arXiv subjects

Yaping Peng

Publications and source records attributed to Yaping Peng.

15 recordsLinked to original sources

arXiv2026

The ALMA-QUARKS Survey: Properties of Hot Molecular Fragments in the Massive Protocluster IRAS 17233-3606

To investigate the physical mechanisms of fragmentation within the hot molecular core of the massive protocluster IRAS 17233-3606 (G351.78-0.54), we carried out a detailed analysis of continuum and lines, using the ALMA Band 3 data from the ATOMS survey and Band 6 data from the QUARKS survey. The low-resolution 3 mm data reveal a massive hot core MM1 with a mass of ~81.3 Msun, and a prominent ultracompact (UC) HII region MM2, while the high-resolution data resolve MM1 into 11 hot molecular fragments (HMFs). These HMFs exhibit hot (Trot = 100-310 K) CH3CN and CH3OH emission and high column densities (NH2 > 10^23 cm^-2), indicating their potential to form massive stars. Based on outflows, masers, HII regions, and f[CH3CN/CH3O] abundance ratios, the evolutionary sequences of the 11 HMFs are categorized as phases I to IV. The mean minimum-spanning tree (MST) separation (~1.8 x 10^3 au) of the HMFs is nearly half of the thermal Jeans length (~3.3 x 10^3 au). Together with the Q parameter Q = 0.77 and virial parameter alpha_vir = 0.84 of MM1, these results suggest an evolutionary scenario in which fragmentation is initially driven by thermal instability, followed by global gravitational contraction and growth through active accretion. Meanwhile, feedback from the B2-type zero-age main-sequence (ZAMS) star and the UC HII region significantly influence the morphology and chemical properties of MM1 and MM2. This heterogeneity highlights the role of diverse physical processes taking place in high-mass protoclusters.

astro-ph.GA↗

arXiv2026

Probing Star-Forming Properties via ALMA Observations of Massive Protocluster IRAS 15596-5301

To deepen our understanding of star-forming properties, we studied a massive protocluster IRAS 15596-5301 using ALMA 870 um and 3 mm data. High-resolution 870 um data reveal 34 dense cores, including 3 hot molecular cores, with subsequent line surveys detecting 22 molecular species toward them. Two velocity components (I15596-red/I15596-blue) were found in the averaged H13CO+(1-0) spectrum, and two filaments were identified from velocity-resolved integrated intensity maps. A spatial overlap between the two filaments was observed, and this overlapping region exhibits a distinct bridge-shaped feature in the position-velocity diagram constructed along the entire filamentary structures. Combined with the reduced H13CO+/HCO+ ratio in the overlapping region and the three-dimensional position-position-velocity cube data, we conclude that a non-head-on collision occurs between the edges of the two filamentary structures in IRAS 15596-5301. Cluster analysis demonstrates that clusters located in the collision region host more evolved chemical rich dense cores than their counterparts in other regions. Our results thus indicate that star formation in I15596 is triggered or accelerated by a mild non-head-on collision between two filaments.

astro-ph.GA↗

arXiv2026

The ALMA-ATOMS survey: Methanol emission in a large sample of hot molecular cores

Methanol (CH$_{3}$OH) is a key complex organic molecule (COM) in the interstellar medium, widely used as a tracer of dense gas and hot molecular cores (HMCs). Using high-resolution ALMA observations from the ATOMS survey, we investigate the excitation and abundance of methanol nuclear spin isomers and their relationship to chemical complexity in massive star-forming cores. We identify 20 methanol transitions, including A- and E-type lines in the v=0 state and E-type lines in the v$_{t}$=1 state, and detect 94 HMC candidates. Rotational temperature analysis under the LTE assumption yields average values of 194 $\pm$ 33 K for CH$_{3}$OH-E v$_{t}$=1, 178 $\pm$ 33 K for CH$_{3}$OH-A v=0, and 75 $\pm$ 33K for CH$_{3}$OH-E v=0. Emission from COMs other than methanol is detected in 87 of the 94 cores, with the CH$_{3}$OH-E v$_{t}$=1 line intensity showing a strong correlation with the channel detection ratio (CDR). These results demonstrate that CH$_{3}$OH-E v$_{t}$=1 lines are reliable tracers of HMCs and chemical complexity, and that the CDR provides a robust indicator of molecular richness. The temperature difference between A- and E-type methanol transitions is driven by anomalously strong J(2,J-2)$-$J(-1,J-1) lines, highlighting the importance of analyzing methanol symmetry types separately.

astro-ph.GA↗

arXiv2025

pUniFind: a unified large pre-trained deep learning model pushing the limit of mass spectra interpretation

