arXiv subjects

Zhouhan Lin

Publications and source records attributed to Zhouhan Lin.

At least 73 records · Page 4Linked to original sources

arXiv2024

SH2: Self-Highlighted Hesitation Helps You Decode More Truthfully

Large language models (LLMs) demonstrate great performance in text generation. However, LLMs are still suffering from hallucinations. In this work, we propose an inference-time method, Self-Highlighted Hesitation (SH2), to help LLMs decode more truthfully. SH2 is based on a simple fact rooted in information theory that for an LLM, the tokens predicted with lower probabilities are prone to be more informative than others. Our analysis shows that the tokens assigned with lower probabilities by an LLM are more likely to be closely related to factual information, such as nouns, proper nouns, and adjectives. Therefore, we propose to ''highlight'' the factual information by selecting the tokens with the lowest probabilities and concatenating them to the original context, thus forcing the model to repeatedly read and hesitate on these tokens before generation. During decoding, we also adopt contrastive decoding to emphasize the difference in the output probabilities brought by the hesitation. Experimental results demonstrate that our SH2, requiring no additional data or models, can effectively help LLMs elicit factual knowledge and distinguish hallucinated contexts. Significant and consistent improvements are achieved by SH2 for LLaMA-7b, LLaMA2-7b and Mistral-7b on multiple hallucination tasks.

cs.CL↗

arXiv2024

Leveraging Grammar Induction for Language Understanding and Generation

Grammar induction has made significant progress in recent years. However, it is not clear how the application of induced grammar could enhance practical performance in downstream tasks. In this work, we introduce an unsupervised grammar induction method for language understanding and generation. We construct a grammar parser to induce constituency structures and dependency relations, which is simultaneously trained on downstream tasks without additional syntax annotations. The induced grammar features are subsequently incorporated into Transformer as a syntactic mask to guide self-attention. We evaluate and apply our method to multiple machine translation tasks and natural language understanding tasks. Our method demonstrates superior performance compared to the original Transformer and other models enhanced with external parsers. Experimental results indicate that our method is effective in both from-scratch and pre-trained scenarios. Additionally, our research highlights the contribution of explicitly modeling the grammatical structure of texts to neural network models.

cs.CL↗

arXiv2024

Autoregressive Enzyme Function Prediction with Multi-scale Multi-modality Fusion

Accurate prediction of enzyme function is crucial for elucidating biological mechanisms and driving innovation across various sectors. Existing deep learning methods tend to rely solely on either sequence data or structural data and predict the EC number as a whole, neglecting the intrinsic hierarchical structure of EC numbers. To address these limitations, we introduce MAPred, a novel multi-modality and multi-scale model designed to autoregressively predict the EC number of proteins. MAPred integrates both the primary amino acid sequence and the 3D tokens of proteins, employing a dual-pathway approach to capture comprehensive protein characteristics and essential local functional sites. Additionally, MAPred utilizes an autoregressive prediction network to sequentially predict the digits of the EC number, leveraging the hierarchical organization of EC classifications. Evaluations on benchmark datasets, including New-392, Price, and New-815, demonstrate that our method outperforms existing models, marking a significant advance in the reliability and granularity of protein function prediction within bioinformatics.

q-bio.QM↗

arXiv2024

Critical Data Size of Language Models from a Grokking Perspective

We explore the critical data size in language models, a threshold that marks a fundamental shift from quick memorization to slow generalization. We formalize the phase transition under the grokking configuration into the Data Efficiency Hypothesis and identify data insufficiency, sufficiency, and surplus regimes in language models training dynamics. We develop a grokking configuration to reproduce grokking on simplistic language models stably by rescaling initialization and weight decay. We show that generalization occurs only when language models reach a critical size. We analyze grokking across sample-wise and model-wise, verifying the proposed data efficiency hypothesis. Our experiments reveal smoother phase transitions occurring at the critical dataset size for language datasets. As the model size increases, this critical point also becomes larger, indicating that larger models require more data. Our results deepen the understanding of language model training, offering a novel perspective on the role of data in the learning mechanism of language models.

