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arXiv · 2511.12472

Assessing LLMs for Serendipity Discovery in Knowledge Graphs: A Case for Drug Repurposing

Mengying Wang·Chenhui Ma·Ao Jiao·Tuo Liang·Pengjun Lu·Shrinidhi Hegde·Yu Yin·Evren Gurkan-Cavusoglu·Yinghui Wu
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Abstract

Large Language Models (LLMs) have greatly advanced knowledge graph question answering (KGQA), yet existing systems are typically optimized for returning highly relevant but predictable answers. A missing yet desired capacity is to exploit LLMs to suggest surprise and novel ("serendipitious") answers. In this paper, we formally define the serendipity-aware KGQA task and propose the SerenQA framework to evaluate LLMs' ability to uncover unexpected insights in scientific KGQA tasks. SerenQA includes a rigorous serendipity metric based on relevance, novelty, and surprise, along with an expert-annotated benchmark derived from the Clinical Knowledge Graph, focused on drug repurposing. Additionally, it features a structured evaluation pipeline encompassing three subtasks: knowledge retrieval, subgraph reasoning, and serendipity exploration. Our experiments reveal that while state-of-the-art LLMs perform well on retrieval, they still struggle to identify genuinely surprising and valuable discoveries, underscoring a significant room for future improvements. Our curated resources and extended version are released at: https://cwru-db-group.github.io/serenQA.

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Mengying Wang, Chenhui Ma, Ao Jiao, Tuo Liang, Pengjun Lu, Shrinidhi Hegde, Yu Yin, Evren Gurkan-Cavusoglu, Yinghui Wu. 2025-11-16. Assessing LLMs for Serendipity Discovery in Knowledge Graphs: A Case for Drug Repurposing. https://arxiv.org/abs/2511.12472

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