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Yifei Wang

Publications and source records attributed to Yifei Wang.

At least 55 records · Page 3Linked to original sources

Beyond Spectral Decomposition: Bayesian Contrastive Learning and its Non-negative Formulation via Factor Analysis

Factor analysis, often regarded as a Bayesian variant of matrix factorization, offers superior capabilities in capturing uncertainty, modeling complex dependencies, and ensuring robustness. As the deep learning era arrives, factor analysis is receiving less and less attention due to their limited expressive ability. On the contrary, contrastive learning has emerged as a potent technique with demonstrated efficacy in unsupervised representational learning. While the two methods are different paradigms, recent theoretical analysis has revealed the mathematical equivalence between contrastive learning and matrix factorization, providing a potential possibility for factor analysis combined with contrastive learning. Motivated by the interconnectedness of contrastive learning, matrix factorization, and factor analysis, this paper introduces a novel Contrastive Factor Analysis framework, aiming to leverage factor analysis's advantageous properties within the realm of contrastive learning. To further leverage the interpretability properties of non-negative factor analysis, which can learn disentangled representations, contrastive factor analysis is extended to a non-negative version. Finally, extensive experimental validation showcases the efficacy of the proposed contrastive (non-negative) factor analysis methodology across multiple key properties, including expressiveness, robustness, interpretability, and accurate uncertainty estimation.

cs.LG↗

An Expectation-Maximization Algorithm for Training Clean Diffusion Models from Corrupted Observations

Diffusion models excel in solving imaging inverse problems due to their ability to model complex image priors. However, their reliance on large, clean datasets for training limits their practical use where clean data is scarce. In this paper, we propose EMDiffusion, an expectation-maximization (EM) approach to train diffusion models from corrupted observations. Our method alternates between reconstructing clean images from corrupted data using a known diffusion model (E-step) and refining diffusion model weights based on these reconstructions (M-step). This iterative process leads the learned diffusion model to gradually converge to the true clean data distribution. We validate our method through extensive experiments on diverse computational imaging tasks, including random inpainting, denoising, and deblurring, achieving new state-of-the-art performance.

cs.CV↗

Unbiased Diffusion Variational Inversion via Principled Posterior Matching

Existing score-based methods for inverse problems often resort to approximate minimization of the KL divergence between the inversion distribution and the Bayesian posterior. Such an approximation leads to severe mode collapse and unreliable uncertainty quantification. In this paper, we propose Principled Posterior Matching (PPM), a framework that returns to the fundamentals of variational inference, rather than using tricky approximations. Instead of relying on heuristic approximations, we rigorously formulate the exact optimization of the KL divergence via the integration of Fisher divergence. We derive a tractable, equivalent gradient form of this integral, enabling precise optimization without the biases introduced by prior approximations. Our analysis clearly reveals that the mode collapse in previous methods stems directly from this approximation gap. Supported by our theoretical solution, PPM unifies two complementary paradigms: (1) In variational inference, PPM adopts mass-covering divergences that significantly improve the inversion diversity and uncertainty quantification; (2) In amortized inference, it enables the training of an efficient reconstruction network for rapid, single-step reconstruction. Furthermore, our formulation naturally extends to a broader family of divergence measures by generalizing the integral of the Fisher divergence. We validate PPM across challenging computational imaging tasks, including inpainting, super-resolution fluorescent microscopy, and radio interferometric black-hole imaging. In all experiments, PPM achieves superior reconstruction fidelity, faithful multimodal posterior recovery, and well-calibrated uncertainty estimates, establishing a robust framework for scientific imaging.

cs.CV↗

On the Position Bias of On-Policy Distillation

On-Policy Distillation (OPD) improves the learning efficiency of standard reinforcement learning through dense, token-level supervision from teachers. In the standard KL objective of OPD, token-level losses are uniformly averaged, implying equal weights for all tokens. However, we discover that not all tokens are created equal: as student rollouts grow longer, they deviate further from the teacher's distribution, leading to degraded supervision quality at later positions. As a result, OPD using only the first 30% of tokens can perform comparably to using all tokens, whereas OPD using only the last 30% of tokens barely learns anything. In this work, we provide a principled understanding of this issue through the lens of constrained optimization. Based on these insights, we derive Importance-Weighted On-Policy Distillation (IW-OPD), in which the weight assigned to each token depends on the accumulated discrepancy between the student's and teacher's distributions, naturally upweighting earlier tokens and downweighting later ones with larger deviations. We show that IW-OPD converges significantly faster than OPD, with better learning efficiency, and achieves better final performance than standard OPD in both same-size and cross-scale settings, improving performance up to 6.9 points on AIME-2025.

