical organization. Among these, the three-hinge gyrus (3HG) serves as a key folding primitive, showing consistent topology yet meaningful variations in morphology, connectivity, and function. Existing landmark-based methods typically model each 3HG independently, ignoring that 3HGs form higher-order folding communities that capture mesoscale structure. This simplification weakens anatomical representation and makes one-to-one matching sensitive to positional variability and noise. We propose a spectral graph representation learning framework that models community-level folding units rather than isolated landmarks. Each 3HG is encoded using a dual-profile representation combining surface topology and structural connectivity. Subject-specific spectral clustering identifies coherent folding communities, followed by topological refinement to preserve anatomical continuity. For cross-subject correspondence, we introduce Joint Morphological-Geometric Matching, jointly optimizing geometric and morphometric similarity. Across over 1000 Human Connectome Project subjects, the resulting communities show reduced morphometric variance, stronger modular organization, improved hemispheric consistency, and superior alignment compared with atlas-based and landmark-based or embedding-based baselines. These findings demonstrate that community-level modeling provides a robust and anatomically grounded framework for individualized cortical characterization and reliable cross-subject correspondence.

q-bio.NC

Attention Distance: A Novel Metric for Directed Fuzzing with Large Language Models

In the domain of software security testing, Directed Grey-Box Fuzzing (DGF) has garnered widespread attention for its efficient target localization and excellent detection performance. However, existing approaches measure only the physical distance between seed execution paths and target locations, overlooking logical relationships among code segments. This omission can yield redundant or misleading guidance in complex binaries, weakening DGF's real-world effectiveness. To address this, we introduce \textbf{attention distance}, a novel metric that leverages a large language model's contextual analysis to compute attention scores between code elements and reveal their intrinsic connections. Under the same AFLGo configuration -- without altering any fuzzing components other than the distance metric -- replacing physical distances with attention distances across 38 real vulnerability reproduction experiments delivers a \textbf{3.43$\times$} average increase in testing efficiency over the traditional method. Compared to state-of-the-art directed fuzzers DAFL and WindRanger, our approach achieves \textbf{2.89$\times$} and \textbf{7.13$\times$} improvements, respectively. To further validate the generalizability of attention distance, we integrate it into DAFL and WindRanger, where it also consistently enhances their original performance. All related code and datasets are publicly available at https://github.com/TheBinKing/Attention\_Distance.git.

cs.SE

SimWorld-Robotics: Synthesizing Photorealistic and Dynamic Urban Environments for Multimodal Robot Navigation and Collaboration

Recent advances in foundation models have shown promising results in developing generalist robotics that can perform diverse tasks in open-ended scenarios given multimodal inputs. However, current work has been mainly focused on indoor, household scenarios. In this work, we present SimWorld-Robotics~(SWR), a simulation platform for embodied AI in large-scale, photorealistic urban environments. Built on Unreal Engine 5, SWR procedurally generates unlimited photorealistic urban scenes populated with dynamic elements such as pedestrians and traffic systems, surpassing prior urban simulations in realism, complexity, and scalability. It also supports multi-robot control and communication. With these key features, we build two challenging robot benchmarks: (1) a multimodal instruction-following task, where a robot must follow vision-language navigation instructions to reach a destination in the presence of pedestrians and traffic; and (2) a multi-agent search task, where two robots must communicate to cooperatively locate and meet each other. Unlike existing benchmarks, these two new benchmarks comprehensively evaluate a wide range of critical robot capacities in realistic scenarios, including (1) multimodal instructions grounding, (2) 3D spatial reasoning in large environments, (3) safe, long-range navigation with people and traffic, (4) multi-robot collaboration, and (5) grounded communication. Our experimental results demonstrate that state-of-the-art models, including vision-language models (VLMs), struggle with our tasks, lacking robust perception, reasoning, and planning abilities necessary for urban environments.

cs.AI

SimWorld: An Open-ended Realistic Simulator for Autonomous Agents in Physical and Social Worlds

