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Yiping Hao

Publications and source records attributed to Yiping Hao.

2 recordsLinked to original sources

Permutationally Invariant Polynomial Descriptors as Colored Multigraphs

The combinatorial explosion in monomial counts limits the extension of global permutationally invariant polynomial (PIP) potential energy surfaces to larger molecular systems. We use graph-theoretic language to reformulate PIPs as colored multigraphs and develop a series of theoretical and computational tools. First, we introduce an offline PIP generation algorithm whose cost has an upper bound independent of atom count for a fixed degree cutoff and number of element types. Second, we introduce a new online PIP evaluation algorithm, termed tensor-network descent. For the full PIP set through degree $d$ in a system of $M$ atoms, the evaluation complexity for $1\le d\le14$ is $O\!\left(f(d)M^{\left\lfloor(\sqrt{1+8d}+1)/2\right\rfloor}\right)$. At the commonly used cutoff of $d=5$, the online evaluation complexity decreases from the $M^{10}$ scaling of conventional explicit term-by-term computation to $M^3$. Numerical tests using the full PIP set through degree 5 show that our method achieves speedups of several orders of magnitude on most MD17 systems and remains computationally affordable for systems containing more than one thousand atoms. The method has a native tensor form, supports automatic differentiation, and provides a unified theoretical construction of four classes of PIP descriptors defined consistently across systems---global, atom-centered, bond-centered, and cluster-centered---establishing a representation and computational foundation for PIP potentials for large systems and for transfer across systems. Together, these results show that PIPs are neither inherently restricted to small systems nor intrinsically nontransferable.

physics.chem-ph↗

From Algebraic Completeness to Orbit Separation: Recursive Separating Invariants for Global Neural Network Potential Energy Surfaces

Permutationally invariant polynomials (PIPs) provide a systematically improvable, symmetry-preserving representation for global potential energy surfaces (PESs), but their high computational cost as neural network descriptors limits applications to large molecular systems. Fundamental invariants (FIs), which form an algebraically complete generating set, substantially reduce the number of descriptors and enable neural network PESs for larger systems. However, PES evaluation remains computationally expensive as molecular size and complexity increase. Here, we introduce recursive separating invariants (RSIs), shifting the descriptor design principle from algebraic completeness to orbit separation. RSIs are constructed systematically through correlation order and recursion depth, providing a more computationally efficient representation. Benchmarks on reactive and nonreactive systems demonstrate that RSI-based neural network (RSI-NN) PESs achieve approximately an order-of-magnitude faster evaluation than their FI-NN counterparts, with system-dependent prediction accuracy that is comparable in several cases. These results establish orbit separation as a promising principle for developing efficient symmetry-preserving descriptors for global neural network PESs.

physics.chem-ph↗