cs.LG↗

CodeTeam: An LLM-Powered Multi-Agent Framework for Repository-Level Code Generation

Natural language to repository generation (NL2Repo) requires a system to construct an entire software repository from a natural-language requirements document. Compared with function-level code generation, this task demands longer planning horizons, stable interfaces across files, and iterative debugging of cross-file inconsistencies. To address these challenges, we propose CodeTeam, an LLM-based multi-agent framework that separates planning, decision making, and implementation into distinct, coordinated stages. In the planning stage, multiple Architect agents draft competing software design sketches (SDS), optionally grounded by retrieved design references. A CTO agent then evaluates, selects, and normalizes the most promising SDS into a machine-checkable contract that specifies file ownership, public interfaces, and dependency constraints. In the implementation stage, Developer agents generate code under a dependency-aware scheduler with bounded context and lightweight Git-based coordination, while a QA agent runs tests and drives iterative repairs. On the synthesis-based SketchEval benchmark, we explicitly compare CodeTeam's prompt-engineering (PE) and supervised fine-tuning (SFT) variants with the corresponding CodeS variants, where CodeTeam improves the overall SketchBLEU by 4.1 and 2.9 absolute points, respectively. On the execution-based NL2Repo-Bench benchmark, used as an external validation protocol, CodeTeam achieves the highest average test pass rate in both settings (34.6% PE, 42.3% SFT), confirming that the sketch-improvements extend to functional correctness under upstream test suites. Ablation results show that project-specific developer allocation and retrieval-augmented planning each contribute substantially to the SketchBLEU improvement (9.9% and 8.1% relative, respectively). CodeTeam and the experimental results are available at https://github.com/WhitenWhiten/CodeTeam

cs.SE↗

Beyond the Next Step: Variable-Length Latent World Models for Long-Horizon Planning

Recently, world models have emerged as a promising paradigm for building intelligent agents by learning predictive models that estimate future environment states conditioned on observations and actions. In particular, JEPA-style latent world models provide an efficient alternative to pixel space prediction by learning action-conditioned dynamics in compact representation spaces. However, existing latent world models typically rely on one-step prediction and must be recursively rolled out for long-horizon planning, which leads to compounding errors and a mismatch between training objectives and downstream planning tasks. To address this limitation, we propose Variable-length Latent World Models (VLWMs), a framework that learns to predict future latent states conditioned on action sequences of variable lengths. Instead of training only on one-step transitions, VLWMs directly model temporally extended dynamics, allowing the same predictor to evaluate action plans over different horizons. We further introduce a curriculum training strategy that progressively expands the action horizon, stabilizing optimization from short-range dynamics to long-range prediction. At test time, we design planning methods tailored to VLWMs to better exploit their variable-length predictive capabilities. Experiments on long-horizon control tasks show that VLWMs significantly improve latent space world models, achieving 13\% average improvement over the state-of-the-art LeWM across different datasets, with especially large gains on tasks requiring extended planning. These results suggest that VLWM provides a simple yet effective paradigm for improving long-horizon prediction and planning in latent world models.