While LLM/VLM-powered AI agents have advanced rapidly in math, coding, and computer use, their applications in complex physical and social environments remain challenging. Building agents that can survive and thrive in the real world (for example, by autonomously earning income or running a business) requires massive-scale interaction, reasoning, training, and evaluation across diverse embodied scenarios. However, existing world simulators for such development fall short: they often rely on limited hand-crafted environments, simulate simplified game-like physics and social rules, and lack native support for LLM/VLM agents. We introduce SimWorld, a new simulator built on Unreal Engine 5, designed for developing and evaluating LLM/VLM agents in rich, real-world-like settings. SimWorld offers three core capabilities: (1) realistic, open-ended world simulation, including accurate physical and social dynamics and language-driven procedural environment generation; (2) a rich interface for LLM/VLM agents, with multimodal world inputs and open-vocabulary actions at varying levels of abstraction; and (3) diverse and extensible physical and social reasoning scenarios that are easily customizable by users. We demonstrate SimWorld by deploying frontier LLM agents (e.g., GPT-4o, Gemini-2.5-Flash, Claude-3.5, and DeepSeek-Prover-V2) on long-horizon multi-agent delivery tasks involving strategic cooperation and competition. The results reveal distinct reasoning patterns and limitations across models. We open-source SimWorld and hope it becomes a foundational platform for advancing real-world agent intelligence across disciplines: https://simworld.org.

cs.AI

TMDC: A Two-Stage Modality Denoising and Complementation Framework for Multimodal Sentiment Analysis with Missing and Noisy Modalities

Multimodal Sentiment Analysis (MSA) aims to infer human sentiment by integrating information from multiple modalities such as text, audio, and video. In real-world scenarios, however, the presence of missing modalities and noisy signals significantly hinders the robustness and accuracy of existing models. While prior works have made progress on these issues, they are typically addressed in isolation, limiting overall effectiveness in practical settings. To jointly mitigate the challenges posed by missing and noisy modalities, we propose a framework called Two-stage Modality Denoising and Complementation (TMDC). TMDC comprises two sequential training stages. In the Intra-Modality Denoising Stage, denoised modality-specific and modality-shared representations are extracted from complete data using dedicated denoising modules, reducing the impact of noise and enhancing representational robustness. In the Inter-Modality Complementation Stage, these representations are leveraged to compensate for missing modalities, thereby enriching the available information and further improving robustness. Extensive evaluations on MOSI, MOSEI, and IEMOCAP demonstrate that TMDC consistently achieves superior performance compared to existing methods, establishing new state-of-the-art results.

cs.MM

Utility of Pancreas Surface Lobularity as a CT Biomarker for Opportunistic Screening of Type 2 Diabetes

Type 2 Diabetes Mellitus (T2DM) is a chronic metabolic disease that affects millions of people worldwide. Early detection is crucial as it can alter pancreas function through morphological changes and increased deposition of ectopic fat, eventually leading to organ damage. While studies have shown an association between T2DM and pancreas volume and fat content, the role of increased pancreatic surface lobularity (PSL) in patients with T2DM has not been fully investigated. In this pilot work, we propose a fully automated approach to delineate the pancreas and other abdominal structures, derive CT imaging biomarkers, and opportunistically screen for T2DM. Four deep learning-based models were used to segment the pancreas in an internal dataset of 584 patients (297 males, 437 non-diabetic, age: 45$\pm$15 years). PSL was automatically detected and it was higher for diabetic patients (p=0.01) at 4.26 $\pm$ 8.32 compared to 3.19 $\pm$ 3.62 for non-diabetic patients. The PancAP model achieved the highest Dice score of 0.79 $\pm$ 0.17 and lowest ASSD error of 1.94 $\pm$ 2.63 mm (p$<$0.05). For predicting T2DM, a multivariate model trained with CT biomarkers attained 0.90 AUC, 66.7\% sensitivity, and 91.9\% specificity. Our results suggest that PSL is useful for T2DM screening and could potentially help predict the early onset of T2DM.

