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arXiv · 2305.03598

NLI4CT: Multi-Evidence Natural Language Inference for Clinical Trial Reports

Maël Jullien·Marco Valentino·Hannah Frost·Paul O'Regan·Donal Landers·André Freitas
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Abstract

How can we interpret and retrieve medical evidence to support clinical decisions? Clinical trial reports (CTR) amassed over the years contain indispensable information for the development of personalized medicine. However, it is practically infeasible to manually inspect over 400,000+ clinical trial reports in order to find the best evidence for experimental treatments. Natural Language Inference (NLI) offers a potential solution to this problem, by allowing the scalable computation of textual entailment. However, existing NLI models perform poorly on biomedical corpora, and previously published datasets fail to capture the full complexity of inference over CTRs. In this work, we present a novel resource to advance research on NLI for reasoning on CTRs. The resource includes two main tasks. Firstly, to determine the inference relation between a natural language statement, and a CTR. Secondly, to retrieve supporting facts to justify the predicted relation. We provide NLI4CT, a corpus of 2400 statements and CTRs, annotated for these tasks. Baselines on this corpus expose the limitations of existing NLI models, with 6 state-of-the-art NLI models achieving a maximum F1 score of 0.627. To the best of our knowledge, we are the first to design a task that covers the interpretation of full CTRs. To encourage further work on this challenging dataset, we make the corpus, competition leaderboard, website and code to replicate the baseline experiments available at: https://github.com/ai-systems/nli4ct

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Maël Jullien, Marco Valentino, Hannah Frost, Paul O'Regan, Donal Landers, André Freitas. 2023-10-28. NLI4CT: Multi-Evidence Natural Language Inference for Clinical Trial Reports. https://arxiv.org/abs/2305.03598

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