cs.LG↗

MARS: Efficient, Adaptive Co-Scheduling for Heterogeneous Agentic Systems

Large language models (LLMs) are increasingly deployed as the execution core of autonomous agents rather than as standalone text generators. Agentic workloads induce a temporal shift from single-turn inference to multi-turn LLM-tool loops, and a spatial shift from chat-scale, GPU-only execution to repository-scale, GPU-CPU co-located execution. Consequently, coordinating heterogeneous resource demands of agentic execution has emerged as a critical system challenge. We design and implement MARS, an efficient and adaptive co-scheduling system that globally coordinates heterogeneous agentic workloads under coupled GPU-CPU resource pressure. By establishing holistic visibility across GPU inference and CPU tool execution via a unified information stream, an external control plane in MARS decouples admission from execution to prevent heterogeneous resource oversubscription. An internal agent-centric scheduler further minimizes the end-to-end critical path by prioritizing latency-sensitive continuations and adaptively retaining KV cache state only when warm resumption yields a latency benefit. Our evaluations show that MARS reduces end-to-end latency by up to 5.94x while maintaining nearly maximal system throughput. We further integrate MARS as the serving backend for the OpenHands coding agent framework, demonstrating its real-world effectiveness by accelerating end-to-end task completion time by up to 1.87x. Our source code is publicly available at https://github.com/Afterglow231/MARS_preview .

cs.OS↗

SurroundNEXO: Ego-Centric Metric Bridging for Spatially Consistent Geometry in Autonomous Driving

Modern autonomous driving depends on accurate metric 3D understanding for perception, reconstruction, and planning, which in turn requires reliable multi-camera depth prediction. However, the outward-facing nature of vehicle-mounted surround-view camera rigs inherently limits visual overlap across views, challenging the correspondence-based assumptions that underpin conventional multi-view geometry. To bridge this gap, we present SurroundNEXO, named after the Spanish word nexo for a geometric link, a low-overlap multi-camera metric depth framework that grounds cross-view reasoning in ego-centric geometry rather than dense visual correspondences. Instead of directly enforcing early global fusion, SurroundNEXO first assigns image tokens globally comparable ego-frame viewing directions through Ego-Ray Positional Encoding, then uses sparse LiDAR measurements as metric anchors to propagate absolute scale cues, and finally expands feature interaction progressively from view-local modeling to decomposed spatio-temporal reasoning and global integration. This design enables metric-scale depth prediction with improved spatial consistency across weakly overlapping cameras. Across low-overlap autonomous driving benchmarks, including NuScenes, Waymo and DDAD, SurroundNEXO reduces single-view error by 33.2%, improves cross-view consistency by 10.5%, and enhances metric reconstruction quality by 25.6% compared with SOTA methods. It further remains robust under extremely sparse depth prompts and exhibits strong zero-shot generalization to unseen camera layouts.

cs.CV↗

Advancing Ligand-based Virtual Screening and Molecular Generation with Pretrained Molecular Embedding Distance

Molecular similarity plays a central role in ligand-based drug discovery, such as virtual screening, analog searching, and goal-directed molecular generation. However, traditional similarity measures, ranging from fingerprint-based Tanimoto coefficients to 3D shape overlays, are often computationally expensive at scale or rely on hand-crafted molecular descriptors. Meanwhile, many deep learning approaches to similarity-aware design still depend on similarity-specific supervision or costly data curation, limiting their generality across targets. In this work, we propose pretrained embedding distance (PED) as an effective alternative, computed directly from pretrained molecular models without task-specific training. Experimental results show that PED exhibits distinct correlations with traditional similarity metrics, and performs effectively in both ranking molecules for virtual screening and guiding molecular generation via reward design. These findings suggest that pretrained molecular embeddings capture rich structural information and can serve as a promising and scalable similarity measurement for modern AI-aided drug discovery.

cs.LG↗

Drive-KD: Multi-Teacher Distillation for VLMs in Autonomous Driving

Autonomous driving is an important and safety-critical task, and recent advances in LLMs/VLMs have opened new possibilities for reasoning and planning in this domain. However, large models demand substantial GPU memory and exhibit high inference latency, while conventional supervised fine-tuning (SFT) often struggles to bridge the capability gaps of small models. To address these limitations, we propose Drive-KD, a framework that decomposes autonomous driving into a "perception-reasoning-planning" triad and transfers these capabilities via knowledge distillation. We identify layer-specific attention as the distillation signal to construct capability-specific single-teacher models that outperform baselines. Moreover, we unify these single-teacher settings into a multi-teacher distillation framework and introduce asymmetric gradient projection to mitigate cross-capability gradient conflicts. Extensive evaluations validate the generalization of our method across diverse model families and scales. Experiments show that our distilled InternVL3-1B model, with ~42 times less GPU memory and ~11.4 times higher throughput, achieves better overall performance than the pretrained 78B model from the same family on DriveBench, and surpasses GPT-5.1 on the planning dimension, providing insights toward efficient autonomous driving VLMs.