cs.CL↗

arXiv2024

GeoGalactica: A Scientific Large Language Model in Geoscience

Large language models (LLMs) have achieved huge success for their general knowledge and ability to solve a wide spectrum of tasks in natural language processing (NLP). Due to their impressive abilities, LLMs have shed light on potential inter-discipline applications to foster scientific discoveries of a specific domain by using artificial intelligence (AI for science, AI4S). In the meantime, utilizing NLP techniques in geoscience research and practice is wide and convoluted, contributing from knowledge extraction and document classification to question answering and knowledge discovery. In this work, we take the initial step to leverage LLM for science, through a rather straightforward approach. We try to specialize an LLM into geoscience, by further pre-training the model with a vast amount of texts in geoscience, as well as supervised fine-tuning (SFT) the resulting model with our custom collected instruction tuning dataset. These efforts result in a model GeoGalactica consisting of 30 billion parameters. To our best knowledge, it is the largest language model for the geoscience domain. More specifically, GeoGalactica is from further pre-training of Galactica. We train GeoGalactica over a geoscience-related text corpus containing 65 billion tokens, preserving as the largest geoscience-specific text corpus. Then we fine-tune the model with 1 million pairs of instruction-tuning data consisting of questions that demand professional geoscience knowledge to answer. In this technical report, we will illustrate in detail all aspects of GeoGalactica, including data collection, data cleaning, base model selection, pre-training, SFT, and evaluation. We open-source our data curation tools and the checkpoints of GeoGalactica during the first 3/4 of pre-training.

cs.CL↗

arXiv2024

PaD: Program-aided Distillation Can Teach Small Models Reasoning Better than Chain-of-thought Fine-tuning

While large language models (LLMs) excel in various natural language processing tasks, their huge size and the inaccessibility of parameters present challenges for practical deployment. Previous studies try to distill task-specific ability from LLMs to smaller models, using data synthesis and chain-of-thought (CoT) fine-tuning. However, synthetic CoT data often contains faulty reasoning, which deteriorates the quality of distillation, especially in reasoning capabilities. In this work, we propose Program-aided Distillation (PaD), which introduces reasoning programs to suppress the errors in distilled data, and thus achieves better distillation quality for reasoning tasks. In PaD, we utilize the reasoning program to substitute the CoT, allowing automated error checking of synthetic data. Further, through error injecting and further training, the small distilling model could iteratively self-refine the reasoning. Moreover, we conduct a step-wise beam search by step-by-step verifying to acquire more exact reasoning chains. We evaluate PaD on arithmetic reasoning, symbolic reasoning, and general ability. Experimental results demonstrate that smaller models using PaD can not only outperform certain LLMs~(e.g., LLaMA-1 13B) but also achieve strong improvement over baselines with a significantly smaller scale of parameters and data. The source code is publicly available at https://github.com/Xuekai-Zhu/pad.

cs.CL↗

arXiv2024

Graph Parsing Networks

Graph pooling compresses graph information into a compact representation. State-of-the-art graph pooling methods follow a hierarchical approach, which reduces the graph size step-by-step. These methods must balance memory efficiency with preserving node information, depending on whether they use node dropping or node clustering. Additionally, fixed pooling ratios or numbers of pooling layers are predefined for all graphs, which prevents personalized pooling structures from being captured for each individual graph. In this work, inspired by bottom-up grammar induction, we propose an efficient graph parsing algorithm to infer the pooling structure, which then drives graph pooling. The resulting Graph Parsing Network (GPN) adaptively learns personalized pooling structure for each individual graph. GPN benefits from the discrete assignments generated by the graph parsing algorithm, allowing good memory efficiency while preserving node information intact. Experimental results on standard benchmarks demonstrate that GPN outperforms state-of-the-art graph pooling methods in graph classification tasks while being able to achieve competitive performance in node classification tasks. We also conduct a graph reconstruction task to show GPN's ability to preserve node information and measure both memory and time efficiency through relevant tests.