Deep learning has advanced mass spectrometry data interpretation, yet most models remain feature extractors rather than unified scoring frameworks. We present pUniFind, the first large-scale multimodal pre-trained model in proteomics that integrates end-to-end peptide-spectrum scoring with open, zero-shot de novo sequencing. Trained on over 100 million open search-derived spectra, pUniFind aligns spectral and peptide modalities via cross modality prediction and outperforms traditional engines across diverse datasets, particularly achieving a 42.6 percent increase in the number of identified peptides in immunopeptidomics. Supporting over 1,300 modifications, pUniFind identifies 60 percent more PSMs than existing de novo methods despite a 300-fold larger search space. A deep learning based quality control module further recovers 38.5 percent additional peptides including 1,891 mapped to the genome but absent from reference proteomes while preserving full fragment ion coverage. These results establish a unified, scalable deep learning framework for proteomic analysis, offering improved sensitivity, modification coverage, and interpretability.

cs.LG↗

arXiv2025

The ALMA-ATOMS survey: A sample of weak hot core candidates identified through line stacking

Hot cores represent critical astrophysical environments for high-mass star formation, distinguished by their rich spectra of organic molecular emission lines. We aim to utilize high-angular resolution molecular line data from ALMA to identify hot cores, with a particular focus on weak-emission candidates, and to provide one of the largest samples of hot core candidates. We propose to use spectral stacking and imaging techniques of complex organic molecules (COMs) in the ALMA-ATOMS survey, including line identification & weights, segmentation of line datacubes, resampling, stacking and normalization, moment 0 maps, and data analysis, to search for hot core candidates. We classify cores with dense emission of CH3OH and at least one molecule from the other six molecules as hot core candidates. In addition to the existing sample of 60 strong hot cores from the ALMA-ATOMS survey, we have detected 40 new weak candidates through stacking. All hot core candidates display compact emission from at least one of the other six COM species. For the strong sample, the stacking method provides molecular column density estimates that are consistent with previous fitting results. For the newly identified weak candidates, all species except CH3CHO show compact emission in the stacked image, which cannot be fully resolved spatially. These weak candidates exhibit column densities of COMs that are approximately one order of magnitude lower than those of the strong sample. The entire hot core sample, including the weak candidates, reveals tight correlations between the compact emission of CH3OH and other COM species, suggesting they may share a similar chemical environment for COMs, with CH3OH potentially acting as a precursor for other COMs. The molecular line stacking technique is used to identify hot core candidates in this work, leading to the identification of 40 new hot core candidates.

astro-ph.GA↗

arXiv2025

ATOMS: ALMA Three-millimeter Observations of Massive Star-forming regions -XXI. A Large-sample Observational Study of Ethanol and Dimethyl Ether in Hot Cores

Hot cores, as a stage of massive star formation, exhibit abundant line emissions of COMs. We present a deep line survey of two isomers of C$_2$H$_6$O: ethanol (C$_2$H$_5$OH; EA), and dimethyl ether (CH$_3$OCH$_3$; DE) as well as their possible precursor CH$_3$OH towards 60 hot cores by using the ALMA 3 mm line observations. EA is detected in 40 hot cores and DE is detected in 59 hot cores. Of these, EA and DE are simultaneously detected in 39 hot cores. We calculate rotation temperatures and column densities of EA and DE by using the XCLASS software. The average rotation temperature of EA is higher than that of DE, whereas the average column density of EA is lower than that of DE. Combined with previous studies of hot cores and hot corinos, we find strong column density correlations among EA and DE ($\rho$ = 0.92), EA and CH$_3$OH ($\rho$ = 0.82), as well as DE and CH$_3$OH ($\rho$ = 0.80). The column density ratios of EA/DE versus the column densities of CH$_3$OH remain nearly constant with values within ~ 1 order of magnitude. These strong correlations and the stable ratios, suggest that EA, DE, and CH$_3$OH could be chemically linked, with CH$_3$OH potentially serving as a precursor for EA and DE. Compared with chemical models, the three different warm-up timescale models result in the systematic overproduction of EA and the systematic underproduction of DE. Therefore, our large sample observations can provide crucial constraints on chemical models.