cs.CV

Optimizing Storage Overhead of User Behavior Log for ML-embedded Mobile Apps

Machine learning (ML) models are increasingly integrated into modern mobile apps to enable personalized and intelligent services. These models typically rely on rich input features derived from historical user behaviors to capture user intents. However, as ML-driven services become more prevalent, recording necessary user behavior data imposes substantial storage cost on mobile apps, leading to lower system responsiveness and more app uninstalls. To address this storage bottleneck, we present AdaLog, a lightweight and adaptive system designed to improve the storage efficiency of user behavior log in ML-embedded mobile apps, without compromising model inference accuracy or latency. We identify two key inefficiencies in current industrial practices of user behavior log: (i) redundant logging of overlapping behavior data across different features and models, and (ii) sparse storage caused by storing behaviors with heterogeneous attribute descriptions in a single log file. To solve these issues, AdaLog first formulates the elimination of feature-level redundant data as a maximum weighted matching problem in hypergraphs, and proposes a hierarchical algorithm for efficient on-device deployment. Then, AdaLog employs a virtually hashed attribute design to distribute heterogeneous behaviors into a few log files with physically dense storage. Finally, to ensure scalability to dynamic user behavior patterns, AdaLog designs an incremental update mechanism to minimize the I/O operations needed for adapting outdated behavior log. We implement a prototype of AdaLog and deploy it into popular mobile apps in collaboration with our industry partner. Evaluations on real-world user data show that AdaLog reduces behavior log size by 19% to 44% with minimal system overhead (only 2 seconds latency and 15 MB memory usage), providing a more efficient data foundation for broader adoption of on-device ML.

cs.LG

PG-CE: A Progressive Generation Dataset with Constraint Enhancement for Controllable Text Generation

With the rapid development of Large Language Models (LLMs), Controllable Text Generation (CTG) has become a critical technology for enhancing system reliability and user experience. Addressing the limitations of traditional methods, this paper proposes the PG-CE (Progressive Generation with Constraint Enhancement) approach, which decomposes CTG tasks into three steps: type prediction, constraint construction, and guided generation. This method employs constraint generation models to dynamically build multi-dimensional constraints including tone, expression style, and thematic focus to guide output. Experiments demonstrate that PG-CE significantly improves generation quality across multiple scenarios while maintaining text controllability, thematic relevance, and response practicality. The research developed a dataset containing 90,000 constraint-text pairs (with an 8:2 ratio between daily and other topics), effectively reflecting real-world application requirements.

cs.CL

Restricted Jacobi permutations

Jacobi permutations, introduced by Viennot in the context of Jacobi elliptic functions, are counted by the Euler numbers $E_{n}$ appearing in the series expansion $\sec x+\tan x=\sum_{n=0}^{\infty}E_{n}x^{n}/n!$. We conduct a systematic study of pattern avoidance in Jacobi permutations, achieving a complete enumeration of Jacobi permutations avoiding a prescribed set of length 3 patterns. In the case of a single pattern restriction, we obtain refined enumerations with respect to several permutation statistics: the number of ascents (or descents), the number of left-to-right minima, and the last letter. Bijections involving certain subfamilies of binary trees and Dyck paths, as well as generating function techniques, play important roles in our proofs.

math.CO

Bridging Brain Connectomes and Clinical Reports for Early Alzheimer's Disease Diagnosis

Integrating brain imaging data with clinical reports offers a valuable opportunity to leverage complementary multimodal information for more effective and timely diagnosis in practical clinical settings. This approach has gained significant attention in brain disorder research, yet a key challenge remains: how to effectively link objective imaging data with subjective text-based reports, such as doctors' notes. In this work, we propose a novel framework that aligns brain connectomes with clinical reports in a shared cross-modal latent space at both the subject and connectome levels, thereby enhancing representation learning. The key innovation of our approach is that we treat brain subnetworks as tokens of imaging data, rather than raw image patches, to align with word tokens in clinical reports. This enables a more efficient identification of system-level associations between neuroimaging findings and clinical observations, which is critical since brain disorders often manifest as network-level abnormalities rather than isolated regional alterations. We applied our method to mild cognitive impairment (MCI) using the ADNI dataset. Our approach not only achieves state-of-the-art predictive performance but also identifies clinically meaningful connectome-text pairs, offering new insights into the early mechanisms of Alzheimer's disease and supporting the development of clinically useful multimodal biomarkers.

cs.CV

Domain-Adaptive Diagnosis of Lewy Body Disease with Transferability Aware Transformer