cs.LG↗

arXiv2023

Towards Controlled Table-to-Text Generation with Scientific Reasoning

The sheer volume of scientific experimental results and complex technical statements, often presented in tabular formats, presents a formidable barrier to individuals acquiring preferred information. The realms of scientific reasoning and content generation that adhere to user preferences encounter distinct challenges. In this work, we present a new task for generating fluent and logical descriptions that match user preferences over scientific tabular data, aiming to automate scientific document analysis. To facilitate research in this direction, we construct a new challenging dataset CTRLSciTab consisting of table-description pairs extracted from the scientific literature, with highlighted cells and corresponding domain-specific knowledge base. We evaluated popular pre-trained language models to establish a baseline and proposed a novel architecture outperforming competing approaches. The results showed that large models struggle to produce accurate content that aligns with user preferences. As the first of its kind, our work should motivate further research in scientific domains.

cs.CL↗

arXiv2023

I2SRM: Intra- and Inter-Sample Relationship Modeling for Multimodal Information Extraction

Multimodal information extraction is attracting research attention nowadays, which requires aggregating representations from different modalities. In this paper, we present the Intra- and Inter-Sample Relationship Modeling (I2SRM) method for this task, which contains two modules. Firstly, the intra-sample relationship modeling module operates on a single sample and aims to learn effective representations. Embeddings from textual and visual modalities are shifted to bridge the modality gap caused by distinct pre-trained language and image models. Secondly, the inter-sample relationship modeling module considers relationships among multiple samples and focuses on capturing the interactions. An AttnMixup strategy is proposed, which not only enables collaboration among samples but also augments data to improve generalization. We conduct extensive experiments on the multimodal named entity recognition datasets Twitter-2015 and Twitter-2017, and the multimodal relation extraction dataset MNRE. Our proposed method I2SRM achieves competitive results, 77.12% F1-score on Twitter-2015, 88.40% F1-score on Twitter-2017, and 84.12% F1-score on MNRE.

cs.AI↗

arXiv2023

Tailoring Self-Attention for Graph via Rooted Subtrees

Attention mechanisms have made significant strides in graph learning, yet they still exhibit notable limitations: local attention faces challenges in capturing long-range information due to the inherent problems of the message-passing scheme, while global attention cannot reflect the hierarchical neighborhood structure and fails to capture fine-grained local information. In this paper, we propose a novel multi-hop graph attention mechanism, named Subtree Attention (STA), to address the aforementioned issues. STA seamlessly bridges the fully-attentional structure and the rooted subtree, with theoretical proof that STA approximates the global attention under extreme settings. By allowing direct computation of attention weights among multi-hop neighbors, STA mitigates the inherent problems in existing graph attention mechanisms. Further we devise an efficient form for STA by employing kernelized softmax, which yields a linear time complexity. Our resulting GNN architecture, the STAGNN, presents a simple yet performant STA-based graph neural network leveraging a hop-aware attention strategy. Comprehensive evaluations on ten node classification datasets demonstrate that STA-based models outperform existing graph transformers and mainstream GNNs. The code is available at https://github.com/LUMIA-Group/SubTree-Attention.

cs.LG↗

arXiv2023

Document-Level Relation Extraction with Relation Correlation Enhancement

Document-level relation extraction (DocRE) is a task that focuses on identifying relations between entities within a document. However, existing DocRE models often overlook the correlation between relations and lack a quantitative analysis of relation correlations. To address this limitation and effectively capture relation correlations in DocRE, we propose a relation graph method, which aims to explicitly exploit the interdependency among relations. Firstly, we construct a relation graph that models relation correlations using statistical co-occurrence information derived from prior relation knowledge. Secondly, we employ a re-weighting scheme to create an effective relation correlation matrix to guide the propagation of relation information. Furthermore, we leverage graph attention networks to aggregate relation embeddings. Importantly, our method can be seamlessly integrated as a plug-and-play module into existing models. Experimental results demonstrate that our approach can enhance the performance of multi-relation extraction, highlighting the effectiveness of considering relation correlations in DocRE.