cs.AI↗

Data-Driven Parameter Identification for Tumor Growth Models

Modeling tumor growth accurately is essential for understanding cancer progression and informing treatment strategies. To estimate the parameters in the tumor growth model described by a nonlinear PDE, we adopt Physics-Informed Neural Networks (PINNs) and DeepONet, which show advantages especially when the observation data is scarce and contains noise. With the help of real-life lab data, we have demonstrated the potential of applying deep learning tools to address data-driven modeling for tumor growth in biology.

math.AP↗

Drive-P2D: A Progressive Perception-to-Decision Benchmark for VLMs in Autonomous Driving

Autonomous driving requires reliable perception and safe decision-making in complex scenarios. Recent vision-language models (VLMs) demonstrate reasoning and generalization abilities, opening new possibilities for autonomous driving; however, existing benchmarks often evaluate perception and decision-making separately, limit failure analysis with choice-only formats, or introduce evaluation bias through LLM-scored long-form outputs. To address these issues, we present Drive-P2D, a progressive perception-to-decision benchmark with 6,650 questions across Object, Scene, and Decision levels. Drive-P2D adopts a separated reasoning-and-answer protocol: final answers are scored objectively, while reasoning is analyzed to identify error modes exposed along the progressive perception-to-decision chain. We evaluate mainstream VLMs across all and high-risk scenarios, and further characterize the perception-to-decision capability boundary through correlation analysis and similar-scene robustness testing. Reasoning further exposes failure modes such as logical reasoning errors and semantic feature omissions, and we train a lightweight analyzer model to automate large-scale error-mode annotation of reasoning. Together, these designs provide practical insights for building safer and more reliable VLMs for real-world autonomous driving.

cs.AI↗

Data Difficulty and the Generalization--Extrapolation Tradeoff in LLM Fine-Tuning

Data selection during supervised fine-tuning (SFT) can critically change the behavior of large language models (LLMs). Although existing work has studied the effect of selecting data based on heuristics such as perplexity, difficulty, or length, the reported findings are often inconsistent or context-dependent. In this work, we systematically study the role of data difficulty in fine-tuning from both empirical and theoretical perspectives, and find that there is no universally optimal difficulty level; rather, its effectiveness depends on the dataset size. We show that for a fixed data budget, there exists an optimal data difficulty for SFT, and that this optimal difficulty shifts toward harder data as the data budget increases. To explain this phenomenon, we conduct controlled synthetic experiments that reveal a simple underlying mechanism: the interplay between the (in-distribution) generalization gap and the extrapolation gap. We further support this mechanism through a theoretical analysis using PAC-Bayesian generalization bounds. Overall, our results clarify how data size and difficulty jointly affect the trade-off between generalization and extrapolation in SFT, providing guidance for difficulty-based data selection under certain model and data conditions.

cs.LG↗

Certifying Quantum States with Uniform Measurements

Qubit-resolved operations and measurements are required for most current quantum information processing schemes. However, these operations can be experimentally costly due to the need for local addressing, demanding significant classical control. A more resource-efficient alternative to extract information is uniform measurement, where a site-independent rotation of qubits is performed before measuring in the computational basis. This operation can be performed in parallel, or globally, in atom- and ion-based platforms, reducing resource cost and increasing fidelity. In this work, we initiate the exploration of the utility of this operation in quantum information processing. In particular, we demonstrate that uniform measurements can certify certain graph states, a family of highly entangled and broadly useful quantum states. We provide a sample-efficient certification algorithm with a proved performance guarantee, together with an experimental scheme based on analog-mode Rydberg atom arrays. Uniform measurements, therefore, allow direct and efficient characterization of quantum states on quantum platforms in a hitherto unexplored manner.