Lewy Body Disease (LBD) is a common yet understudied form of dementia that imposes a significant burden on public health. It shares clinical similarities with Alzheimer's disease (AD), as both progress through stages of normal cognition, mild cognitive impairment, and dementia. A major obstacle in LBD diagnosis is data scarcity, which limits the effectiveness of deep learning. In contrast, AD datasets are more abundant, offering potential for knowledge transfer. However, LBD and AD data are typically collected from different sites using different machines and protocols, resulting in a distinct domain shift. To effectively leverage AD data while mitigating domain shift, we propose a Transferability Aware Transformer (TAT) that adapts knowledge from AD to enhance LBD diagnosis. Our method utilizes structural connectivity (SC) derived from structural MRI as training data. Built on the attention mechanism, TAT adaptively assigns greater weights to disease-transferable features while suppressing domain-specific ones, thereby reducing domain shift and improving diagnostic accuracy with limited LBD data. The experimental results demonstrate the effectiveness of TAT. To the best of our knowledge, this is the first study to explore domain adaptation from AD to LBD under conditions of data scarcity and domain shift, providing a promising framework for domain-adaptive diagnosis of rare diseases.

cs.LG

TestAgent: An Adaptive and Intelligent Expert for Human Assessment

Accurately assessing internal human states is key to understanding preferences, offering personalized services, and identifying challenges in real-world applications. Originating from psychometrics, adaptive testing has become the mainstream method for human measurement and has now been widely applied in education, healthcare, sports, and sociology. It customizes assessments by selecting the fewest test questions . However, current adaptive testing methods face several challenges. The mechanized nature of most algorithms leads to guessing behavior and difficulties with open-ended questions. Additionally, subjective assessments suffer from noisy response data and coarse-grained test outputs, further limiting their effectiveness. To move closer to an ideal adaptive testing process, we propose TestAgent, a large language model (LLM)-powered agent designed to enhance adaptive testing through interactive engagement. This is the first application of LLMs in adaptive testing. TestAgent supports personalized question selection, captures test-takers' responses and anomalies, and provides precise outcomes through dynamic, conversational interactions. Experiments on psychological, educational, and lifestyle assessments show our approach achieves more accurate results with 20% fewer questions than state-of-the-art baselines, and testers preferred it in speed, smoothness, and other dimensions.

cs.AI

am-ELO: A Stable Framework for Arena-based LLM Evaluation

Arena-based evaluation is a fundamental yet significant evaluation paradigm for modern AI models, especially large language models (LLMs). Existing framework based on ELO rating system suffers from the inevitable instability problem due to ranking inconsistency and the lack of attention to the varying abilities of annotators. In this paper, we introduce a novel stable arena framework to address these issues by enhancing the ELO Rating System. Specifically, we replace the iterative update method with a Maximum Likelihood Estimation (MLE) approach, m-ELO, and provide theoretical proof of the consistency and stability of the MLE approach for model ranking. Additionally, we proposed the am-ELO, which modify the Elo Rating's probability function to incorporate annotator abilities, enabling the simultaneous estimation of model scores and annotator reliability. Experiments demonstrate that this method ensures stability, proving that this framework offers a more robust, accurate, and stable evaluation method for LLMs.

cs.AI

Benchmarking Multi-Organ Segmentation Tools for Multi-Parametric T1-weighted Abdominal MRI

The segmentation of multiple organs in multi-parametric MRI studies is critical for many applications in radiology, such as correlating imaging biomarkers with disease status (e.g., cirrhosis, diabetes). Recently, three publicly available tools, such as MRSegmentator (MRSeg), TotalSegmentator MRI (TS), and TotalVibeSegmentator (VIBE), have been proposed for multi-organ segmentation in MRI. However, the performance of these tools on specific MRI sequence types has not yet been quantified. In this work, a subset of 40 volumes from the public Duke Liver Dataset was curated. The curated dataset contained 10 volumes each from the pre-contrast fat saturated T1, arterial T1w, venous T1w, and delayed T1w phases, respectively. Ten abdominal structures were manually annotated in these volumes. Next, the performance of the three public tools was benchmarked on this curated dataset. The results indicated that MRSeg obtained a Dice score of 80.7 $\pm$ 18.6 and Hausdorff Distance (HD) error of 8.9 $\pm$ 10.4 mm. It fared the best ($p < .05$) across the different sequence types in contrast to TS and VIBE.

cs.CV