cs.IR↗

arXiv2023

K2: A Foundation Language Model for Geoscience Knowledge Understanding and Utilization

Large language models (LLMs) have achieved great success in general domains of natural language processing. In this paper, we bring LLMs to the realm of geoscience with the objective of advancing research and applications in this field. To this end, we present the first-ever LLM in geoscience, K2, alongside a suite of resources developed to further promote LLM research within geoscience. For instance, we have curated the first geoscience instruction tuning dataset, GeoSignal, which aims to align LLM responses to geoscience-related user queries. Additionally, we have established the first geoscience benchmark, GeoBench, to evaluate LLMs in the context of geoscience. In this work, we experiment with a complete recipe to adapt a pre-trained general-domain LLM to the geoscience domain. Specifically, we further train the LLaMA-7B model on 5.5B tokens of geoscience text corpus, including over 1 million pieces of geoscience literature, and utilize GeoSignal's supervised data to fine-tune the model. Moreover, we share a protocol that can efficiently gather domain-specific data and construct domain-supervised data, even in situations where manpower is scarce. Meanwhile, we equip K2 with the abilities of using tools to be a naive geoscience aide. Experiments conducted on the GeoBench demonstrate the effectiveness of our approach and datasets on geoscience knowledge understanding and utilization.We open-source all the training data and K2 model checkpoints at https://github.com/davendw49/k2.

cs.CL↗

arXiv2023

Few-Shot Table-to-Text Generation with Prompt Planning and Knowledge Memorization

Pre-trained language models (PLM) have achieved remarkable advancement in table-to-text generation tasks. However, the lack of labeled domain-specific knowledge and the topology gap between tabular data and text make it difficult for PLMs to yield faithful text. Low-resource generation likewise faces unique challenges in this domain. Inspired by how humans descript tabular data with prior knowledge, we suggest a new framework: PromptMize, which targets table-to-text generation under few-shot settings. The design of our framework consists of two aspects: a prompt planner and a knowledge adapter. The prompt planner aims to generate a prompt signal that provides instance guidance for PLMs to bridge the topology gap between tabular data and text. Moreover, the knowledge adapter memorizes domain-specific knowledge from the unlabelled corpus to supply essential information during generation. Extensive experiments and analyses are investigated on three open domain few-shot NLG datasets: human, song, and book. Compared with previous state-of-the-art approaches, our model achieves remarkable performance in generating quality as judged by human and automatic evaluations.

cs.CL↗

arXiv2023

Asymmetric Polynomial Loss For Multi-Label Classification

Various tasks are reformulated as multi-label classification problems, in which the binary cross-entropy (BCE) loss is frequently utilized for optimizing well-designed models. However, the vanilla BCE loss cannot be tailored for diverse tasks, resulting in a suboptimal performance for different models. Besides, the imbalance between redundant negative samples and rare positive samples could degrade the model performance. In this paper, we propose an effective Asymmetric Polynomial Loss (APL) to mitigate the above issues. Specifically, we first perform Taylor expansion on BCE loss. Then we ameliorate the coefficients of polynomial functions. We further employ the asymmetric focusing mechanism to decouple the gradient contribution from the negative and positive samples. Moreover, we validate that the polynomial coefficients can recalibrate the asymmetric focusing hyperparameters. Experiments on relation extraction, text classification, and image classification show that our APL loss can consistently improve performance without extra training burden.

cs.LG↗

arXiv2023

Text Classification in the Wild: a Large-scale Long-tailed Name Normalization Dataset

