Characterizing Optimal Sampling of Binary Contingency Tables via the Configuration Model

Abstract

A binary contingency table is an m x n array of binary entries with prescribed row sums r=(r_1,...,r_m) and column sums c=(c_1,...,c_n). The configuration model for uniformly sampling binary contingency tables proceeds as follows. First, label N=\sum_{i=1}^{m} r_i tokens of type 1, arrange them in m cells, and let the i-th cell contain r_i tokens. Next, label another set of tokens of type 2 containing N=\sum_{j=1}^{n}c_j elements arranged in n cells, and let the j-th cell contain c_j tokens. Finally, pair the type-1 tokens with the type-2 tokens by generating a random permutation until the total pairing corresponds to a binary contingency table. Generating one random permutation takes O(N) time, which is optimal up to constant factors. A fundamental question is whether a constant number of permutations is sufficient to obtain a binary contingency table. In the current paper, we solve this problem by showing a necessary and sufficient condition so that the probability that the configuration model outputs a binary contingency table remains bounded away from 0 as N goes to \infty. Our finding shows surprising differences from recent results for binary symmetric contingency tables.