astro-ph.GA↗

arXiv2024

The ALMA-ATOMS survey: Vibrationally excited HC$_3$N lines in hot cores

Interstellar molecules are excellent tools for studying the physical and chemical environments of massive star-forming regions. In particular, vibrationally excited HC$_3$N (HC$_3$N*) lines are the key tracers for probing hot cores environments. We present the Atacama Large Millimeter/submillimeter Array (ALMA) 3 mm observations of HC$_3$N* lines in 60 hot cores, aiming to investigate how physical conditions affect the excitation of HC$_3$N* transitions. We have used the XCLASS for line identification. Under the assumption of local thermodynamic equilibrium (LTE), we derived the rotation temperature and column density of HC$_3$N* transitions in hot cores. Additionally, we calculated the H$_2$ column density and number density, along with the abundance of HC$_3$N* relative to H$_2$, to enable a comparison of the physical properties of hot cores with different numbers of HC$_3$N* states. We have detected HC$_3$N* lines in 52 hot cores, in which 29 cores showing more than one vibrationally excited state. Hot cores with higher gas temperatures have more detections of these vibrationally excited lines. The excitation of HC$_3$N* requires dense environments, with its spatial distribution influenced by the presence of UC Hii regions. The observed column density of HC$_3$N* contributes to the number of HC$_3$N* states in hot core environments. After analyzing the various factors influencing HC$_3$N* excitation in hot cores, we conclude that the excitation of HC$_3$N* is mainly driven by mid-IR pumping, while collisional excitation is ineffective.

astro-ph.GA↗

arXiv2024

A survey of sulfur-bearing molecular lines toward the dense cores in eleven massive protoclusters

Sulfur-bearing molecules are commonly detected in dense cores within star-forming regions, but the total sulfur budget is significantly low, when compared to the interstellar medium (ISM) value. The properties of sulfur-bearing molecules are not well understood due to the absence of large sample studies with uniform observational configurations. To deepen our understanding of this subject, we conducted a study using ALMA 870 \micron~observations of 11 massive protoclusters. By checking the spectra of 248 dense cores in 11 massive protoclusters, a total of 10 sulfur-bearing species (CS, SO, \htcs, NS, \sot, \ttso, \tfsot, \ttsot, \seoo, \octfs) were identified. The parameters including systemic velocities, line widths, gas temperatures, column densities, and abundances were derived. Our results indicate that SO appears to be more easily detected in a wider range of physical environments than \htcs, despite these two species show similarities in gas distributions and abundances. \tfsot~and \htcs~are good tracers of the temperature of sulfur-bearing species, in which \htcs~traces the outer warm envelope and \tfsot~is associated with high-temperature central-regions. High-mass star-forming feedback (outflow and other non-thermal motions) significantly elevates the sulfur-bearing molecular abundances and detection rates specifically for \sot~and SO. A positive correlation between the \sot~abundance increasing factor ($F$) and temperatures suggests that \sot~could serve as a sulfur reservoir on the grain mantles of dense cores and then can be desorbed from dust to gas phase as the temperature rises. This work shows the importance of a large and unbiased survey to understand the sulfur depletion in dense cores.

astro-ph.GA↗

arXiv2024

The ALMA-QUARKS survey: Detection of two extremely dense substructures in a massive prestellar core

Only a handful of massive starless core candidates have been discovered so far, but none of them have been fully confirmed. Within the MM1 clump in the filamentary infrared dark cloud G34.43+0.24 that was covered by the ALMA-ATOMS survey at Band 3 ($\sim2\arcsec$, 6000\,au) and the ALMA-QUARKS survey at Band 6 ($\sim 0.3\arcsec$, 900\,au), two prestellar core candidates MM1-C and E1 with masses of 71 and 20 \solarmass~and radii of 2100--4400\,au were discovered. The two cores show no obvious sign of star-formation activities. In particular, MM1-C is a very promising massive prestellar core candidate with a total gas mass of 71\,\solarmass. Within MM1-C, we detected two extremely dense substructures, C1 and C2, as characterized by their high densities of $\rm n_{H_2}\sim 10^{8-9} cm^{-3}$. Moreover, evidence of further fragmentation in C2 was also revealed. We have detected the primordial fragmentation in the earliest stage of massive star formation, and we speculate that MM1-C would be the birthplace of a massive multiple system. However, we cannot fully rule out the possibility that the massive prestellar core MM1-C will just form a cluster of low-mass stars if it undergoes further fragmentation.

astro-ph.GA↗

arXiv2022

Formation of hub-filament structure triggered by cloud-cloud collision in W33 complex