quant-ph↗

Optimus: Elastic Decoding for Efficient Diffusion LLM Serving

Large language model (LLM) serving is fundamentally limited by inefficient hardware utilization. Autoregressive (AR) decoding underutilizes GPUs due to its strictly sequential execution, while diffusion LLMs (DLLMs) improve throughput by decoding multiple tokens per iteration. However, fixed block-size diffusion decoding exhibits strong load sensitivity: large blocks exploit idle GPU resources under low load, but saturate early and incur substantial redundant computation under high load. As a result, throughput gains vanish beyond saturation, and no single decoding granularity performs well across dynamic serving workloads. We present Optimus, a serving system that enables elastic decoding for diffusion LLMs by dynamically adapting decoding granularity to runtime load. The key idea is to treat decoding granularity as a runtime control variable, balancing GPU utilization and token efficiency. Optimus combines chunked decoding, which enables fine-grained execution without retraining, with saturation-aware scheduling, a closed-loop mechanism that selects chunk sizes based on runtime conditions. Together with system-level optimizations and customized attention kernels, Optimus achieves significant performance improvements while preserving model accuracy. Experiments show that Optimus delivers up to 6.1x throughput improvement over AR decoding and 4.3x improvement over fixed-block diffusion LLM, while maintaining stable performance across diverse load regimes and improving end-to-end serving capacity under latency constraints. The source code is available at https://github.com/dubcyfor3/Optimus.

cs.DC↗

SSL4RL: Revisiting Self-supervised Learning as Intrinsic Reward for Visual-Language Reasoning

Vision-language models (VLMs) have shown remarkable abilities by integrating large language models with visual inputs. However, they often fail to utilize visual evidence adequately, either depending on linguistic priors in vision-centric tasks or resorting to textual shortcuts during reasoning. Although reinforcement learning (RL) can align models with desired behaviors, its application to VLMs has been hindered by the lack of scalable and reliable reward mechanisms. To overcome this challenge, we propose SSL4RL, a novel framework that leverages self-supervised learning (SSL) tasks as a source of verifiable rewards for RL-based fine-tuning. Our approach reformulates SSL objectives-such as predicting image rotation or reconstructing masked patches-into dense, automatic reward signals, eliminating the need for human preference data or unreliable AI evaluators. Experiments show that SSL4RL substantially improves performance on both vision-centric and vision-language reasoning benchmarks. Furthermore, through systematic ablations, we identify key factors-such as task difficulty, model scale, and semantic alignment with the target domain-that influence the effectiveness of SSL4RL tasks, offering new design principles for future work. We also demonstrate the framework's generality by applying it to graph learning, where it yields significant gains. SSL4RL establishes a versatile and effective paradigm for aligning multimodal models using verifiable, self-supervised objectives.

cs.CV↗

Taming Outlier Tokens in Diffusion Transformers

We study outlier tokens in Diffusion Transformers (DiTs) for image generation. Prior work has shown that Vision Transformers (ViTs) can produce a small number of high-norm tokens that attract disproportionate attention while carrying limited local information, but their role in generative models remains underexplored. We show that this phenomenon appears in both the encoder and denoiser of modern Representation Autoencoder (RAE)-DiT pipelines: pretrained ViT encoders can produce outlier representations, and DiTs themselves can develop internal outlier tokens, especially in intermediate layers. Moreover, simply masking high-norm tokens does not improve performance, indicating that the problem is not only caused by a few extreme values, but is more closely related to corrupted local patch semantics. To address this issue, we introduce Dual-Stage Registers (DSR), a register-based intervention for both components: trained registers when available, recursive test-time registers otherwise, and diffusion registers for the denoiser. Across ImageNet and large-scale text-to-image generation, these interventions consistently reduce outlier artifacts and improve generation quality. Our results highlight outlier-token control as an important ingredient in building stronger DiTs.

cs.CV↗

Resolving spurious topological entanglement entropy in stabilizer codes

Topological entanglement entropy (TEE) is a key diagnostic of long-range entanglement in two-dimensional gapped phases of matter, but it can suffer from spurious contributions that overestimate the total quantum dimension of the underlying topological order. In this work, we identify the microscopic origin of spurious TEE and introduce a concave partition for computing the Levin-Wen TEE of translation-invariant stabilizer codes of prime-dimensional qudits. We rigorously prove that this prescription is free of spurious contributions. As a complementary probe, we study bivariate bicycle codes on a bipartite cylinder and show that the entanglement entropy depends sensitively on the cylinder circumference, revealing topological frustration of the underlying anyons.

quant-ph↗