Real-world data usually exhibits a long-tailed distribution,with a few frequent labels and a lot of few-shot labels. The study of institution name normalization is a perfect application case showing this phenomenon. There are many institutions worldwide with enormous variations of their names in the publicly available literature. In this work, we first collect a large-scale institution name normalization dataset LoT-insts1, which contains over 25k classes that exhibit a naturally long-tailed distribution. In order to isolate the few-shot and zero-shot learning scenarios from the massive many-shot classes, we construct our test set from four different subsets: many-, medium-, and few-shot sets, as well as a zero-shot open set. We also replicate several important baseline methods on our data, covering a wide range from search-based methods to neural network methods that use the pretrained BERT model. Further, we propose our specially pretrained, BERT-based model that shows better out-of-distribution generalization on few-shot and zero-shot test sets. Compared to other datasets focusing on the long-tailed phenomenon, our dataset has one order of magnitude more training data than the largest existing long-tailed datasets and is naturally long-tailed rather than manually synthesized. We believe it provides an important and different scenario to study this problem. To our best knowledge, this is the first natural language dataset that focuses on long-tailed and open-set classification problems.

cs.CL↗

arXiv2023

Ordered GNN: Ordering Message Passing to Deal with Heterophily and Over-smoothing

Most graph neural networks follow the message passing mechanism. However, it faces the over-smoothing problem when multiple times of message passing is applied to a graph, causing indistinguishable node representations and prevents the model to effectively learn dependencies between farther-away nodes. On the other hand, features of neighboring nodes with different labels are likely to be falsely mixed, resulting in the heterophily problem. In this work, we propose to order the messages passing into the node representation, with specific blocks of neurons targeted for message passing within specific hops. This is achieved by aligning the hierarchy of the rooted-tree of a central node with the ordered neurons in its node representation. Experimental results on an extensive set of datasets show that our model can simultaneously achieve the state-of-the-art in both homophily and heterophily settings, without any targeted design. Moreover, its performance maintains pretty well while the model becomes really deep, effectively preventing the over-smoothing problem. Finally, visualizing the gating vectors shows that our model learns to behave differently between homophily and heterophily settings, providing an explainable graph neural model.

cs.LG↗

arXiv2022

Syntax-guided Localized Self-attention by Constituency Syntactic Distance

Recent works have revealed that Transformers are implicitly learning the syntactic information in its lower layers from data, albeit is highly dependent on the quality and scale of the training data. However, learning syntactic information from data is not necessary if we can leverage an external syntactic parser, which provides better parsing quality with well-defined syntactic structures. This could potentially improve Transformer's performance and sample efficiency. In this work, we propose a syntax-guided localized self-attention for Transformer that allows directly incorporating grammar structures from an external constituency parser. It prohibits the attention mechanism to overweight the grammatically distant tokens over close ones. Experimental results show that our model could consistently improve translation performance on a variety of machine translation datasets, ranging from small to large dataset sizes, and with different source languages.

cs.CL↗

arXiv2022

Text Editing as Imitation Game

Text editing, such as grammatical error correction, arises naturally from imperfect textual data. Recent works frame text editing as a multi-round sequence tagging task, where operations -- such as insertion and substitution -- are represented as a sequence of tags. While achieving good results, this encoding is limited in flexibility as all actions are bound to token-level tags. In this work, we reformulate text editing as an imitation game using behavioral cloning. Specifically, we convert conventional sequence-to-sequence data into state-to-action demonstrations, where the action space can be as flexible as needed. Instead of generating the actions one at a time, we introduce a dual decoders structure to parallel the decoding while retaining the dependencies between action tokens, coupled with trajectory augmentation to alleviate the distribution shift that imitation learning often suffers. In experiments on a suite of Arithmetic Equation benchmarks, our model consistently outperforms the autoregressive baselines in terms of performance, efficiency, and robustness. We hope our findings will shed light on future studies in reinforcement learning applying sequence-level action generation to natural language processing.

cs.CL↗