Hub-filament systems are suggested to be birth cradles of high-mass stars and clusters, but the formation of hub-filament structure is still unclear. Using the survey data FUGIN $^{13}$CO (1-0), C$^{18}$O (1-0), and SEDIGISM $^{13}$CO (2-1), we investigate formation of hub-filament structure in W33 complex. W33 complex consists of two colliding clouds, called W33-blue and W33-red. We decompose the velocity structures in W33-blue by fitting multiple velocity components, and find a continuous and monotonic velocity field. Virial parameters of Dendrogram structures suggest the dominance of gravity in W33-blue. The strong positive correlation between velocity dispersion and column density indicates the non-thermal motions in W33-blue may originate from gravitationally driven collapse. These signatures suggest that the filamentary structures in W33-blue result from the gravitational collapse of the compressed layer. However, the large scale velocity gradient in W33-blue may mainly originate from the cloud-cloud collision and feedback of active star formation, instead of the filament-rooted longitudinal inflow. From the above observed results, we argue that the cloud-cloud collision triggers formation of hub-filament structures in W33 complex. Meanwhile, the appearance of multiple-scale hub-filament structures in W33-blue is likely an imprint of the transition from the compressed layer to a hub-filament system.

astro-ph.GA↗

arXiv2022

ATOMS: ALMA Three-millimeter Observations of Massive Star-forming regions -- XI. From inflow to infall in hub-filament systems

We investigate the presence of hub-filament systems in a large sample of 146 active proto-clusters, using H$^{13}$CO$^{+}$ J=1-0 molecular line data obtained from the ATOMS survey. We find that filaments are ubiquitous in proto-clusters, and hub-filament systems are very common from dense core scales ($\sim$0.1 pc) to clump/cloud scales ($\sim$1-10 pc). The proportion of proto-clusters containing hub-filament systems decreases with increasing dust temperature ($T_d$) and luminosity-to-mass ratios ($L/M$) of clumps, indicating that stellar feedback from H{\sc ii} regions gradually destroys the hub-filament systems as proto-clusters evolve. Clear velocity gradients are seen along the longest filaments with a mean velocity gradient of 8.71 km s$^{-1}$pc$^{-1}$ and a median velocity gradient of 5.54 km s$^{-1}$pc$^{-1}$. We find that velocity gradients are small for filament lengths larger than $\sim$1~pc, probably hinting at the existence of inertial inflows, although we cannot determine whether the latter are driven by large-scale turbulence or large-scale gravitational contraction. In contrast, velocity gradients below $\sim$1~pc dramatically increase as filament lengths decrease, indicating that the gravity of the hubs or cores starts to dominate gas infall at small scales. We suggest that self-similar hub-filament systems and filamentary accretion at all scales may play a key role in high-mass star formation.

astro-ph.GA↗

arXiv2022

ATOMS: ALMA Three-millimeter Observations of Massive Star-forming regions -- VIII. A search for hot cores by using C$_2$H$_5$CN, CH$_3$OCHO and CH$_3$OH lines

Hot cores characterized by rich lines of complex organic molecules are considered as ideal sites for investigating the physical and chemical environments of massive star formation. We present a search for hot cores by using typical nitrogen- and oxygen-bearing complex organic molecules (C$_2$H$_5$CN, CH$_3$OCHO and CH$_3$OH), based on ALMA Three-millimeter Observations of Massive Star-forming regions (ATOMS). The angular resolutions and line sensitivities of the ALMA observations are better than 2 arcsec and 10 mJy/beam, respectively. A total of 60 hot cores are identified with 45 being newly detected, in which the complex organic molecules have high gas temperatures ($>$ 100 K) and small source sizes ($<$ 0.1 pc). So far this is the largest sample of hot cores observed with similar angular resolution and spectral coverage. The observations have also shown nitrogen and oxygen differentiation in both line emission and gas distribution in 29 hot cores. Column densities of CH$_3$OH and CH$_3$OCHO increase as rotation temperatures rise. The column density of CH$_3$OCHO correlates tightly with that of CH$_3$OH. The pathways for production of different species are discussed. Based on the spatial position difference between hot cores and UC~H{\sc ii} regions, we conclude that 24 hot cores are externally heated while the other hot cores are internally heated. The observations presented here will potentially help establish a hot core template for studying massive star formation and astrochemistry.

astro-ph.GA↗

arXiv2019

Sulfur-bearing molecules in Orion KL

We present an observational study of the sulfur (S)-bearing species towards Orion KL at 1.3 mm by combining ALMA and IRAM-30\,m single-dish data. At a linear resolution of $\sim$800 au and a velocity resolution of 1 $\mathrm{km\, s^{-1}\, }$, we have identified 79 molecular lines from 6 S-bearing species. In these S-bearing species, we found a clear dichotomy between carbon-sulfur compounds and carbon-free S-bearing species in various characteristics, e.g., line profiles, spatial morphology, and molecular abundances with respect to $\rm H_2$. Lines from the carbon-sulfur compounds (i.e., OCS, $^{13}$CS, H$_2$CS) exhibit spatial distributions concentrated around the continuum peaks and extended to the south ridge. The full width at half maximum (FWHM) linewidth of these molecular lines is in the range of 2 $\sim$ 11 $\mathrm{km\, s^{-1}\, }$. The molecular abundances of OCS and H$_2$CS decrease slightly from the cold ($\sim$68 K) to the hot ($\sim$176 K) regions. In contrast, lines from the carbon-free S-bearing species (i.e., SO$_2$, $^{34}$SO, H$_2$S) are spatially more extended to the northeast of mm4, exhibiting broader FWHM linewidths (15 $\sim$ 26 $\mathrm{km\, s^{-1}\, }$). The molecular abundances of carbon-free S-bearing species increase by over an order of magnitude as the temperature increase from 50 K to 100 K. In particular, $\mathrm{^{34}SO/^{34}SO_2}$ and $\mathrm{OCS/SO_2}$ are enhanced from the warmer regions ($>$100 K) to the colder regions ($\sim$50 K). Such enhancements are consistent with the transformation of SO$_2$ at warmer regions and the influence of shocks.

astro-ph.SR↗

arXiv2018

ALMA Observations of Ethyl Formate toward Orion KL

Orion KL is one of the prime templates of astrochemical and prebiotic chemical studies. We wish to explore more organic molecules with increasing complexity in this region. In particular, we have searched for one of the most complex organic molecules detected in space so far, ethyl formate (C$_{2}$H$_{5}$OCHO). This species is the next step in chemical complexity after the simplest member of esters (methyl formate, CH$_{3}$OCHO). The mechanisms leading to its formation are still poorly known. We have used high angular resolution ($\sim$ 1.$^{\prime\prime}$5) ALMA observations covering a large bandwidth from 214 to 247 GHz. We have detected 82 unblended lines of C$_{2}$H$_{5}$OCHO (49 and 33 of the trans and gauche conformers, respectively). The line images showed that C$_{2}$H$_{5}$OCHO arises mainly from the compact ridge and the hot core-southwest regions. The derived rotational temperatures and column densities are 122 $\pm$ 34 K, (0.9 $\pm$ 0.3) $\times$ 10$^{16}$ cm$^{-2}$ for the hot core-SW, and 103 $\pm$ 13 K, (0.6 $\pm$ 0.3) $\times$ 10$^{16}$ cm$^{-2}$ for the compact ridge. The comparison of spatial distribution and abundance ratios with chemically related molecules (methyl formate, ethanol and formic acid) indicates that C$_{2}$H$_{5}$OCHO is likely formed on the surface of dust grains by addition of CH$_{3}$ to functional-group radicals (CH$_{2}$OCHO) derived from methyl formate (CH$_{3}$OCHO).

astro-ph.SR↗

arXiv2015

Complex molecules in W51 North region

We present Submillimeter Array (SMA) molecular line observations in two 2 GHz-wide bands centered at 217.5 and 227.5 GHz, toward the massive star forming region W51 North. We identified 84 molecular line transitions from 17 species and their isotopologues. The molecular gas distribution of these lines mainly peaks in the continuum position of W51 North, and has a small tail extending to the west, probably associated with W51 d2. In addition to the commonly detected nitrogen and oxygen-bearing species, we detected a large amount of transitions of the Acetone (CH$_3$COCH$_3$) and Methyl Formate (CH$_3$OCHO), which may suggest that these molecules are present in an early evolutionary stage of the massive stars. We also found that W51 North is an ethanol-rich source. There is no obvious difference in the molecular gas distributions between the oxygen-bearing and nitrogen-bearing molecules. Under the assumption of Local Thermodynamic Equilibrium (LTE), with the XCLASS tool, the molecular column densities, and rotation temperatures are estimated. We found that the oxygen-bearing molecules have considerable higher column densities and fractional abundances than the nitrogen-bearing molecules. The rotation temperatures range from 100 to 200 K, suggesting that the molecular emission could be originated from a warm environment. Finally, based on the gas distributions, fractional abundances and the rotation temperatures, we conclude that CH$_3$OH, C$_2$H$_5$OH, CH$_3$COCH$_3$ and CH$_3$CH$_2$CN might be synthesized on the grain surface, while gas phase chemistry is responsible for the production of CH$_3$OCH$_3$, CH$_3$OCHO and CH$_2$CHCN.

astro-ph.GA↗